Experiment set14H45 for Pseudomonas stutzeri RCH2

Compare to:

Anaerobic 50 uM Lead (II) nitrate sample2

200 most important genes:

  gene name fitness t score description  
Psest_2234 -3.7 -17.0 oxygen-independent coproporphyrinogen III oxidase compare
Psest_2579 -3.5 -8.0 amidophosphoribosyltransferase compare
Psest_3301 -3.4 -5.7 Predicted transcriptional regulator, BolA superfamily compare
Psest_3647 -3.3 -5.5 Indole-3-glycerol phosphate synthase compare
Psest_1473 -3.0 -8.3 phosphoribosylglycinamide formyltransferase, formyltetrahydrofolate-dependent compare
Psest_3720 -2.9 -20.2 penicillin-binding protein, 1A family compare
Psest_0814 -2.9 -3.9 MoxR-like ATPases compare
Psest_1295 -2.7 -8.9 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_2232 -2.6 -15.0 UTP-glucose-1-phosphate uridylyltransferase compare
Psest_0508 -2.5 -9.8 gamma-glutamyl phosphate reductase compare
Psest_1013 -2.5 -4.4 phosphoribosylamine--glycine ligase compare
Psest_0969 -2.4 -2.3 transcription elongation factor GreA compare
Psest_2304 -2.4 -2.9 Peptidyl-prolyl cis-trans isomerase (rotamase) - cyclophilin family compare
Psest_1656 -2.2 -2.4 NADH:ubiquinone oxidoreductase, Na(+)-translocating, B subunit compare
Psest_3384 -2.1 -10.0 glutamate 5-kinase compare
Psest_3159 -2.0 -7.8 phosphoribosylformylglycinamidine synthase, single chain form compare
Psest_0828 -1.9 -7.2 Nitric oxide reductase activation protein compare
Psest_1657 -1.8 -2.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, C subunit compare
Psest_1724 -1.8 -5.7 Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor) compare
Psest_2988 -1.8 -8.6 aspartate kinase, monofunctional class compare
Psest_0799 -1.8 -5.5 Uncharacterized protein involved in response to NO compare
Psest_3479 -1.8 -7.8 molybdenum cofactor synthesis domain compare
Psest_1655 -1.8 -3.6 NADH:ubiquinone oxidoreductase, Na(+)-translocating, A subunit compare
Psest_1532 -1.7 -3.8 DNA recombination-dependent growth factor C compare
Psest_1837 -1.7 -10.2 Endoglucanase compare
Psest_1115 -1.7 -4.6 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 2 compare
Psest_0062 -1.6 -2.7 tryptophan synthase, alpha subunit compare
Psest_1805 -1.6 -2.5 integration host factor, beta subunit compare
Psest_1474 -1.6 -2.2 phosphoribosylaminoimidazole synthetase compare
Psest_3650 -1.6 -9.9 anthranilate synthase component I, non-proteobacterial lineages compare
Psest_0063 -1.6 -2.8 tryptophan synthase, beta subunit compare
Psest_0954 -1.6 -7.5 Fe-S oxidoreductase compare
Psest_0529 -1.5 -8.2 Putative Mg2+ and Co2+ transporter CorC compare
Psest_3170 -1.5 -6.2 molybdenum cofactor biosynthesis protein MoaC compare
Psest_0952 -1.5 -2.7 Uncharacterized conserved protein compare
Psest_3484 -1.5 -6.8 nitrate reductase molybdenum cofactor assembly chaperone compare
Psest_1961 -1.4 -9.8 molybdopterin-guanine dinucleotide biosynthesis protein A, proteobacterial compare
Psest_0257 -1.4 -3.5 Predicted Zn-dependent peptidases compare
Psest_4405 -1.4 -1.7 hypothetical protein compare
Psest_1659 -1.4 -2.5 NADH:ubiquinone oxidoreductase, Na(+)-translocating, E subunit compare
Psest_1625 -1.4 -4.5 hypothetical protein compare
Psest_3226 -1.4 -2.2 Predicted membrane protein compare
Psest_0953 -1.3 -7.9 iron-sulfur cluster-binding protein compare
Psest_1511 -1.3 -5.2 Predicted redox protein, regulator of disulfide bond formation compare
Psest_1661 -1.3 -1.2 Membrane-associated lipoprotein involved in thiamine biosynthesis compare
Psest_1809 -1.3 -9.6 Membrane protein involved in the export of O-antigen and teichoic acid compare
Psest_2325 -1.3 -8.2 alpha-L-glutamate ligase-related protein compare
Psest_3480 -1.3 -1.9 molybdenum cofactor biosynthesis protein B, proteobacterial compare
Psest_2324 -1.3 -9.9 hypothetical protein compare
Psest_0144 -1.3 -5.1 Fe-S cluster protector protein compare
Psest_3486 -1.3 -11.0 respiratory nitrate reductase, alpha subunit compare
Psest_0827 -1.3 -10.0 Nitric oxide reductase large subunit compare
Psest_3483 -1.2 -6.8 respiratory nitrate reductase, gamma subunit compare
Psest_1822 -1.2 -6.8 Glycosyltransferases involved in cell wall biogenesis compare
Psest_2067 -1.2 -1.7 ABC-type oligopeptide transport system, periplasmic component compare
Psest_3762 -1.2 -3.5 iron donor protein CyaY compare
Psest_3485 -1.2 -9.6 nitrate reductase, beta subunit compare
Psest_0845 -1.2 -0.8 hypothetical protein compare
Psest_4098 -1.2 -2.8 Superfamily I DNA and RNA helicases compare
Psest_1292 -1.2 -5.6 monothiol glutaredoxin, Grx4 family compare
Psest_2104 -1.2 -0.8 IscR-regulated protein YhgI compare
Psest_1814 -1.2 -9.6 pseudaminic acid biosynthesis N-acetyl transferase compare
Psest_1686 -1.2 -4.7 fatty acid/phospholipid synthesis protein PlsX compare
Psest_3648 -1.2 -4.8 anthranilate phosphoribosyltransferase compare
Psest_3490 -1.2 -4.9 Signal transduction histidine kinase, nitrate/nitrite-specific compare
Psest_4191 -1.2 -1.9 Transcriptional regulator compare
Psest_1818 -1.1 -6.9 GDP-mannose 4,6-dehydratase compare
Psest_3998 -1.1 -5.0 glutamate--cysteine ligase compare
Psest_3843 -1.1 -6.2 4-hydroxybenzoate synthetase (chorismate lyase) compare
Psest_0955 -1.1 -4.6 D,L-lactate:H+ symporter (from data) compare
Psest_3113 -1.1 -1.6 electron transport complex, RnfABCDGE type, B subunit compare
Psest_0826 -1.1 -7.0 Cytochrome c compare
Psest_1496 -1.1 -1.3 Holliday junction DNA helicase, RuvA subunit compare
Psest_2329 -1.0 -8.6 Transcriptional regulator compare
Psest_2945 -1.0 -1.1 septum site-determining protein MinC compare
Psest_2651 -1.0 -1.8 DNA topoisomerase I, bacterial compare
Psest_3489 -1.0 -6.7 hypothetical protein compare
Psest_3795 -1.0 -5.9 Glycine/D-amino acid oxidases (deaminating) compare
Psest_3481 -1.0 -5.7 molybdenum cofactor biosynthesis protein A, bacterial compare
Psest_1819 -1.0 -8.2 Nucleoside-diphosphate-sugar epimerases compare
Psest_3745 -0.9 -2.8 Uncharacterized enzyme of heme biosynthesis compare
Psest_2490 -0.9 -6.6 succinyl-CoA synthetase, alpha subunit compare
Psest_0442 -0.9 -1.7 ATPases of the AAA+ class compare
Psest_3649 -0.9 -5.6 glutamine amidotransferase of anthranilate synthase or aminodeoxychorismate synthase compare
Psest_3488 -0.9 -3.4 Universal stress protein UspA and related nucleotide-binding proteins compare
Psest_1663 -0.9 -2.8 Pyruvate/2-oxoglutarate dehydrogenase complex, dihydrolipoamide dehydrogenase (E3) component, and related enzymes compare
Psest_1660 -0.9 -1.5 NADH:ubiquinone oxidoreductase, Na(+)-translocating, F subunit compare
Psest_3571 -0.9 -6.1 Outer membrane protein W compare
Psest_3092 -0.9 -1.4 ribonuclease III, bacterial compare
Psest_1999 -0.9 -1.5 pseudouridine synthase compare
Psest_2999 -0.9 -3.8 molybdenum ABC transporter, periplasmic molybdate-binding protein compare
Psest_3115 -0.9 -3.5 electron transport complex, RnfABCDGE type, D subunit compare
Psest_2491 -0.9 -4.7 succinyl-CoA synthetase, beta subunit compare
Psest_1509 -0.9 -5.7 quinolinate synthetase complex, A subunit compare
Psest_2584 -0.9 -3.7 Phosphoribosylanthranilate isomerase compare
Psest_0843 -0.9 -4.8 hypothetical protein compare
Psest_3908 -0.9 -1.7 Cytochrome c553 compare
Psest_1249 -0.8 -3.8 serine O-acetyltransferase compare
Psest_3044 -0.8 -4.0 deoxycytidine triphosphate deaminase compare
Psest_0836 -0.8 -4.7 Collagenase and related proteases compare
Psest_2136 -0.8 -5.9 Predicted homoserine dehydrogenase compare
Psest_1486 -0.8 -3.0 hypothetical protein compare
Psest_3231 -0.8 -2.7 hypothetical protein compare
Psest_0393 -0.8 -6.1 Methylase of chemotaxis methyl-accepting proteins compare
Psest_3487 -0.8 -5.3 Nitrate/nitrite transporter compare
Psest_1765 -0.8 -5.2 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_3766 -0.8 -1.7 Uncharacterized protein conserved in bacteria compare
Psest_3938 -0.8 -2.5 Uncharacterized protein conserved in bacteria compare
Psest_2850 -0.8 -1.7 Multisubunit Na+/H+ antiporter, MnhC subunit compare
Psest_4325 -0.8 -2.9 hypothetical protein compare
Psest_1920 -0.8 -1.4 Uncharacterized protein conserved in bacteria compare
Psest_0718 -0.8 -2.2 nicotinate-nucleotide pyrophosphorylase compare
Psest_0837 -0.8 -2.0 Putative lipid carrier protein compare
Psest_3168 -0.8 -2.2 Molybdopterin converting factor, large subunit compare
Psest_3351 -0.8 -2.5 peptide chain release factor 3 compare
Psest_0066 -0.8 -1.4 Protein of unknown function (DUF3060). compare
Psest_0259 -0.8 -1.4 cell division ATP-binding protein FtsE compare
Psest_1824 -0.8 -2.2 Sugar transferases involved in lipopolysaccharide synthesis compare
Psest_4350 -0.7 -2.9 Transcriptional regulators of sugar metabolism compare
Psest_0993 -0.7 -4.5 Glucose-6-phosphate isomerase compare
Psest_2766 -0.7 -1.4 hypothetical protein compare
Psest_0697 -0.7 -1.9 ribosomal protein L9 compare
Psest_0461 -0.7 -4.4 Glycosyltransferase involved in LPS biosynthesis compare
Psest_4310 -0.7 -2.0 ABC-type Mn2+/Zn2+ transport systems, permease components compare
Psest_0498 -0.7 -0.7 ribosome small subunit-dependent GTPase A compare
Psest_4363 -0.7 -3.6 ATPases involved in chromosome partitioning compare
Psest_3001 -0.7 -3.7 molybdenum ABC transporter, ATP-binding protein compare
Psest_1012 -0.7 -2.3 Signal transduction histidine kinase compare
Psest_2538 -0.7 -0.9 cAMP-binding proteins - catabolite gene activator and regulatory subunit of cAMP-dependent protein kinases compare
Psest_0835 -0.7 -5.5 Collagenase and related proteases compare
Psest_3927 -0.7 -2.8 thiazole biosynthesis/tRNA modification protein ThiI compare
Psest_2810 -0.7 -3.2 5'/3'-nucleotidase SurE compare
Psest_3767 -0.7 -2.4 tyrosine recombinase XerC compare
Psest_1947 -0.7 -0.6 dihydroorotate dehydrogenase, subfamily 2 compare
Psest_0958 -0.7 -2.8 Oligoketide cyclase/lipid transport protein compare
Psest_2001 -0.6 -1.1 2-phosphoglycolate phosphatase, prokaryotic compare
Psest_3862 -0.6 -5.0 phosphoenolpyruvate-protein phosphotransferase compare
Psest_1563 -0.6 -2.3 Protein of unknown function (DUF548). compare
Psest_3664 -0.6 -0.7 Predicted phosphotransferase related to Ser/Thr protein kinases compare
Psest_1643 -0.6 -1.4 hypothetical protein compare
Psest_1518 -0.6 -1.4 tRNA_Ser_CGA compare
Psest_0313 -0.6 -2.7 5,10-methylenetetrahydrofolate reductase, prokaryotic form compare
Psest_0459 -0.6 -4.0 Predicted carbamoyl transferase, NodU family compare
Psest_1815 -0.6 -4.7 pseudaminic acid synthase compare
Psest_0260 -0.6 -0.7 Cell division protein compare
Psest_0191 -0.6 -0.5 PAS domain S-box compare
Psest_1397 -0.6 -2.5 ABC-type nitrate/sulfonate/bicarbonate transport system, permease component compare
Psest_1692 -0.6 -4.0 conserved hypothetical protein, YceG family compare
Psest_2018 -0.6 -1.2 Uncharacterized conserved protein compare
Psest_2023 -0.6 -1.8 isocitrate dehydrogenase, NADP-dependent, monomeric type compare
Psest_3069 -0.6 -1.8 3-oxoadipate enol-lactonase compare
Psest_3000 -0.6 -3.6 molybdate ABC transporter, permease protein compare
Psest_3146 -0.6 -1.0 hypothetical protein compare
Psest_1772 -0.6 -2.3 Aspartate/tyrosine/aromatic aminotransferase compare
Psest_4003 -0.6 -2.5 TIGR00153 family protein compare
Psest_3398 -0.6 -2.4 large conductance mechanosensitive channel protein compare
Psest_3112 -0.6 -1.7 electron transport complex, RnfABCDGE type, A subunit compare
Psest_0831 -0.6 -1.1 hypothetical protein compare
Psest_0028 -0.5 -2.4 Coproporphyrinogen III oxidase compare
Psest_1812 -0.5 -4.1 pseudaminic acid CMP-transferase compare
Psest_2641 -0.5 -4.2 Conserved secreted protein compare
Psest_3991 -0.5 -1.3 Ribosome-associated heat shock protein implicated in the recycling of the 50S subunit (S4 paralog) compare
Psest_3482 -0.5 -2.6 Parvulin-like peptidyl-prolyl isomerase compare
Psest_3519 -0.5 -1.8 Uncharacterized conserved protein compare
Psest_1909 -0.5 -2.5 Phosphohistidine phosphatase SixA compare
Psest_0297 -0.5 -2.7 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_1447 -0.5 -2.2 Putative threonine efflux protein compare
Psest_1506 -0.5 -2.6 queuosine biosynthesis protein QueC compare
Psest_3346 -0.5 -4.5 TonB-dependent siderophore receptor compare
Psest_3474 -0.5 -2.2 Short-chain dehydrogenases of various substrate specificities compare
Psest_1879 -0.5 -1.5 Trk-type K+ transport systems, membrane components compare
Psest_2066 -0.5 -1.1 ABC-type uncharacterized transport system, permease component compare
Psest_4124 -0.5 -1.6 hypothetical protein compare
Psest_1813 -0.5 -3.7 pseudaminic acid biosynthesis-associated protein PseG compare
Psest_3881 -0.5 -1.2 hypothetical protein compare
Psest_2323 -0.5 -3.7 Uncharacterized protein conserved in archaea compare
Psest_0161 -0.5 -1.1 Membrane-bound metallopeptidase compare
Psest_3222 -0.5 -1.8 Putative threonine efflux protein compare
Psest_0609 -0.5 -1.1 hypothetical protein compare
Psest_0673 -0.5 -1.8 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl-meso-diaminopimelate ligase compare
Psest_3550 -0.5 -1.3 3,4-dihydroxy-2-butanone 4-phosphate synthase compare
Psest_3174 -0.5 -4.1 mannose-1-phosphate guanylyltransferase/mannose-6-phosphate isomerase compare
Psest_3904 -0.5 -1.0 hypothetical protein compare
Psest_0376 -0.5 -2.4 glucarate dehydratase compare
Psest_2775 -0.5 -0.4 Glycerol-3-phosphate dehydrogenase compare
Psest_0462 -0.5 -4.6 Lipid A core - O-antigen ligase and related enzymes compare
Psest_1890 -0.5 -3.1 Uncharacterized conserved protein compare
Psest_1160 -0.5 -1.8 Uncharacterized conserved protein compare
Psest_0558 -0.5 -0.8 urease, beta subunit compare
Psest_0737 -0.5 -0.8 Cu(I)-responsive transcriptional regulator compare
Psest_2405 -0.5 -2.0 NAD-dependent protein deacetylases, SIR2 family compare
Psest_0507 -0.5 -2.1 Uncharacterized membrane-associated protein compare
Psest_3662 -0.5 -1.7 DnaJ-domain-containing proteins 1 compare
Psest_1974 -0.5 -1.5 integration host factor, alpha subunit compare
Psest_0722 -0.5 -2.4 Predicted ATPase compare
Psest_2778 -0.5 -1.7 Parvulin-like peptidyl-prolyl isomerase compare
Psest_3322 -0.5 -4.2 TIGR02099 family protein compare
Psest_2864 -0.5 -2.0 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_0800 -0.5 -2.7 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_2923 -0.5 -1.6 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas stutzeri RCH2 in stress experiments

For stress Lead (II) nitrate across organisms