Experiment set14IT003 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Betaine (C)(N); with TAPS; with Sodium chloride

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS14715 +4.6 27.0 protein-glutamate O-methyltransferase CheR compare
PFLU_RS00435 +2.5 19.0 PAS domain-containing protein compare
PFLU_RS13715 +2.4 2.8 MmcQ/YjbR family DNA-binding protein compare
PFLU_RS25865 +2.1 4.6 YhbY family RNA-binding protein compare
PFLU_RS31440 +2.1 3.1 hypothetical protein compare
PFLU_RS00460 +2.1 14.2 glutamate/aspartate:proton symporter GltP compare
PFLU_RS29810 +1.8 11.9 LysR family transcriptional regulator compare
PFLU_RS29360 +1.7 3.0 cytochrome c5 family protein compare
PFLU_RS22600 +1.7 3.5 RNA polymerase sigma factor SigX compare
PFLU_RS30030 +1.6 1.7 membrane protein compare
PFLU_RS26290 +1.5 1.4 2Fe-2S iron-sulfur cluster binding domain-containing protein compare
PFLU_RS09190 +1.5 2.7 hypothetical protein compare
PFLU_RS25125 +1.4 8.1 biliverdin-producing heme oxygenase compare
PFLU_RS29400 +1.4 2.2 DUF1127 domain-containing protein compare
PFLU_RS01500 +1.2 1.6 cell division protein FtsQ compare
PFLU_RS08735 +1.2 1.4 histidine phosphatase family protein compare
PFLU_RS03960 +1.2 2.2 tRNA-Thr compare
PFLU_RS12830 +1.2 7.5 PAS domain-containing protein compare
PFLU_RS31490 +1.2 1.2 hypothetical protein compare
PFLU_RS14680 +1.2 2.8 cbb3-type cytochrome c oxidase subunit 3 compare
PFLU_RS23590 +1.2 2.1 gluconokinase compare
PFLU_RS27440 +1.2 4.8 nucleotidyltransferase family protein compare
PFLU_RS13370 +1.1 1.2 DUF2790 domain-containing protein compare
PFLU_RS28305 +1.1 3.8 purine-binding chemotaxis protein CheW compare
PFLU_RS00190 +1.1 2.1 DUF883 domain-containing protein compare
PFLU_RS12225 +1.1 5.3 methyl-accepting chemotaxis protein compare
PFLU_RS12615 +1.1 3.8 oxidoreductase compare
PFLU_RS26955 +1.1 6.8 sugar nucleotide-binding protein compare
PFLU_RS24305 +1.1 1.3 antibiotic biosynthesis monooxygenase compare
PFLU_RS11645 +1.1 3.0 SMP-30/gluconolactonase/LRE family protein compare
PFLU_RS08065 +1.1 5.2 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS22390 +1.1 2.1 hypothetical protein compare
PFLU_RS29560 +1.1 0.8 hypothetical protein compare
PFLU_RS19215 +1.1 2.8 hypothetical protein compare
PFLU_RS14335 +1.1 1.7 ABC transporter permease compare
PFLU_RS09675 +1.1 4.5 hypothetical protein compare
PFLU_RS17615 +1.1 1.5 DeoR/GlpR transcriptional regulator compare
PFLU_RS18885 +1.0 1.4 peptidyl-prolyl cis-trans isomerase compare
PFLU_RS01910 +1.0 0.9 sterol-binding protein compare
PFLU_RS25955 +1.0 1.2 hypothetical protein compare
PFLU_RS01470 +1.0 4.7 cellulose synthase operon protein YhjQ compare
PFLU_RS19610 +1.0 2.7 hypothetical protein compare
PFLU_RS23325 +1.0 5.6 GlxA family transcriptional regulator compare
PFLU_RS28780 +1.0 6.9 aspartate aminotransferase family protein compare
PFLU_RS01480 +1.0 7.5 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB compare
PFLU_RS18370 +1.0 4.2 low molecular weight phosphotyrosine protein phosphatase compare
PFLU_RS14125 +1.0 1.9 lysozyme compare
PFLU_RS19870 +1.0 3.1 ABC transporter substrate-binding protein compare
PFLU_RS11670 +1.0 1.8 SDR family oxidoreductase compare
PFLU_RS03585 +1.0 1.6 hypothetical protein compare
PFLU_RS31510 +1.0 1.4 transcriptional regulator compare
PFLU_RS06320 +1.0 2.2 OmpH family outer membrane protein compare
PFLU_RS15420 +0.9 1.9 hypothetical protein compare
PFLU_RS31630 +0.9 1.5 hypothetical protein compare
PFLU_RS30350 +0.9 3.0 hypothetical protein compare
PFLU_RS20015 +0.9 1.6 transporter compare
PFLU_RS15275 +0.9 1.5 hypothetical protein compare
PFLU_RS06855 +0.9 1.2 helix-turn-helix transcriptional regulator compare
PFLU_RS24980 +0.9 1.3 purine-binding chemotaxis protein CheW compare
PFLU_RS23285 +0.9 4.4 succinylglutamate desuccinylase compare
PFLU_RS28310 +0.9 1.1 response regulator compare
PFLU_RS11600 +0.9 2.5 metallophosphoesterase family protein compare
PFLU_RS01005 +0.9 1.1 ABC transporter ATP-binding protein compare
PFLU_RS20705 +0.9 2.7 hypothetical protein compare
PFLU_RS20330 +0.9 1.9 cold-shock protein compare
PFLU_RS18435 +0.9 2.0 arsenate reductase (glutaredoxin) compare
PFLU_RS22415 +0.9 2.9 recombination protein RecR compare
PFLU_RS08600 +0.9 2.4 glutaredoxin family protein compare
PFLU_RS20715 +0.9 1.6 iron ABC transporter permease compare
PFLU_RS19325 +0.9 3.3 DASS family sodium-coupled anion symporter compare
PFLU_RS21240 +0.9 1.2 hypothetical protein compare
PFLU_RS15450 +0.9 3.1 flavin reductase family protein compare
PFLU_RS06890 +0.9 3.5 YceI family protein compare
PFLU_RS14690 +0.9 2.2 hypothetical protein compare
PFLU_RS11880 +0.9 2.2 general secretion pathway protein GspL compare
PFLU_RS18135 +0.8 2.2 ABC transporter substrate-binding protein compare
PFLU_RS01835 +0.8 5.4 glucan biosynthesis protein G compare
PFLU_RS25575 +0.8 3.9 diguanylate cyclase compare
PFLU_RS21635 +0.8 3.1 flagellar motor protein compare
PFLU_RS29555 +0.8 5.0 HDOD domain-containing protein compare
PFLU_RS07540 +0.8 1.6 class II glutamine amidotransferase compare
PFLU_RS15365 +0.8 3.6 cupin domain-containing protein compare
PFLU_RS21705 +0.8 3.9 flagellar biosynthesis protein FliQ compare
PFLU_RS19420 +0.8 2.8 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS06530 +0.8 1.4 collagen-like triple helix repeat-containing protein compare
PFLU_RS14060 +0.8 2.9 phage tail protein compare
PFLU_RS26075 +0.8 2.4 IS66 family insertion sequence hypothetical protein compare
PFLU_RS09200 +0.8 5.7 transglutaminase family protein compare
PFLU_RS18715 +0.8 2.8 MFS transporter compare
PFLU_RS02215 +0.8 1.3 hypothetical protein compare
PFLU_RS20335 +0.8 1.5 hypothetical protein compare
PFLU_RS25920 +0.8 1.1 outer membrane protein assembly factor BamE compare
PFLU_RS15040 +0.8 2.3 glyoxalase compare
PFLU_RS31495 +0.8 2.3 hypothetical protein compare
PFLU_RS14220 +0.8 3.4 iron uptake system protein EfeO compare
PFLU_RS14255 +0.8 2.5 TolC family protein compare
PFLU_RS01490 +0.8 6.2 cellulose biosynthesis protein BcsC compare
PFLU_RS04660 +0.8 2.7 division/cell wall cluster transcriptional repressor MraZ compare
PFLU_RS21360 +0.8 0.7 MarR family transcriptional regulator compare
PFLU_RS29215 +0.8 4.4 response regulator transcription factor compare
PFLU_RS27445 +0.8 5.6 phosphotransferase compare
PFLU_RS28675 +0.8 4.7 SdiA-regulated domain-containing protein compare
PFLU_RS11490 +0.8 1.3 ABC transporter ATP-binding protein compare
PFLU_RS21910 +0.8 6.0 BamA/TamA family outer membrane protein compare
PFLU_RS05785 +0.8 2.8 hypothetical protein compare
PFLU_RS09255 +0.8 3.1 recombination-associated protein RdgC compare
PFLU_RS23180 +0.8 3.9 flagellar basal body rod protein FlgB compare
PFLU_RS20405 +0.8 2.5 carbon storage regulator CsrA compare
PFLU_RS14135 +0.8 3.1 hypothetical protein compare
PFLU_RS11870 +0.8 1.6 type II secretion system protein GspG compare
PFLU_RS14130 +0.8 2.0 hypothetical protein compare
PFLU_RS08760 +0.8 1.7 phosphonate C-P lyase system protein PhnG compare
PFLU_RS18350 +0.8 0.9 GIY-YIG nuclease family protein compare
PFLU_RS03060 +0.8 6.3 PleD family two-component system response regulator compare
PFLU_RS06800 +0.8 3.6 AdeC/AdeK/OprM family multidrug efflux complex outer membrane factor compare
PFLU_RS14710 +0.8 3.8 response regulator compare
PFLU_RS12210 +0.8 2.2 hypothetical protein compare
PFLU_RS14655 +0.7 3.2 MFS transporter compare
PFLU_RS07000 +0.7 2.6 DMT family transporter compare
PFLU_RS12365 +0.7 2.7 IclR family transcriptional regulator compare
PFLU_RS11830 +0.7 1.1 hypothetical protein compare
PFLU_RS13585 +0.7 2.5 DNA-binding protein compare
PFLU_RS06810 +0.7 3.4 efflux RND transporter periplasmic adaptor subunit compare
PFLU_RS14510 +0.7 2.7 DNA oxidative demethylase AlkB compare
PFLU_RS17025 +0.7 3.2 HAAAP family serine/threonine permease compare
PFLU_RS13765 +0.7 1.2 hypothetical protein compare
PFLU_RS11720 +0.7 1.7 hypothetical protein compare
PFLU_RS17295 +0.7 2.3 type VI secretion system contractile sheath small subunit compare
PFLU_RS18250 +0.7 1.9 DUF2160 domain-containing protein compare
PFLU_RS03055 +0.7 1.5 methyl-accepting chemotaxis protein compare
PFLU_RS17270 +0.7 3.1 serine/threonine protein kinase compare
PFLU_RS11340 +0.7 1.8 RraA family protein compare
PFLU_RS01475 +0.7 4.8 UDP-forming cellulose synthase catalytic subunit compare
PFLU_RS28265 +0.7 1.7 malonate decarboxylase subunit delta compare
PFLU_RS01840 +0.7 5.5 glucans biosynthesis glucosyltransferase MdoH compare
PFLU_RS03250 +0.7 0.9 heavy-metal-associated domain-containing protein compare
PFLU_RS13530 +0.7 2.9 hypothetical protein compare
PFLU_RS02745 +0.7 2.9 ABC transporter ATP-binding protein compare
PFLU_RS20875 +0.7 2.3 hypothetical protein compare
PFLU_RS24865 +0.7 2.5 serine O-acetyltransferase compare
PFLU_RS12455 +0.7 2.8 N(5)-hydroxyornithine transformylase PvdF compare
PFLU_RS14915 +0.7 3.9 WYL domain-containing protein compare
PFLU_RS21740 +0.7 3.1 Hpt domain-containing protein compare
PFLU_RS24695 +0.7 0.9 PTS glucose transporter subunit IIB compare
PFLU_RS27790 +0.7 2.2 hypothetical protein compare
PFLU_RS04570 +0.7 1.6 class I SAM-dependent methyltransferase compare
PFLU_RS17145 +0.7 2.2 glutathione S-transferase compare
PFLU_RS01130 +0.7 2.6 amino acid ABC transporter ATP-binding protein compare
PFLU_RS09680 +0.7 2.9 TIGR03759 family integrating conjugative element protein compare
PFLU_RS03245 +0.7 3.4 hypothetical protein compare
PFLU_RS15515 +0.7 1.7 hypothetical protein compare
PFLU_RS14225 +0.7 2.9 deferrochelatase/peroxidase EfeB compare
PFLU_RS17610 +0.7 2.8 alpha-hydroxy-acid oxidizing protein compare
PFLU_RS19875 +0.7 1.9 amino acid ABC transporter ATP-binding protein compare
PFLU_RS07960 +0.7 1.7 hypothetical protein compare
PFLU_RS15575 +0.7 1.8 fumarylacetoacetate hydrolase family protein compare
PFLU_RS03030 +0.7 3.8 DUF3426 domain-containing protein compare
PFLU_RS05050 +0.7 1.3 response regulator transcription factor compare
PFLU_RS28315 +0.7 0.4 response regulator compare
PFLU_RS25870 +0.7 3.8 hypothetical protein compare
PFLU_RS07195 +0.7 1.5 hypothetical protein compare
PFLU_RS00040 +0.7 5.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PFLU_RS26890 +0.7 3.1 bifunctional 3,4-dihydroxy-2-butanone-4-phosphate synthase/GTP cyclohydrolase II compare
PFLU_RS21015 +0.7 2.0 alpha/beta fold hydrolase compare
PFLU_RS13880 +0.7 3.2 hypothetical protein compare
PFLU_RS04530 +0.7 1.1 hypothetical protein compare
PFLU_RS16710 +0.7 1.4 nitrite reductase small subunit NirD compare
PFLU_RS28300 +0.7 2.6 chemotaxis protein compare
PFLU_RS03540 +0.7 1.9 type III secretion protein compare
PFLU_RS10025 +0.7 2.2 metal ABC transporter substrate-binding protein compare
PFLU_RS17955 +0.7 2.3 hypothetical protein compare
PFLU_RS25155 +0.7 2.9 sensor domain-containing diguanylate cyclase compare
PFLU_RS27775 +0.7 2.6 ATP-dependent zinc protease compare
PFLU_RS18585 +0.7 0.9 high frequency lysogenization protein HflD compare
PFLU_RS30770 +0.7 1.0 thioredoxin family protein compare
PFLU_RS29295 +0.7 1.9 YjbQ family protein compare
PFLU_RS14120 +0.6 2.3 cell wall hydrolase compare
PFLU_RS10965 +0.6 1.8 transporter substrate-binding domain-containing protein compare
PFLU_RS05475 +0.6 3.5 amino acid permease compare
PFLU_RS14250 +0.6 1.6 MFS transporter compare
PFLU_RS11990 +0.6 1.3 hypothetical protein compare
PFLU_RS17940 +0.6 2.1 low molecular weight phosphotyrosine protein phosphatase compare
PFLU_RS18810 +0.6 2.3 AMP-binding protein compare
PFLU_RS12120 +0.6 3.1 transcriptional regulator compare
PFLU_RS08980 +0.6 4.6 branched-chain amino acid transport system II carrier protein compare
PFLU_RS10310 +0.6 2.8 SDR family oxidoreductase compare
PFLU_RS05130 +0.6 3.4 HAAAP family serine/threonine permease compare
PFLU_RS28450 +0.6 1.8 cell division ATP-binding protein FtsE compare
PFLU_RS01395 +0.6 2.5 thioesterase compare
PFLU_RS30435 +0.6 2.7 DNA-binding protein compare
PFLU_RS21520 +0.6 2.2 thioesterase compare
PFLU_RS08295 +0.6 2.1 methyl-accepting chemotaxis protein compare
PFLU_RS01755 +0.6 4.1 lipocalin family protein compare
PFLU_RS21690 +0.6 1.3 DNA-binding protein compare
PFLU_RS11555 +0.6 1.4 four-carbon acid sugar kinase family protein compare
PFLU_RS19010 +0.6 1.5 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS17895 +0.6 2.1 glycosyltransferase family 2 protein compare
PFLU_RS13180 +0.6 1.5 hypothetical protein compare
PFLU_RS07160 +0.6 4.3 response regulator compare
PFLU_RS20410 +0.6 2.4 hypothetical protein compare


Specific Phenotypes

For 22 genes in this experiment

For stress Betaine in Pseudomonas fluorescens SBW25-INTG

For stress Betaine across organisms