Experiment set14IT004 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Brachypodium distachyon 27-day exudates 3 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS11015 -6.2 -2.2 hypothetical protein compare
BWI76_RS02690 -5.8 -1.2 hypothetical protein compare
BWI76_RS20440 -5.8 -2.3 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS20140 -5.3 -3.1 NADH-quinone oxidoreductase subunit L compare
BWI76_RS24600 -5.3 -1.9 dihydroxyacetone kinase compare
BWI76_RS13240 -5.1 -1.1 hypothetical protein compare
BWI76_RS18815 -5.0 -1.8 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS04815 -5.0 -2.1 cell division protein ZapD compare
BWI76_RS08750 -5.0 -1.0 kinase inhibitor compare
BWI76_RS12285 -5.0 -1.5 hypothetical protein compare
BWI76_RS25070 -4.8 -1.0 hypothetical protein compare
BWI76_RS13590 -4.7 -1.6 hypothetical protein compare
BWI76_RS25870 -4.7 -1.0 elongation factor Tu compare
BWI76_RS01115 -4.7 -1.6 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS26455 -4.5 -1.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS21310 -4.5 -0.9 DNA repair protein RecO compare
BWI76_RS07640 -4.4 -1.5 short chain dehydrogenase compare
BWI76_RS11170 -4.3 -0.9 hypothetical protein compare
BWI76_RS04515 -4.3 -0.9 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS14375 -4.3 -2.3 hypothetical protein compare
BWI76_RS22950 -4.2 -1.2 membrane protein compare
BWI76_RS22090 -4.2 -1.5 transcriptional regulator compare
BWI76_RS23265 -4.1 -1.2 hypothetical protein compare
BWI76_RS04305 -4.1 -0.8 molecular chaperone DnaJ compare
BWI76_RS15845 -3.9 -0.8 hypothetical protein compare
BWI76_RS02815 -3.9 -1.3 fructose-bisphosphatase class I compare
BWI76_RS20150 -3.9 -1.3 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS08520 -3.8 -1.3 colicin transporter TolQ compare
BWI76_RS08605 -3.8 -1.3 phosphoglyceromutase compare
BWI76_RS22755 -3.8 -3.7 phosphoadenosine phosphosulfate reductase compare
BWI76_RS20130 -3.8 -3.0 NADH-quinone oxidoreductase subunit N compare
BWI76_RS16195 -3.7 -1.1 hypothetical protein compare
BWI76_RS04705 -3.7 -2.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS11410 -3.6 -1.5 leucine efflux protein compare
BWI76_RS04525 -3.6 -1.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS12070 -3.6 -0.7 hypothetical protein compare
BWI76_RS13755 -3.6 -1.0 hypothetical protein compare
BWI76_RS17190 -3.5 -1.2 TonB system transport protein TonB compare
BWI76_RS11900 -3.5 -0.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS04160 -3.5 -1.9 phosphoserine phosphatase compare
BWI76_RS12460 -3.5 -1.0 envelope stress response membrane protein PspC compare
BWI76_RS20155 -3.5 -1.2 NADH-quinone oxidoreductase subunit I compare
BWI76_RS05015 -3.4 -1.4 transcriptional regulator compare
BWI76_RS21070 -3.4 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS08530 -3.3 -1.0 protein TolA compare
BWI76_RS25600 -3.3 -0.7 tRNA-Thr compare
BWI76_RS25335 -3.3 -1.1 stringent starvation protein A compare
BWI76_RS25920 -3.3 -1.1 peptidylprolyl isomerase compare
BWI76_RS19770 -3.2 -0.9 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS21115 -3.2 -1.8 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS15795 -3.2 -1.8 bacteriophage CII family protein compare
BWI76_RS10745 -3.2 -0.6 hypothetical protein compare
BWI76_RS11150 -3.2 -0.9 membrane protein compare
BWI76_RS21345 -3.2 -1.5 sigma-E factor regulatory protein RseB compare
BWI76_RS20360 -3.2 -0.6 cell division protein DedD compare
BWI76_RS14305 -3.0 -3.5 metallophosphoesterase compare
BWI76_RS00965 -3.0 -0.6 acetolactate synthase 2 small subunit compare
BWI76_RS05835 -3.0 -1.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS20230 -3.0 -0.9 hypothetical protein compare
BWI76_RS04645 -2.9 -1.9 3-dehydroquinase compare
BWI76_RS16235 -2.9 -2.2 membrane protein compare
BWI76_RS19040 -2.9 -4.5 hypothetical protein compare
BWI76_RS21350 -2.9 -2.3 anti-RNA polymerase sigma factor SigE compare
BWI76_RS23920 -2.9 -1.3 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS07465 -2.8 -0.8 TetR family transcriptional regulator compare
BWI76_RS15635 -2.8 -4.0 hypothetical protein compare
BWI76_RS16315 -2.8 -0.8 SirA-like protein compare
BWI76_RS13195 -2.8 -2.2 glutamate dehydrogenase compare
BWI76_RS16485 -2.7 -0.8 ribonuclease T compare
BWI76_RS19905 -2.7 -2.8 OmpK36 porin compare
BWI76_RS14820 -2.6 -1.4 LysR family transcriptional regulator compare
BWI76_RS01800 -2.6 -1.4 glucose-6-phosphate isomerase compare
BWI76_RS13470 -2.6 -1.3 transporter compare
BWI76_RS06535 -2.6 -1.5 endopeptidase La compare
BWI76_RS26620 -2.6 -0.5 Fe-S biogenesis protein NfuA compare
BWI76_RS19010 -2.6 -1.4 polysaccharide pyruvyl transferase yvff compare
BWI76_RS08210 -2.6 -0.7 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS15825 -2.5 -0.7 hypothetical protein compare
BWI76_RS07595 -2.5 -1.4 putative oxidoreductase compare
BWI76_RS24180 -2.5 -1.4 hypothetical protein compare
BWI76_RS20380 -2.5 -0.5 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS09645 -2.5 -0.5 thioredoxin-disulfide reductase compare
BWI76_RS07730 -2.5 -0.5 iron-enterobactin transporter membrane protein compare
BWI76_RS24605 -2.4 -4.3 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS12145 -2.4 -1.6 hypothetical protein compare
BWI76_RS21580 -2.4 -0.8 SsrA-binding protein compare
BWI76_RS04060 -2.4 -1.7 hypothetical protein compare
BWI76_RS20170 -2.4 -3.2 NADH-quinone oxidoreductase subunit F compare
BWI76_RS09640 -2.4 -1.2 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS11335 -2.4 -1.1 tautomerase compare
BWI76_RS08535 -2.4 -0.8 translocation protein TolB compare
BWI76_RS23365 -2.4 -2.5 LysR family transcriptional regulator compare
BWI76_RS22765 -2.3 -5.8 sulfite reductase subunit alpha compare
BWI76_RS21370 -2.3 -0.7 ATP-dependent RNA helicase SrmB compare
BWI76_RS22420 -2.3 -1.4 LacI family transcriptional regulator compare
BWI76_RS09195 -2.3 -0.7 N-acetyltransferase compare
BWI76_RS09755 -2.3 -2.2 phosphoserine transaminase compare
BWI76_RS20050 -2.3 -1.3 hypothetical protein compare
BWI76_RS00875 -2.2 -2.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS08455 -2.2 -2.7 glutaminase compare
BWI76_RS24610 -2.2 -2.6 dihydroxyacetone kinase compare
BWI76_RS05515 -2.2 -2.5 NADH:ubiquinone reductase (Na(+)-transporting) subunit F compare
BWI76_RS11255 -2.2 -1.0 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS18000 -2.2 -2.9 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS19240 -2.2 -1.2 ABC transporter substrate-binding protein compare
BWI76_RS09970 -2.2 -0.6 porin OmpA compare
BWI76_RS00240 -2.2 -0.9 FMN-binding protein MioC compare
BWI76_RS11435 -2.2 -1.0 hypothetical protein compare
BWI76_RS25700 -2.1 -3.0 heavy metal-responsive transcriptional regulator compare
BWI76_RS17300 -2.1 -0.6 tRNA-Tyr compare
BWI76_RS20135 -2.1 -1.7 NADH-quinone oxidoreductase subunit M compare
BWI76_RS27820 -2.1 -0.6 ilvB operon leader peptide IvbL compare
BWI76_RS25425 -2.1 -0.6 arginine repressor compare
BWI76_RS13820 -2.1 -0.9 hypothetical protein compare
BWI76_RS20900 -2.1 -0.6 outer membrane protein assembly factor BamC compare
BWI76_RS18695 -2.1 -3.6 GntR family transcriptional regulator compare
BWI76_RS10575 -2.1 -0.6 polar amino acid ABC transporter permease compare
BWI76_RS25960 -2.1 -2.1 NUDIX hydrolase compare
BWI76_RS27600 -2.0 -1.4 tRNA-Sec compare
BWI76_RS01190 -2.0 -0.9 iron donor protein CyaY compare
BWI76_RS09860 -2.0 -1.4 hypothetical protein compare
BWI76_RS16425 -2.0 -1.3 hypothetical protein compare
BWI76_RS19325 -2.0 -1.8 mandelate racemase compare
BWI76_RS09450 -2.0 -1.4 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS07645 -1.9 -1.1 short-chain dehydrogenase/reductase compare
BWI76_RS19850 -1.9 -1.4 tRNA-Pro compare
BWI76_RS02610 -1.9 -2.6 transcriptional regulator compare
BWI76_RS00180 -1.9 -0.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS08330 -1.9 -0.8 hypothetical protein compare
BWI76_RS04250 -1.9 -3.5 homoserine kinase compare
BWI76_RS22625 -1.9 -0.7 transcriptional regulator compare
BWI76_RS19730 -1.9 -2.1 1-phosphofructokinase compare
BWI76_RS19840 -1.9 -0.4 hypothetical protein compare
BWI76_RS09730 -1.8 -0.5 pyruvate formate lyase 1-activating protein compare
BWI76_RS01540 -1.8 -1.7 thiamine biosynthesis protein ThiS compare
BWI76_RS14415 -1.8 -1.3 transcriptional regulator, TetR family protein compare
BWI76_RS01885 -1.8 -1.0 CsbD family protein compare
BWI76_RS01125 -1.8 -3.7 4-alpha-L-fucosyltransferase compare
BWI76_RS07070 -1.8 -2.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS05655 -1.8 -1.0 hypothetical protein compare
BWI76_RS11110 -1.8 -1.2 cell division protein YceG compare
BWI76_RS26505 -1.8 -1.9 nickel ABC transporter permease subunit NikB compare
BWI76_RS23360 -1.8 -0.7 diaminopimelate decarboxylase compare
BWI76_RS12270 -1.8 -1.4 hypothetical protein compare
BWI76_RS24580 -1.8 -2.1 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS02530 -1.8 -0.8 tRNA dimethylallyltransferase compare
BWI76_RS21375 -1.8 -0.5 autonomous glycyl radical cofactor GrcA compare
BWI76_RS06485 -1.8 -1.3 cytochrome o ubiquinol oxidase subunit III compare
BWI76_RS24740 -1.7 -1.8 GntR family transcriptional regulator compare
BWI76_RS10640 -1.7 -1.2 AraC family transcriptional regulator compare
BWI76_RS27165 -1.7 -3.1 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS12205 -1.7 -1.7 hypothetical protein compare
BWI76_RS16910 -1.7 -1.7 2-keto-4-pentenoate hydratase compare
BWI76_RS21075 -1.7 -1.0 membrane protein compare
BWI76_RS00065 -1.7 -2.5 MurR/RpiR family transcriptional regulator compare
BWI76_RS24290 -1.7 -1.8 membrane protein compare
BWI76_RS16150 -1.7 -1.5 IclR family transcriptional regulator compare
BWI76_RS09760 -1.7 -1.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS18110 -1.7 -2.9 transcriptional regulator HexR compare
BWI76_RS18930 -1.7 -2.3 histidinol-phosphate transaminase compare
BWI76_RS24885 -1.6 -0.5 PTS galactitol transporter subunit IIB compare
BWI76_RS08780 -1.6 -1.6 ABC transporter compare
BWI76_RS14770 -1.6 -0.6 PTS IIA 2 domain protein compare
BWI76_RS27170 -1.6 -3.2 MltR family transcriptional regulator compare
BWI76_RS15270 -1.6 -2.3 phenazine biosynthesis protein PhzF family compare
BWI76_RS16480 -1.6 -0.9 lactoylglutathione lyase compare
BWI76_RS01330 -1.6 -2.8 twin-arginine translocase subunit TatC compare
BWI76_RS26095 -1.6 -0.4 shikimate kinase compare
BWI76_RS18940 -1.6 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS09190 -1.6 -1.1 hypothetical protein compare
BWI76_RS16965 -1.6 -1.4 murein lipoprotein compare
BWI76_RS06290 -1.6 -1.0 ACP phosphodiesterase compare
BWI76_RS18915 -1.6 -1.6 NAD(P)-dependent oxidoreductase compare
BWI76_RS24400 -1.6 -1.1 outer membrane channel protein TolC compare
BWI76_RS16900 -1.6 -0.9 4-hydroxy-2-oxovalerate aldolase compare
BWI76_RS21565 -1.6 -0.5 outer membrane protein assembly factor BamE compare
BWI76_RS09420 -1.6 -0.9 hypothetical protein compare
BWI76_RS16605 -1.5 -2.6 hypothetical protein compare
BWI76_RS09825 -1.5 -3.5 envelope biogenesis factor ElyC compare
BWI76_RS07435 -1.5 -3.0 LacI family transcriptional regulator compare
BWI76_RS20160 -1.5 -1.5 NADH-quinone oxidoreductase subunit H compare
BWI76_RS12275 -1.5 -3.4 hypothetical protein compare
BWI76_RS12640 -1.5 -3.4 hypothetical protein compare
BWI76_RS21675 -1.5 -0.4 hypothetical protein compare
BWI76_RS26890 -1.5 -0.9 hypothetical protein compare
BWI76_RS01170 -1.5 -2.0 uroporphyrinogen-III C-methyltransferase compare
BWI76_RS26670 -1.5 -3.7 two-component sensor histidine kinase compare
BWI76_RS26330 -1.5 -2.8 ABC transporter ATP-binding protein compare
BWI76_RS09255 -1.5 -1.6 hypothetical protein compare
BWI76_RS25065 -1.5 -1.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS11700 -1.5 -0.8 hypothetical protein compare
BWI76_RS10430 -1.5 -2.0 thiol:disulfide interchange protein DsbG compare
BWI76_RS12395 -1.4 -4.5 zinc-binding alcohol dehydrogenase compare
BWI76_RS21450 -1.4 -0.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS13770 -1.4 -1.4 alkylhydroperoxidase domain protein compare
BWI76_RS11980 -1.4 -0.9 DeoR family transcriptional regulator compare
BWI76_RS15360 -1.4 -1.4 hypothetical protein compare
BWI76_RS05180 -1.4 -3.2 serine endoprotease DegQ compare
BWI76_RS15605 -1.4 -1.3 hypothetical protein compare
BWI76_RS01095 -1.4 -1.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare


Specific Phenotypes

For 4 genes in this experiment

For exudates Brachypodium distachyon 27-day exudates in Klebsiella michiganensis M5al

For exudates Brachypodium distachyon 27-day exudates across organisms