Experiment set14H46 for Pseudomonas stutzeri RCH2

Compare to:

Anaerobic 50 uM Lead (II) nitrate sample3

200 most detrimental genes:

  gene name fitness t score description  
Psest_2757 +1.0 2.5 hypothetical protein compare
Psest_2855 +1.0 2.7 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_3910 +0.9 2.3 Uncharacterized protein conserved in bacteria compare
Psest_4142 +0.8 1.5 hypothetical protein compare
Psest_2748 +0.8 2.2 Transcriptional regulator compare
Psest_1782 +0.8 1.8 Predicted transcriptional regulators compare
Psest_2786 +0.7 1.5 Domain of unknown function (DUF3597). compare
Psest_1877 +0.7 3.1 AraC-type DNA-binding domain-containing proteins compare
Psest_0511 +0.7 1.8 rRNA large subunit m3Psi methyltransferase RlmH compare
Psest_4274 +0.7 2.4 hypothetical protein compare
Psest_3400 +0.7 1.7 Copper resistance protein D. compare
Psest_2975 +0.7 2.3 tRNA_Arg_CCT compare
Psest_3531 +0.6 1.0 Peptidase propeptide and YPEB domain. compare
Psest_3693 +0.6 1.2 Glycosyltransferases involved in cell wall biogenesis compare
Psest_4310 +0.6 1.1 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_1149 +0.6 2.1 Protein affecting phage T7 exclusion by the F plasmid compare
Psest_1049 +0.6 2.5 Uncharacterized paraquat-inducible protein A compare
Psest_3519 +0.6 2.3 Uncharacterized conserved protein compare
Psest_2091 +0.6 3.1 Molecular chaperone (small heat shock protein) compare
Psest_0401 +0.6 1.2 isopentenyl-diphosphate delta-isomerase, type 2 compare
Psest_0417 +0.6 1.3 Acyl-CoA dehydrogenases compare
Psest_0805 +0.5 2.6 hypothetical protein compare
Psest_3803 +0.5 1.1 DNA repair protein radc compare
Psest_3045 +0.5 1.5 Cold shock proteins compare
Psest_1516 +0.5 1.5 Uncharacterized lipoprotein compare
Psest_3828 +0.5 1.0 zinc-binding alcohol dehydrogenase family protein compare
Psest_3031 +0.5 0.9 hypothetical protein compare
Psest_1016 +0.5 3.0 putative TIM-barrel protein, nifR3 family compare
Psest_0119 +0.5 1.5 hypothetical protein compare
Psest_1994 +0.5 2.1 Amidases related to nicotinamidase compare
Psest_1986 +0.5 1.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
Psest_0970 +0.5 1.9 hypothetical protein compare
Psest_2847 +0.5 1.7 Multisubunit Na+/H+ antiporter, MnhF subunit compare
Psest_3395 +0.4 0.7 hypothetical protein compare
Psest_1872 +0.4 1.9 selT/selW/selH selenoprotein domain compare
Psest_3853 +0.4 1.6 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_1349 +0.4 1.4 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_3373 +0.4 2.0 Tfp pilus assembly protein PilX compare
Psest_4168 +0.4 2.4 Flagellar FliJ protein. compare
Psest_1762 +0.4 1.3 cytochrome c-type biogenesis protein CcmI compare
Psest_2165 +0.4 2.1 Cytochrome B561 compare
Psest_3670 +0.4 3.5 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_0652 +0.4 1.7 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components compare
Psest_2892 +0.4 1.8 Transcriptional regulator compare
Psest_1457 +0.4 0.9 FOG: Ankyrin repeat compare
Psest_1395 +0.4 2.1 Short-chain alcohol dehydrogenase of unknown specificity compare
Psest_2899 +0.4 1.1 hypothetical protein compare
Psest_1665 +0.4 1.8 hypothetical protein compare
Psest_4370 +0.4 1.1 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_2912 +0.4 1.9 Uncharacterized conserved protein compare
Psest_2150 +0.4 1.3 DNA polymerase LigD, polymerase domain compare
Psest_1574 +0.4 1.6 phenazine biosynthesis protein PhzF family compare
Psest_0857 +0.4 1.1 Membrane transporters of cations and cationic drugs compare
Psest_0134 +0.4 2.0 type VI secretion-associated protein, VC_A0119 family compare
Psest_0692 +0.4 1.4 rRNA methylase, putative, group 3 compare
Psest_1117 +0.4 1.8 Lipid A 3-O-deacylase (PagL). compare
Psest_1421 +0.4 1.6 Glutathione S-transferase compare
Psest_0716 +0.4 1.3 Protein of unknown function (DUF3094). compare
Psest_1567 +0.4 1.9 Transcriptional regulator compare
Psest_1652 +0.4 2.3 Protein of unknown function (DUF2803). compare
Psest_1408 +0.4 2.1 Predicted unusual protein kinase compare
Psest_1227 +0.4 1.7 Predicted SAM-dependent methyltransferase compare
Psest_3047 +0.4 0.9 methionyl-tRNA synthetase/methionyl-tRNA synthetase C-terminal region/beta chain compare
Psest_2266 +0.4 1.4 hypothetical protein compare
Psest_2253 +0.4 1.3 small redox-active disulfide protein 2 compare
Psest_0782 +0.4 1.8 Transcriptional regulator of aromatic amino acids metabolism compare
Psest_3694 +0.4 2.0 Predicted acyltransferase compare
Psest_0078 +0.4 0.9 hypothetical protein compare
Psest_2486 +0.4 1.8 Uncharacterized protein, possibly involved in aromatic compounds catabolism compare
Psest_1118 +0.4 1.6 Predicted Fe-S-cluster oxidoreductase compare
Psest_1206 +0.4 1.7 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_4265 +0.4 2.7 dTDP-4-dehydrorhamnose reductase compare
Psest_0702 +0.4 1.5 Methyl-accepting chemotaxis protein compare
Psest_1371 +0.4 1.2 hypothetical protein compare
Psest_1881 +0.4 2.1 Nitroreductase compare
Psest_1090 +0.4 2.0 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_1366 +0.4 1.0 hypothetical protein compare
Psest_3533 +0.4 1.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0756 +0.4 2.0 alkylhydroperoxidase AhpD family core domain compare
Psest_2764 +0.4 0.7 hypothetical protein compare
Psest_3189 +0.4 1.6 hypothetical protein compare
Psest_1876 +0.4 1.6 Predicted membrane protein compare
Psest_2667 +0.4 1.7 Uncharacterized protein involved in propionate catabolism compare
Psest_3962 +0.4 0.8 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED compare
Psest_2293 +0.4 0.9 hypothetical protein compare
Psest_4219 +0.3 0.8 DNA polymerase I compare
Psest_2425 +0.3 1.9 Trk-type K+ transport systems, membrane components compare
Psest_4273 +0.3 1.3 Lysophospholipase compare
Psest_1388 +0.3 0.8 Uncharacterized protein conserved in bacteria compare
Psest_3343 +0.3 1.6 Predicted periplasmic protein compare
Psest_2768 +0.3 1.0 Kef-type K+ transport systems, predicted NAD-binding component compare
Psest_2088 +0.3 0.9 Uncharacterized protein conserved in bacteria compare
Psest_1650 +0.3 2.0 hypothetical protein compare
Psest_0505 +0.3 1.5 Putative effector of murein hydrolase compare
Psest_4395 +0.3 2.0 hypothetical protein compare
Psest_2096 +0.3 1.5 Domain of unknown function (DUF1883). compare
Psest_3185 +0.3 1.0 MoxR-like ATPases compare
Psest_1524 +0.3 1.5 Sel1 repeat. compare
Psest_3014 +0.3 0.8 cob(I)alamin adenosyltransferase compare
Psest_3557 +0.3 2.1 Predicted redox protein, regulator of disulfide bond formation compare
Psest_4158 +0.3 1.0 Flagellar motor protein compare
Psest_3365 +0.3 1.9 Predicted membrane protein compare
Psest_1634 +0.3 2.4 tRNA U-34 5-methylaminomethyl-2-thiouridine biosynthesis protein MnmC, C-terminal domain compare
Psest_3854 +0.3 1.7 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_1546 +0.3 1.8 NADH:flavin oxidoreductases, Old Yellow Enzyme family compare
Psest_0299 +0.3 1.7 Chemotaxis signal transduction protein compare
Psest_1804 +0.3 0.4 Superfamily II DNA and RNA helicases compare
Psest_4109 +0.3 2.2 selenocysteine-specific elongation factor SelB compare
Psest_2736 +0.3 2.0 Transposase and inactivated derivatives compare
Psest_3005 +0.3 1.0 Fructose-2,6-bisphosphatase compare
Psest_0587 +0.3 1.4 Domain of Unknown Function (DUF326). compare
Psest_3191 +0.3 1.3 2-polyprenylphenol hydroxylase and related flavodoxin oxidoreductases compare
Psest_2343 +0.3 1.2 Mg-dependent DNase compare
Psest_2454 +0.3 0.9 Rhodanese-related sulfurtransferase compare
Psest_3447 +0.3 0.7 Uncharacterized MobA-related protein compare
Psest_2796 +0.3 1.4 HNH endonuclease. compare
Psest_1763 +0.3 1.4 hypothetical protein compare
Psest_2225 +0.3 1.7 Diacylglycerol kinase compare
Psest_1354 +0.3 1.0 Uncharacterized protein conserved in bacteria compare
Psest_1305 +0.3 1.3 Heat shock protein compare
Psest_3824 +0.3 1.3 Predicted membrane protein compare
Psest_3943 +0.3 1.3 Phosphoribosyl-AMP cyclohydrolase compare
Psest_2000 +0.3 1.5 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_2681 +0.3 1.6 Uncharacterized protein conserved in bacteria compare
Psest_1919 +0.3 1.2 Uncharacterized membrane protein (homolog of Drosophila rhomboid) compare
Psest_3188 +0.3 1.3 hypothetical protein compare
Psest_2629 +0.3 1.6 Flp pilus assembly protein, pilin Flp compare
Psest_3155 +0.3 1.3 hypothetical protein compare
Psest_4088 +0.3 1.5 Transcriptional regulators compare
Psest_1062 +0.3 1.6 Carbonic anhydrase compare
Psest_2153 +0.3 1.7 formate dehydrogenase, gamma subunit compare
Psest_2164 +0.3 2.1 Uncharacterized conserved protein compare
Psest_0368 +0.3 1.0 Transcriptional regulator compare
Psest_0675 +0.3 1.6 Predicted periplasmic lipoprotein compare
Psest_1078 +0.3 1.4 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) compare
Psest_2870 +0.3 1.9 TIGR00730 family protein compare
Psest_1179 +0.3 1.1 2-hydroxy-3-oxopropionate reductase compare
Psest_3545 +0.3 1.3 clan AA aspartic protease, TIGR02281 family compare
Psest_0174 +0.3 1.4 Uncharacterized protein conserved in bacteria compare
Psest_0644 +0.3 1.1 siderophore ferric iron reductase, AHA_1954 family compare
Psest_1463 +0.3 0.6 SufE protein probably involved in Fe-S center assembly compare
Psest_0732 +0.3 1.5 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_3520 +0.3 1.4 Short chain fatty acids transporter compare
Psest_1997 +0.3 0.9 6-phosphogluconolactonase compare
Psest_4078 +0.3 0.8 L-asparaginase/archaeal Glu-tRNAGln amidotransferase subunit D compare
Psest_4204 +0.3 1.8 hypothetical protein compare
Psest_1006 +0.3 1.8 dTDP-4-dehydrorhamnose reductase compare
Psest_1004 +0.3 2.2 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_0385 +0.3 0.9 Conserved secreted protein compare
Psest_2470 +0.3 1.2 hypothetical protein compare
Psest_3371 +0.3 1.8 type IV pilus modification protein PilV compare
Psest_3192 +0.3 2.2 diguanylate cyclase (GGDEF) domain compare
Psest_2247 +0.3 2.0 Protein-tyrosine-phosphatase compare
Psest_2173 +0.3 1.2 competence/damage-inducible protein CinA C-terminal domain compare
Psest_2138 +0.3 0.9 RND family efflux transporter, MFP subunit compare
Psest_2668 +0.3 1.4 Lactoylglutathione lyase and related lyases compare
Psest_0547 +0.3 1.3 Urease accessory protein UreF compare
Psest_1302 +0.3 1.2 Predicted thioesterase compare
Psest_2618 +0.3 1.2 Flp pilus assembly protein TadB compare
Psest_0526 +0.3 1.3 hypothetical protein compare
Psest_4067 +0.3 1.1 Predicted membrane protein compare
Psest_1152 +0.3 1.7 hypothetical protein compare
Psest_4390 +0.3 1.0 hypothetical protein compare
Psest_0833 +0.3 1.2 Transcriptional regulator containing GAF, AAA-type ATPase, and DNA binding domains compare
Psest_2853 +0.3 1.4 hypothetical protein compare
Psest_0922 +0.3 0.8 alkylhydroperoxidase AhpD family core domain compare
Psest_2216 +0.3 1.4 Acyl carrier protein compare
Psest_3372 +0.3 2.1 Tfp pilus assembly protein PilW compare
Psest_1214 +0.3 1.7 Cytosine deaminase and related metal-dependent hydrolases compare
Psest_3462 +0.3 1.2 Lipopolysaccharide kinase (Kdo/WaaP) family. compare
Psest_4328 +0.3 1.8 Cytochrome oxidase assembly factor compare
Psest_3955 +0.3 1.5 Uncharacterized protein conserved in bacteria compare
Psest_2639 +0.3 1.9 Protein of unknown function (DUF2489). compare
Psest_2798 +0.3 1.0 Truncated hemoglobins compare
Psest_0440 +0.3 1.2 hypothetical protein compare
Psest_2229 +0.3 0.7 Uncharacterized protein conserved in bacteria compare
Psest_4387 +0.3 1.0 hypothetical protein compare
Psest_1849 +0.3 1.4 Predicted glutamine amidotransferase compare
Psest_1940 +0.3 1.1 Uncharacterized protein containing a von Willebrand factor type A (vWA) domain compare
Psest_4054 +0.3 1.1 alkanesulfonate monooxygenase, FMNH(2)-dependent compare
Psest_2859 +0.3 1.8 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_4241 +0.3 1.0 hypothetical protein compare
Psest_1073 +0.3 1.2 TRAP-type mannitol/chloroaromatic compound transport system, small permease component compare
Psest_2923 +0.3 1.0 hypothetical protein compare
Psest_1035 +0.3 1.4 hypothetical protein compare
Psest_2423 +0.3 1.6 Uncharacterized conserved protein compare
Psest_1737 +0.3 1.6 flagellar biosynthesis protein FlhA compare
Psest_3857 +0.3 1.3 ATPases involved in chromosome partitioning compare
Psest_3546 +0.3 0.3 Phosphatidylglycerophosphatase A and related proteins compare
Psest_0367 +0.3 1.0 Predicted branched-chain amino acid permease (azaleucine resistance) compare
Psest_3209 +0.3 1.2 NADH:flavin oxidoreductases, Old Yellow Enzyme family compare
Psest_2280 +0.2 1.2 Predicted membrane protein compare
Psest_0327 +0.2 1.6 Transcriptional regulator compare
Psest_3753 +0.2 1.6 Acetyltransferases compare
Psest_3067 +0.2 1.8 hypothetical protein compare
Psest_0640 +0.2 1.5 Uncharacterized conserved protein compare
Psest_1981 +0.2 1.4 S-methyl-5-thioribose-1-phosphate isomerase compare
Psest_4023 +0.2 1.3 hypothetical protein compare
Psest_3196 +0.2 1.6 Phosphatidylserine/phosphatidylglycerophosphate/cardiolipin synthases and related enzymes compare
Psest_1267 +0.2 1.6 serine O-acetyltransferase compare


Specific Phenotypes

For 1 genes in this experiment

For stress Lead (II) nitrate in Pseudomonas stutzeri RCH2

For stress Lead (II) nitrate across organisms