Experiment set14IT008 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS07730 +2.7 1.5 iron-enterobactin transporter membrane protein compare
BWI76_RS03045 +2.6 3.9 hypothetical protein compare
BWI76_RS00140 +2.3 2.8 phosphate transport system regulator PhoU compare
BWI76_RS00865 +2.1 5.4 DNA-binding transcriptional regulator OxyR compare
BWI76_RS01585 +2.1 8.3 transcriptional regulator compare
BWI76_RS08720 +1.9 2.2 imidazolonepropionase compare
BWI76_RS13215 +1.8 2.3 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS18770 +1.8 1.5 DNA gyrase inhibitor compare
BWI76_RS20995 +1.8 5.1 RNA degradosome polyphosphate kinase compare
BWI76_RS20795 +1.7 2.0 ethanolamine catabolic microcompartment shell protein EutN compare
BWI76_RS23505 +1.7 11.6 ferrous iron transporter B compare
BWI76_RS23250 +1.7 3.6 hypothetical protein compare
BWI76_RS06540 +1.6 3.6 DNA-binding protein HU-beta compare
BWI76_RS21485 +1.6 6.9 DUF4154 domain-containing protein compare
BWI76_RS00025 +1.6 1.4 hypothetical protein compare
BWI76_RS12790 +1.5 1.1 lactate dehydrogenase compare
BWI76_RS07725 +1.5 1.3 iron-enterobactin transporter permease compare
BWI76_RS14410 +1.5 2.8 hypothetical protein compare
BWI76_RS04055 +1.5 11.3 GGDEF domain-containing protein compare
BWI76_RS03595 +1.5 2.3 ethanolamine utilization protein EutM compare
BWI76_RS16000 +1.4 1.7 multidrug transporter subunit MdtI compare
BWI76_RS12550 +1.4 1.5 hypothetical protein compare
BWI76_RS23470 +1.4 8.9 hypothetical protein compare
BWI76_RS25485 +1.4 2.0 septum formation protein Maf compare
BWI76_RS10500 +1.4 2.3 flavoprotein monooxygenase compare
BWI76_RS12825 +1.4 2.5 hypothetical protein compare
BWI76_RS14775 +1.4 1.7 creatinine amidohydrolase compare
BWI76_RS07165 +1.4 2.9 hypothetical protein compare
BWI76_RS11810 +1.4 1.6 outer membrane protein OmpW compare
BWI76_RS08585 +1.4 1.9 nicotinamide riboside transporter PnuC compare
BWI76_RS05235 +1.3 1.0 hypothetical protein compare
BWI76_RS24035 +1.3 2.6 hypothetical protein compare
BWI76_RS15435 +1.3 1.1 hypothetical protein compare
BWI76_RS21945 +1.3 2.5 LysR family transcriptional regulator compare
BWI76_RS24110 +1.3 1.2 YggU family protein compare
BWI76_RS16360 +1.3 1.0 electron transport complex subunit RsxB compare
BWI76_RS22860 +1.3 2.6 SecY-interacting protein compare
BWI76_RS13420 +1.3 1.4 ABC transporter permease compare
BWI76_RS16735 +1.3 2.2 cold-shock protein compare
BWI76_RS27945 +1.2 1.8 2-oxo-3-deoxygalactonate kinase compare
BWI76_RS10725 +1.2 1.8 hypothetical protein compare
BWI76_RS16095 +1.2 3.4 thiamine biosynthesis protein ApbE compare
BWI76_RS19240 +1.2 1.6 ABC transporter substrate-binding protein compare
BWI76_RS07705 +1.2 1.6 enterochelin esterase compare
BWI76_RS06400 +1.2 1.6 oxidative-stress-resistance chaperone compare
BWI76_RS14935 +1.2 1.1 NIPSNAP family containing protein compare
BWI76_RS10745 +1.2 0.7 hypothetical protein compare
BWI76_RS07970 +1.2 1.3 hypothetical protein compare
BWI76_RS23765 +1.2 2.5 peptidase M23 compare
BWI76_RS26285 +1.2 3.7 glycerophosphodiester phosphodiesterase compare
BWI76_RS27670 +1.2 1.7 LysR family transcriptional regulator compare
BWI76_RS04805 +1.1 2.6 8-oxo-dGTP diphosphatase compare
BWI76_RS11900 +1.1 0.8 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS19480 +1.1 1.5 transcriptional regulator compare
BWI76_RS06335 +1.1 2.5 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS04915 +1.1 3.0 hypothetical protein compare
BWI76_RS20750 +1.1 0.6 carboxysome structural protein EutK compare
BWI76_RS15920 +1.1 1.0 hypothetical protein compare
BWI76_RS23030 +1.1 1.4 cobalamin biosynthesis protein CbiM compare
BWI76_RS16795 +1.1 1.9 amino acid ABC transporter ATPase compare
BWI76_RS15850 +1.1 0.9 DUF1317 domain-containing protein compare
BWI76_RS16760 +1.1 2.4 lipase compare
BWI76_RS21490 +1.1 5.2 GGDEF domain-containing protein compare
BWI76_RS12585 +1.1 4.2 transcriptional regulator compare
BWI76_RS20960 +1.1 3.5 ROK family protein compare
BWI76_RS04895 +1.1 1.2 hypothetical protein compare
BWI76_RS05950 +1.1 1.3 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS16980 +1.1 2.0 bifunctional cysteine desulfurase/selenocysteine lyase compare
BWI76_RS01330 +1.1 1.9 twin-arginine translocase subunit TatC compare
BWI76_RS18335 +1.1 5.0 DNA-binding response regulator compare
BWI76_RS08405 +1.1 1.5 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS22960 +1.1 1.6 YgdI/YgdR family lipoprotein compare
BWI76_RS16880 +1.1 2.1 GlpE family protein compare
BWI76_RS18810 +1.0 2.1 nitrogenase iron protein compare
BWI76_RS27940 +1.0 1.8 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS06405 +1.0 1.5 2-dehydropantoate 2-reductase compare
BWI76_RS04495 +1.0 5.9 glutathione-regulated potassium-efflux system protein KefC compare
BWI76_RS11675 +1.0 1.9 arginine N-succinyltransferase compare
BWI76_RS20765 +1.0 3.6 ethanolamine ammonia lyase large subunit compare
BWI76_RS01010 +1.0 3.6 uridine phosphorylase compare
BWI76_RS10735 +1.0 1.7 hypothetical protein compare
BWI76_RS03105 +1.0 0.8 myo-inosose-2 dehydratase compare
BWI76_RS23050 +1.0 1.7 cobalt-precorrin-3B C(17)-methyltransferase compare
BWI76_RS13805 +1.0 2.8 inorganic diphosphatase compare
BWI76_RS20040 +1.0 1.6 tricarboxylic transport membrane protein compare
BWI76_RS05075 +1.0 0.6 type II secretion system protein GspG compare
BWI76_RS16055 +1.0 2.7 malonate decarboxylase subunit epsilon compare
BWI76_RS14170 +1.0 1.6 hypothetical protein compare
BWI76_RS23705 +1.0 1.3 2-deoxy-D-ribonyl-CoA 3-dehydrogenase (from data) compare
BWI76_RS07765 +1.0 1.4 thioesterase compare
BWI76_RS12875 +1.0 1.5 bifunctional deaminase-reductase compare
BWI76_RS01675 +1.0 2.0 putative cytoplasmic protein compare
BWI76_RS11350 +1.0 2.5 DeoR family transcriptional regulator compare
BWI76_RS00330 +1.0 5.5 molybdenum cofactor guanylyltransferase compare
BWI76_RS16075 +1.0 1.1 oxidoreductase compare
BWI76_RS18065 +1.0 1.1 DNA polymerase III subunit theta compare
BWI76_RS08815 +1.0 4.4 cyclic pyranopterin phosphate synthase compare
BWI76_RS07595 +1.0 1.6 putative oxidoreductase compare
BWI76_RS15330 +1.0 2.1 urea ABC transporter permease subunit UrtC compare
BWI76_RS09085 +1.0 5.9 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS03815 +1.0 2.1 hypothetical protein compare
BWI76_RS20940 +1.0 2.3 uracil/xanthine transporter compare
BWI76_RS20375 +1.0 1.0 membrane protein compare
BWI76_RS26405 +1.0 0.9 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS05895 +1.0 2.8 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS19585 +1.0 1.3 gentisate 1,2-dioxygenase compare
BWI76_RS09490 +1.0 1.7 DNA-binding response regulator compare
BWI76_RS11805 +1.0 1.9 hypothetical protein compare
BWI76_RS04360 +1.0 3.1 ribonucleoside hydrolase RihC compare
BWI76_RS24155 +1.0 2.7 A/G-specific adenine glycosylase compare
BWI76_RS13330 +1.0 0.9 tellurite resistance methyltransferase TehB compare
BWI76_RS16210 +1.0 0.7 hypothetical protein compare
BWI76_RS14930 +0.9 1.4 hypothetical protein compare
BWI76_RS11880 +0.9 2.4 23S rRNA pseudouridylate synthase B compare
BWI76_RS10470 +0.9 2.1 iron ABC transporter substrate-binding protein compare
BWI76_RS11150 +0.9 1.0 membrane protein compare
BWI76_RS13170 +0.9 1.2 methyltransferase compare
BWI76_RS09690 +0.9 1.5 dimethyl sulfoxide reductase compare
BWI76_RS11755 +0.9 2.6 catalase HPII compare
BWI76_RS04095 +0.9 1.9 dUMP phosphatase compare
BWI76_RS04275 +0.9 4.1 molybdopterin adenylyltransferase compare
BWI76_RS07920 +0.9 2.0 methionine aminotransferase compare
BWI76_RS18420 +0.9 3.3 DNA (cytosine-5-)-methyltransferase compare
BWI76_RS20090 +0.9 2.4 ribonuclease Z compare
BWI76_RS07265 +0.9 1.7 ABC transporter ATP-binding protein compare
BWI76_RS10380 +0.9 3.6 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS08395 +0.9 1.1 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS20560 +0.9 1.4 hypothetical protein compare
BWI76_RS11815 +0.9 0.7 hypothetical protein compare
BWI76_RS12665 +0.9 1.4 hypothetical protein compare
BWI76_RS24180 +0.9 0.9 hypothetical protein compare
BWI76_RS15775 +0.9 1.3 replication protein compare
BWI76_RS09710 +0.9 1.1 transketolase compare
BWI76_RS21390 +0.9 0.8 thiol disulfide reductase thioredoxin compare
BWI76_RS00825 +0.9 3.5 AraC family transcriptional regulator compare
BWI76_RS15845 +0.9 0.7 hypothetical protein compare
BWI76_RS06130 +0.9 1.5 extensin family protein compare
BWI76_RS20890 +0.9 2.9 neutral zinc metallopeptidase compare
BWI76_RS19340 +0.9 4.3 xylulokinase compare
BWI76_RS20465 +0.9 2.0 hypothetical protein compare
BWI76_RS18130 +0.9 2.5 zinc ABC transporter substrate-binding protein compare
BWI76_RS13095 +0.9 1.1 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS19695 +0.9 1.4 membrane protein compare
BWI76_RS25380 +0.9 1.6 oxaloacetate decarboxylase subunit beta compare
BWI76_RS16745 +0.9 2.7 alpha-acetolactate decarboxylase compare
BWI76_RS16445 +0.9 2.0 auxiliary transporter membrane fusion protein compare
BWI76_RS15085 +0.9 4.1 3-deoxy-D-arabinose-heptulosonic-7-phosphate synthase compare
BWI76_RS08345 +0.9 1.1 Nif3-like dinuclear metal center protein compare
BWI76_RS14805 +0.9 1.3 hypothetical protein compare
BWI76_RS12500 +0.9 1.2 dipeptide epimerase compare
BWI76_RS10895 +0.9 2.0 phosphatase compare
BWI76_RS16670 +0.9 2.7 NLPA lipoprotein compare
BWI76_RS15215 +0.9 0.5 N-acetyltransferase compare
BWI76_RS10680 +0.9 2.3 tartrate dehydrogenase compare
BWI76_RS07735 +0.9 2.6 MFS transporter compare
BWI76_RS07940 +0.9 2.6 alkyl hydroperoxide reductase subunit C compare
BWI76_RS23895 +0.9 0.5 Xaa-Pro aminopeptidase compare
BWI76_RS17065 +0.9 3.2 phosphoenolpyruvate synthase compare
BWI76_RS23465 +0.9 4.2 oxidoreductase compare
BWI76_RS25545 +0.9 1.5 hypothetical protein compare
BWI76_RS13090 +0.9 1.2 phenylacetate-CoA oxygenase subunit PaaA compare
BWI76_RS01840 +0.9 1.8 maltose ABC transporter, ATPase component (MalK) (from data) compare
BWI76_RS00590 +0.9 1.0 hypothetical protein compare
BWI76_RS13815 +0.9 2.1 ABC transporter compare
BWI76_RS19855 +0.9 1.8 AI-2E family transporter compare
BWI76_RS04560 +0.8 1.3 holo-ACP synthase CitX compare
BWI76_RS15090 +0.8 1.8 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS21130 +0.8 1.3 Fe-S assembly protein IscX compare
BWI76_RS11890 +0.8 1.3 glycosyl hydrolase compare
BWI76_RS23340 +0.8 0.7 transcriptional regulator compare
BWI76_RS19100 +0.8 4.1 putative acid phosphatase compare
BWI76_RS10530 +0.8 1.6 GntR family transcriptional regulator with compare
BWI76_RS12465 +0.8 0.8 phage shock protein D compare
BWI76_RS03515 +0.8 2.3 hypothetical protein compare
BWI76_RS17230 +0.8 1.4 peptide ABC transporter permease compare
BWI76_RS01650 +0.8 1.2 acetyltransferase compare
BWI76_RS14550 +0.8 2.7 2,3-dihydroxybenzoate-AMP ligase compare
BWI76_RS25980 +0.8 1.7 hypothetical protein compare
BWI76_RS23085 +0.8 3.4 adenosylcobinamide-phosphate synthase compare
BWI76_RS18455 +0.8 0.5 tRNA-Ser compare
BWI76_RS25245 +0.8 0.9 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS00475 +0.8 4.0 sulfurtransferase FdhD compare
BWI76_RS14980 +0.8 0.8 hypothetical protein compare
BWI76_RS01565 +0.8 1.2 NADH pyrophosphatase compare
BWI76_RS21570 +0.8 1.0 RnfH family protein compare
BWI76_RS25855 +0.8 2.2 bacterioferritin compare
BWI76_RS22945 +0.8 1.9 23S rRNA (cytidine(2498)-2'-O)-methyltransferase RlmM compare
BWI76_RS23205 +0.8 2.3 propanediol utilization protein PduX compare
BWI76_RS10355 +0.8 4.0 spermidine/putrescine ABC transporter compare
BWI76_RS04110 +0.8 2.9 DUF1328 domain-containing protein compare
BWI76_RS11915 +0.8 2.2 protease SohB compare
BWI76_RS24540 +0.8 2.3 hypothetical protein compare
BWI76_RS23190 +0.8 1.2 propanediol utilization protein PduU compare
BWI76_RS21495 +0.8 2.6 outer membrane lipoprotein compare
BWI76_RS20020 +0.8 1.4 nucleoside triphosphatase NudI compare
BWI76_RS14875 +0.8 3.5 ribokinase-like domain-containing protein compare
BWI76_RS11250 +0.8 1.1 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS06075 +0.8 1.5 taurine transporter subunit compare
BWI76_RS06545 +0.8 1.6 peptidylprolyl isomerase compare
BWI76_RS15080 +0.8 5.7 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted across organisms