Experiment set14IT006 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS18955 -7.4 -3.4 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS04250 -6.1 -5.5 homoserine kinase compare
BWI76_RS23220 -5.7 -7.8 amino-acid N-acetyltransferase compare
BWI76_RS00975 -5.5 -13.4 dihydroxy-acid dehydratase compare
BWI76_RS21350 -5.4 -3.8 anti-RNA polymerase sigma factor SigE compare
BWI76_RS25115 -5.3 -7.2 argininosuccinate synthase compare
BWI76_RS04465 -5.3 -4.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00850 -5.2 -9.4 acetylglutamate kinase compare
BWI76_RS18935 -5.2 -5.3 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS23365 -5.1 -2.8 LysR family transcriptional regulator compare
BWI76_RS00845 -5.1 -9.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00855 -5.1 -7.8 argininosuccinate lyase compare
BWI76_RS18940 -5.0 -4.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS25070 -4.9 -1.0 hypothetical protein compare
BWI76_RS16965 -4.8 -1.4 murein lipoprotein compare
BWI76_RS00805 -4.8 -4.3 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS04255 -4.7 -7.8 threonine synthase compare
BWI76_RS00990 -4.7 -9.8 ketol-acid reductoisomerase compare
BWI76_RS26455 -4.6 -1.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS26460 -4.6 -2.5 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS27915 -4.6 -1.6 YceK/YidQ family lipoprotein compare
BWI76_RS00785 -4.5 -4.0 cystathionine gamma-synthase compare
BWI76_RS22755 -4.5 -2.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS08385 -4.4 -2.2 citrate (Si)-synthase compare
BWI76_RS04470 -4.4 -9.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS14770 -4.3 -0.9 PTS IIA 2 domain protein compare
BWI76_RS26000 -4.3 -8.0 aspartate aminotransferase family protein compare
BWI76_RS18925 -4.3 -6.4 histidinol dehydrogenase compare
BWI76_RS23265 -4.2 -1.2 hypothetical protein compare
BWI76_RS20355 -4.2 -2.8 colicin V production protein compare
BWI76_RS22760 -4.2 -6.3 sulfite reductase subunit beta compare
BWI76_RS09335 -4.2 -0.9 baseplate assembly protein W compare
BWI76_RS24485 -4.2 -1.2 bifunctional dihydroneopterin aldolase/7,8-dihydroneopterin epimerase compare
BWI76_RS25280 -4.2 -0.8 RNase adaptor protein RapZ compare
BWI76_RS04670 -4.2 -9.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS01170 -4.2 -3.1 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS04665 -4.1 -22.3 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04305 -4.1 -0.8 molecular chaperone DnaJ compare
BWI76_RS03010 -4.1 -7.7 ornithine carbamoyltransferase compare
BWI76_RS15535 -4.0 -2.7 hypothetical protein compare
BWI76_RS11840 -4.0 -4.2 tryptophan synthase subunit alpha compare
BWI76_RS22690 -3.9 -1.7 adenylyl-sulfate kinase compare
BWI76_RS18920 -3.9 -2.5 ATP phosphoribosyltransferase compare
BWI76_RS04245 -3.9 -13.0 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00835 -3.8 -12.1 phosphoenolpyruvate carboxylase compare
BWI76_RS12070 -3.8 -0.8 hypothetical protein compare
BWI76_RS13755 -3.7 -1.1 hypothetical protein compare
BWI76_RS18930 -3.7 -3.8 histidinol-phosphate transaminase compare
BWI76_RS01655 -3.7 -7.7 homoserine O-succinyltransferase compare
BWI76_RS24285 -3.7 -6.5 cystathionine beta-lyase compare
BWI76_RS18950 -3.7 -3.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS07070 -3.6 -3.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21475 -3.6 -1.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS20565 -3.6 -2.1 hypothetical protein compare
BWI76_RS00980 -3.6 -10.8 PLP-dependent threonine dehydratase compare
BWI76_RS02735 -3.6 -1.7 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS11300 -3.6 -0.7 cupin compare
BWI76_RS16375 -3.6 -2.1 electron transport complex subunit G compare
BWI76_RS20350 -3.6 -6.2 amidophosphoribosyltransferase compare
BWI76_RS21565 -3.6 -0.7 outer membrane protein assembly factor BamE compare
BWI76_RS00875 -3.6 -4.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS08530 -3.6 -1.0 protein TolA compare
BWI76_RS05015 -3.5 -1.4 transcriptional regulator compare
BWI76_RS21070 -3.5 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS11635 -3.5 -1.0 ABC transporter compare
BWI76_RS04680 -3.5 -10.2 2-isopropylmalate synthase compare
BWI76_RS04675 -3.5 -5.5 3-isopropylmalate dehydrogenase compare
BWI76_RS25335 -3.4 -1.2 stringent starvation protein A compare
BWI76_RS01610 -3.4 -8.2 phosphoribosylamine--glycine ligase compare
BWI76_RS11850 -3.4 -8.8 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS10990 -3.4 -2.3 dihydroorotase compare
BWI76_RS22765 -3.4 -10.2 sulfite reductase subunit alpha compare
BWI76_RS05260 -3.3 -0.9 chaperone compare
BWI76_RS22090 -3.3 -1.6 transcriptional regulator compare
BWI76_RS21345 -3.3 -1.6 sigma-E factor regulatory protein RseB compare
BWI76_RS18605 -3.3 -1.6 oxidoreductase molybdopterin-binding protein compare
BWI76_RS27165 -3.3 -3.8 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS04160 -3.3 -2.4 phosphoserine phosphatase compare
BWI76_RS05840 -3.3 -2.4 glutamate 5-kinase compare
BWI76_RS20360 -3.2 -0.6 cell division protein DedD compare
BWI76_RS05835 -3.2 -1.3 gamma-glutamyl-phosphate reductase compare
BWI76_RS04240 -3.1 -1.4 thr operon leader peptide compare
BWI76_RS25645 -3.1 -6.1 shikimate dehydrogenase compare
BWI76_RS11845 -3.1 -1.7 tryptophan synthase subunit beta compare
BWI76_RS23920 -3.1 -1.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS21460 -3.1 -0.9 translation inhibitor protein RaiA compare
BWI76_RS08525 -3.1 -1.0 colicin transporter compare
BWI76_RS27425 -3.0 -1.0 DNA-directed RNA polymerase subunit omega compare
BWI76_RS07465 -3.0 -0.8 TetR family transcriptional regulator compare
BWI76_RS16920 -3.0 -0.8 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS00965 -2.9 -0.6 acetolactate synthase 2 small subunit compare
BWI76_RS11855 -2.9 -7.3 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS25870 -2.9 -1.0 elongation factor Tu compare
BWI76_RS04685 -2.9 -7.7 putative leucine operon leader peptide compare
BWI76_RS21075 -2.9 -1.0 membrane protein compare
BWI76_RS09755 -2.9 -1.6 phosphoserine transaminase compare
BWI76_RS11860 -2.9 -9.4 anthranilate synthase component I compare
BWI76_RS01275 -2.9 -6.2 LysR family transcriptional regulator compare
BWI76_RS16315 -2.8 -0.8 SirA-like protein compare
BWI76_RS20750 -2.8 -0.6 carboxysome structural protein EutK compare
BWI76_RS01615 -2.8 -7.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS16485 -2.8 -0.8 ribonuclease T compare
BWI76_RS20640 -2.8 -2.9 cysteine synthase A compare
BWI76_RS17980 -2.8 -3.6 RNA chaperone ProQ compare
BWI76_RS19495 -2.7 -0.8 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS08210 -2.7 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS06535 -2.7 -1.5 endopeptidase La compare
BWI76_RS08760 -2.7 -4.0 biotin synthase compare
BWI76_RS17860 -2.7 -1.3 YoaH family protein compare
BWI76_RS01800 -2.7 -1.4 glucose-6-phosphate isomerase compare
BWI76_RS10245 -2.7 -1.9 aspartate aminotransferase compare
BWI76_RS08275 -2.6 -1.5 LexA regulated protein compare
BWI76_RS16955 -2.6 -0.7 hypothetical protein compare
BWI76_RS26390 -2.6 -5.2 cell division protein FtsX compare
BWI76_RS09645 -2.6 -0.5 thioredoxin-disulfide reductase compare
BWI76_RS21265 -2.6 -13.0 phosphoribosylformylglycinamidine synthase compare
BWI76_RS09640 -2.6 -1.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS06765 -2.6 -3.0 transcriptional regulator compare
BWI76_RS20380 -2.6 -0.5 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS02995 -2.6 -6.1 aspartate carbamoyltransferase compare
BWI76_RS21580 -2.6 -0.9 SsrA-binding protein compare
BWI76_RS27385 -2.5 -6.4 orotate phosphoribosyltransferase compare
BWI76_RS03660 -2.5 -2.0 hypothetical protein compare
BWI76_RS25065 -2.5 -2.8 polyribonucleotide nucleotidyltransferase compare
BWI76_RS09195 -2.5 -0.7 N-acetyltransferase compare
BWI76_RS24270 -2.5 -1.9 membrane protein compare
BWI76_RS27310 -2.5 -15.0 glycosyltransferase compare
BWI76_RS23480 -2.5 -12.5 EAL domain-containing protein compare
BWI76_RS25700 -2.5 -3.1 heavy metal-responsive transcriptional regulator compare
BWI76_RS12420 -2.5 -0.8 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS17975 -2.5 -3.4 tail-specific protease compare
BWI76_RS04645 -2.4 -2.5 3-dehydroquinase compare
BWI76_RS21465 -2.4 -3.8 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS11430 -2.4 -0.7 lipoprotein compare
BWI76_RS22700 -2.4 -3.0 sulfate adenylyltransferase subunit 2 compare
BWI76_RS09255 -2.4 -2.2 hypothetical protein compare
BWI76_RS26665 -2.3 -1.7 DNA-binding response regulator compare
BWI76_RS21370 -2.3 -0.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS15690 -2.3 -2.2 hypothetical protein compare
BWI76_RS09910 -2.3 -10.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS22420 -2.3 -1.5 LacI family transcriptional regulator compare
BWI76_RS09970 -2.3 -0.6 porin OmpA compare
BWI76_RS09670 -2.3 -1.7 recombination factor protein RarA compare
BWI76_RS09760 -2.3 -2.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS20965 -2.2 -2.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS25960 -2.2 -2.8 NUDIX hydrolase compare
BWI76_RS00240 -2.2 -0.9 FMN-binding protein MioC compare
BWI76_RS11105 -2.2 -2.0 aminodeoxychorismate lyase compare
BWI76_RS10305 -2.2 -4.9 transposase compare
BWI76_RS19905 -2.1 -3.2 OmpK36 porin compare
BWI76_RS13560 -2.1 -0.6 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS10745 -2.1 -0.6 hypothetical protein compare
BWI76_RS25425 -2.1 -0.6 arginine repressor compare
BWI76_RS27820 -2.1 -0.6 ilvB operon leader peptide IvbL compare
BWI76_RS24580 -2.1 -3.5 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS20900 -2.1 -0.6 outer membrane protein assembly factor BamC compare
BWI76_RS02050 -2.1 -1.4 CidA/LrgA family protein compare
BWI76_RS20895 -2.1 -3.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00960 -2.0 -3.4 acetolactate synthase 2 catalytic subunit compare
BWI76_RS26730 -2.0 -4.2 inner membrane protein YhjD compare
BWI76_RS12400 -2.0 -4.8 TetR family transcriptional regulator compare
BWI76_RS12340 -2.0 -3.7 molecular chaperone Tir compare
BWI76_RS19840 -2.0 -0.4 hypothetical protein compare
BWI76_RS14375 -2.0 -2.2 hypothetical protein compare
BWI76_RS20155 -2.0 -1.0 NADH-quinone oxidoreductase subunit I compare
BWI76_RS23360 -2.0 -0.8 diaminopimelate decarboxylase compare
BWI76_RS06475 -2.0 -0.9 protoheme IX farnesyltransferase compare
BWI76_RS09730 -1.9 -0.5 pyruvate formate lyase 1-activating protein compare
BWI76_RS27600 -1.9 -2.6 tRNA-Sec compare
BWI76_RS18780 -1.9 -2.1 D-alanyl-D-alanine carboxypeptidase compare
BWI76_RS18715 -1.9 -6.5 hypothetical protein compare
BWI76_RS00755 -1.9 -2.4 ATP-dependent protease subunit HslV compare
BWI76_RS12470 -1.9 -1.2 thiosulfate sulfurtransferase PspE compare
BWI76_RS02530 -1.9 -0.8 tRNA dimethylallyltransferase compare
BWI76_RS09315 -1.9 -1.4 hypothetical protein compare
BWI76_RS16580 -1.9 -5.0 ubiquinol oxidase subunit II compare
BWI76_RS04100 -1.9 -2.1 peptide chain release factor 3 compare
BWI76_RS17770 -1.9 -1.1 isomerase/hydrolase compare
BWI76_RS01795 -1.9 -2.2 hypothetical protein compare
BWI76_RS06525 -1.9 -2.4 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS22645 -1.8 -4.6 RNA polymerase sigma factor RpoS compare
BWI76_RS08605 -1.8 -1.2 phosphoglyceromutase compare
BWI76_RS00345 -1.8 -2.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS09190 -1.8 -1.2 hypothetical protein compare
BWI76_RS27305 -1.8 -7.4 glycosyl transferase compare
BWI76_RS00180 -1.8 -0.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS20145 -1.8 -0.9 NADH-quinone oxidoreductase subunit K compare
BWI76_RS14300 -1.8 -1.4 hypothetical protein compare
BWI76_RS21660 -1.8 -0.9 antirestriction protein compare
BWI76_RS11895 -1.7 -1.8 AraC family transcriptional regulator compare
BWI76_RS25320 -1.7 -5.7 glutamate synthase compare
BWI76_RS08535 -1.7 -0.8 translocation protein TolB compare
BWI76_RS11980 -1.7 -1.0 DeoR family transcriptional regulator compare
BWI76_RS26290 -1.7 -3.4 glycerol-3-phosphate ABC transporter ATP-binding protein compare
BWI76_RS18000 -1.7 -3.4 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS11965 -1.7 -3.0 orotidine-5'-phosphate decarboxylase compare
BWI76_RS25315 -1.7 -6.9 glutamate synthase large subunit compare
BWI76_RS01540 -1.7 -0.8 thiamine biosynthesis protein ThiS compare
BWI76_RS02855 -1.7 -1.6 cytochrome B562 compare
BWI76_RS01220 -1.7 -3.8 DNA-dependent helicase II compare


Specific Phenotypes

For 6 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted across organisms