Experiment set14H41 for Pseudomonas stutzeri RCH2

Compare to:

Anaerobic 500 uM Zinc chloride sample2

200 most detrimental genes:

  gene name fitness t score description  
Psest_0845 +2.1 2.5 hypothetical protein compare
Psest_0511 +1.0 1.7 rRNA large subunit m3Psi methyltransferase RlmH compare
Psest_0520 +1.0 1.7 hypothetical protein compare
Psest_0164 +1.0 1.2 Glutaredoxin, GrxC family compare
Psest_0999 +1.0 2.9 Response regulator containing CheY-like receiver, AAA-type ATPase, and DNA-binding domains compare
Psest_3531 +0.9 1.7 Peptidase propeptide and YPEB domain. compare
Psest_2714 +0.9 1.4 7-cyano-7-deazaguanine reductase compare
Psest_1923 +0.8 4.6 adhesin-associated BNR repeat protein (from data) compare
Psest_3790 +0.7 4.9 Cytochrome c5 compare
Psest_0260 +0.7 1.4 Cell division protein compare
Psest_2240 +0.7 2.5 hypothetical protein compare
Psest_0119 +0.7 2.3 hypothetical protein compare
Psest_4307 +0.7 2.3 ABC-type Zn2+ transport system, periplasmic component/surface adhesin compare
Psest_0844 +0.6 2.6 High-affinity Fe2+/Pb2+ permease compare
Psest_1997 +0.6 2.7 6-phosphogluconolactonase compare
Psest_2744 +0.6 1.8 Uncharacterized conserved protein compare
Psest_3670 +0.6 5.2 bis(5'-nucleosyl)-tetraphosphatase (symmetrical) compare
Psest_0846 +0.6 2.0 Uncharacterized protein probably involved in high-affinity Fe2+ transport compare
Psest_3185 +0.6 1.5 MoxR-like ATPases compare
Psest_0417 +0.6 1.4 Acyl-CoA dehydrogenases compare
Psest_1016 +0.6 3.2 putative TIM-barrel protein, nifR3 family compare
Psest_3784 +0.6 2.1 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_2906 +0.6 2.8 tRNA_Thr_CGT compare
Psest_0644 +0.6 2.1 siderophore ferric iron reductase, AHA_1954 family compare
Psest_3731 +0.6 5.0 exopolyphosphatase compare
Psest_2566 +0.6 1.1 Uncharacterized protein conserved in bacteria compare
Psest_2370 +0.6 2.2 Protein of unknown function (DUF1652). compare
Psest_4273 +0.6 2.2 Lysophospholipase compare
Psest_1354 +0.5 1.3 Uncharacterized protein conserved in bacteria compare
Psest_4197 +0.5 2.5 general secretion pathway protein J compare
Psest_0115 +0.5 1.5 Predicted integral membrane protein compare
Psest_3973 +0.5 1.3 Anti-sigma regulatory factor (Ser/Thr protein kinase) compare
Psest_3910 +0.5 1.3 Uncharacterized protein conserved in bacteria compare
Psest_2667 +0.5 2.2 Uncharacterized protein involved in propionate catabolism compare
Psest_1768 +0.5 2.0 thiopurine S-methyltransferase, Se/Te detoxification family compare
Psest_0060 +0.5 2.0 Predicted Fe-S protein compare
Psest_0503 +0.5 1.9 Acyl dehydratase compare
Psest_3455 +0.5 1.8 Dihaem cytochrome c. compare
Psest_0678 +0.5 1.8 yjeF C-terminal region, hydroxyethylthiazole kinase-related/yjeF N-terminal region compare
Psest_2122 +0.5 1.6 Parvulin-like peptidyl-prolyl isomerase compare
Psest_3400 +0.5 1.2 Copper resistance protein D. compare
Psest_1357 +0.5 2.4 Uncharacterized protein conserved in bacteria compare
Psest_2786 +0.5 0.9 Domain of unknown function (DUF3597). compare
Psest_3780 +0.5 1.6 Transcriptional regulator compare
Psest_0692 +0.5 1.3 rRNA methylase, putative, group 3 compare
Psest_1986 +0.5 1.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
Psest_2243 +0.5 0.7 glyceraldehyde-3-phosphate dehydrogenase, type I compare
Psest_1872 +0.4 2.0 selT/selW/selH selenoprotein domain compare
Psest_4177 +0.4 1.2 flagellar biosynthetic protein FliP compare
Psest_3139 +0.4 2.1 Carbonic anhydrases/acetyltransferases, isoleucine patch superfamily compare
Psest_2671 +0.4 1.9 Transcriptional regulator compare
Psest_0861 +0.4 2.5 hypothetical protein compare
Psest_0867 +0.4 0.9 hypothetical protein compare
Psest_3014 +0.4 1.3 cob(I)alamin adenosyltransferase compare
Psest_0771 +0.4 3.6 Acyl-CoA hydrolase compare
Psest_3247 +0.4 1.2 Uncharacterized membrane protein compare
Psest_2545 +0.4 1.5 recombination protein RecR compare
Psest_0094 +0.4 1.5 Uncharacterized enzyme of phosphonate metabolism compare
Psest_2618 +0.4 2.0 Flp pilus assembly protein TadB compare
Psest_4338 +0.4 2.5 Fe2+-dicitrate sensor, membrane component compare
Psest_1349 +0.4 1.3 Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) compare
Psest_1000 +0.4 3.5 PAS domain S-box compare
Psest_1994 +0.4 2.0 Amidases related to nicotinamidase compare
Psest_3399 +0.4 1.0 Uncharacterized protein conserved in bacteria compare
Psest_1782 +0.4 1.1 Predicted transcriptional regulators compare
Psest_2899 +0.4 1.0 hypothetical protein compare
Psest_3702 +0.4 2.0 Predicted 3-hydroxylacyl-(acyl carrier protein) dehydratase compare
Psest_4149 +0.4 1.7 fagellar hook-basal body proteins compare
Psest_0390 +0.4 1.3 Short-chain dehydrogenases of various substrate specificities compare
Psest_0652 +0.4 1.7 ABC-type nitrate/sulfonate/bicarbonate transport systems, periplasmic components compare
Psest_4168 +0.4 1.5 Flagellar FliJ protein. compare
Psest_0309 +0.4 0.6 RND family efflux transporter, MFP subunit compare
Psest_3114 +0.4 2.1 electron transport complex, RnfABCDGE type, C subunit compare
Psest_4411 +0.4 1.7 Phage terminase, small subunit compare
Psest_1279 +0.4 1.9 hypothetical protein compare
Psest_0759 +0.4 1.1 Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT). compare
Psest_2520 +0.4 0.7 Predicted SAM-dependent methyltransferase compare
Psest_3960 +0.4 0.8 3'(2'),5'-bisphosphate nucleotidase, bacterial compare
Psest_2720 +0.4 1.8 Enoyl-CoA hydratase/carnithine racemase compare
Psest_1468 +0.4 1.1 hypothetical protein compare
Psest_0662 +0.4 0.9 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_1551 +0.4 1.6 Integral membrane protein, interacts with FtsH compare
Psest_3189 +0.4 2.0 hypothetical protein compare
Psest_1879 +0.4 1.4 Trk-type K+ transport systems, membrane components compare
Psest_1053 +0.4 1.6 hypothetical protein compare
Psest_0061 +0.4 1.5 hypothetical protein compare
Psest_2748 +0.4 1.2 Transcriptional regulator compare
Psest_3107 +0.4 1.8 uracil-DNA glycosylase compare
Psest_3816 +0.4 0.7 DNA-directed RNA polymerase, omega subunit compare
Psest_2757 +0.4 0.7 hypothetical protein compare
Psest_3803 +0.4 0.7 DNA repair protein radc compare
Psest_3476 +0.4 0.5 Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain compare
Psest_0842 +0.4 1.0 anaerobic ribonucleoside-triphosphate reductase activating protein compare
Psest_0538 +0.4 3.4 Signal transduction histidine kinase compare
Psest_0057 +0.4 1.7 Predicted transcriptional regulators compare
Psest_2855 +0.4 0.8 Outer membrane protein and related peptidoglycan-associated (lipo)proteins compare
Psest_1388 +0.4 0.7 Uncharacterized protein conserved in bacteria compare
Psest_3921 +0.4 1.0 Uncharacterized protein conserved in bacteria compare
Psest_3177 +0.3 1.2 hypothetical protein compare
Psest_3881 +0.3 1.0 hypothetical protein compare
Psest_2037 +0.3 1.6 uroporphyrin-III C-methyltransferase compare
Psest_1280 +0.3 3.0 TonB-dependent copper receptor compare
Psest_0724 +0.3 2.0 Deoxyinosine 3'endonuclease (endonuclease V) compare
Psest_2798 +0.3 1.5 Truncated hemoglobins compare
Psest_3017 +0.3 1.9 Predicted phosphohydrolases compare
Psest_0275 +0.3 1.6 Protein of unknown function (DUF3392). compare
Psest_1631 +0.3 0.6 Uncharacterized conserved small protein compare
Psest_3853 +0.3 0.9 ABC-type branched-chain amino acid transport systems, ATPase component compare
Psest_1721 +0.3 1.4 Flagellar biosynthesis/type III secretory pathway protein compare
Psest_1901 +0.3 1.9 hypothetical protein compare
Psest_3768 +0.3 1.9 haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED/haloacid dehalogenase superfamily, subfamily IA, variant 1 with third motif having Dx(3-4)D or Dx(3-4)E compare
Psest_0357 +0.3 0.9 Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) compare
Psest_2120 +0.3 1.2 Transcriptional regulator compare
Psest_4275 +0.3 2.5 Outer membrane receptor for ferrienterochelin and colicins compare
Psest_2736 +0.3 1.7 Transposase and inactivated derivatives compare
Psest_3692 +0.3 1.3 Acyl-coenzyme A synthetases/AMP-(fatty) acid ligases compare
Psest_3978 +0.3 2.7 hypothetical protein compare
Psest_1195 +0.3 1.4 xanthine permease compare
Psest_0093 +0.3 1.4 Uncharacterized enzyme of phosphonate metabolism compare
Psest_0732 +0.3 1.6 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_2150 +0.3 1.2 DNA polymerase LigD, polymerase domain compare
Psest_2907 +0.3 0.5 Protein of unknown function (DUF3618). compare
Psest_1152 +0.3 1.3 hypothetical protein compare
Psest_3250 +0.3 1.0 Rho termination factor, N-terminal domain. compare
Psest_3464 +0.3 2.4 Signal transduction histidine kinase compare
Psest_1118 +0.3 1.0 Predicted Fe-S-cluster oxidoreductase compare
Psest_0187 +0.3 1.5 Metal-dependent hydrolase compare
Psest_2365 +0.3 1.3 ABC-type nitrate/sulfonate/bicarbonate transport system, ATPase component compare
Psest_3453 +0.3 2.3 Flavodoxin reductases (ferredoxin-NADPH reductases) family 1 compare
Psest_2647 +0.3 0.8 SOS-response cell division inhibitor, blocks FtsZ ring formation compare
Psest_4088 +0.3 1.3 Transcriptional regulators compare
Psest_0277 +0.3 0.6 non-canonical purine NTP pyrophosphatase, rdgB/HAM1 family compare
Psest_2723 +0.3 1.4 Uncharacterized conserved protein compare
Psest_3823 +0.3 1.7 hypothetical protein compare
Psest_3890 +0.3 0.8 Multisubunit Na+/H+ antiporter, MnhB subunit compare
Psest_2912 +0.3 1.9 Uncharacterized conserved protein compare
Psest_3508 +0.3 2.0 Putative intracellular protease/amidase compare
Psest_3992 +0.3 2.2 Uncharacterized protein conserved in archaea compare
Psest_2909 +0.3 1.3 hypothetical protein compare
Psest_2455 +0.3 2.1 Acyl-CoA thioesterase compare
Psest_3550 +0.3 1.2 3,4-dihydroxy-2-butanone 4-phosphate synthase compare
Psest_3908 +0.3 0.8 Cytochrome c553 compare
Psest_0857 +0.3 1.0 Membrane transporters of cations and cationic drugs compare
Psest_1718 +0.3 1.7 flagellar hook-basal body complex protein FliE compare
Psest_1874 +0.3 1.4 AraC-type DNA-binding domain-containing proteins compare
Psest_3022 +0.3 1.2 Predicted membrane protein compare
Psest_0086 +0.3 1.3 hypothetical protein compare
Psest_2672 +0.3 2.0 Predicted membrane protein compare
Psest_1078 +0.3 1.4 acetyl-CoA:acetoacetate CoA transferase, A subunit (EC 2.8.3.8) (from data) compare
Psest_0311 +0.3 1.6 efflux transporter, outer membrane factor (OMF) lipoprotein, NodT family compare
Psest_1077 +0.3 2.1 acetyl-CoA:acetoacetate CoA transferase, B subunit (EC 2.8.3.8) (from data) compare
Psest_3209 +0.3 1.7 NADH:flavin oxidoreductases, Old Yellow Enzyme family compare
Psest_1173 +0.3 1.3 hypothetical protein compare
Psest_1750 +0.3 1.2 Protein of unknown function (DUF2802). compare
Psest_0040 +0.3 1.7 Protein of unknown function (DUF2934). compare
Psest_2416 +0.3 1.9 3-phytase (myo-inositol-hexaphosphate 3-phosphohydrolase) compare
Psest_2527 +0.3 1.5 cytochrome c oxidase, cbb3-type, subunit I compare
Psest_3655 +0.3 1.9 ABC-type spermidine/putrescine transport system, permease component II compare
Psest_0212 +0.3 0.8 exodeoxyribonuclease V, gamma subunit compare
Psest_1885 +0.3 1.2 hypothetical protein compare
Psest_4216 +0.3 1.5 hypothetical protein compare
Psest_1775 +0.3 1.4 Predicted ATPase (AAA+ superfamily) compare
Psest_2441 +0.3 2.0 hypothetical protein compare
Psest_2154 +0.3 1.3 formate dehydrogenase accessory protein FdhE compare
Psest_3203 +0.3 1.3 hypothetical protein compare
Psest_3792 +0.3 1.1 Putative translation initiation inhibitor, yjgF family compare
Psest_1161 +0.3 1.1 E3 Ubiquitin ligase. compare
Psest_1924 +0.3 2.4 adhesin-associated MmpL efflux pump (from data) compare
Psest_0006 +0.3 1.3 alkyl hydroperoxide reductase, F subunit compare
Psest_1052 +0.3 1.1 Uncharacterized protein involved in chromosome partitioning compare
Psest_4366 +0.3 1.5 Multisubunit Na+/H+ antiporter, MnhG subunit compare
Psest_1122 +0.3 2.3 putative adhesin (DUF1302) (from data) compare
Psest_2445 +0.3 1.8 2-methylbutanoyl-CoA dehydrogenase (EC 1.3.8.5) (from data) compare
Psest_4201 +0.3 0.7 general secretion pathway protein F compare
Psest_1076 +0.3 1.5 acetyl-CoA acetyltransferases compare
Psest_4287 +0.3 1.6 Predicted glutamine amidotransferases compare
Psest_2680 +0.3 1.3 transcriptional regulator, BolA protein family compare
Psest_0536 +0.3 1.7 thiamine-phosphate pyrophosphorylase compare
Psest_3213 +0.3 1.7 acetate kinase compare
Psest_3955 +0.3 1.1 Uncharacterized protein conserved in bacteria compare
Psest_3235 +0.3 2.3 Protein of unknown function (DUF1329). compare
Psest_1516 +0.3 0.7 Uncharacterized lipoprotein compare
Psest_1598 +0.3 1.2 heavy metal response regulator compare
Psest_1762 +0.3 1.0 cytochrome c-type biogenesis protein CcmI compare
Psest_1200 +0.3 1.6 putative urate catabolism protein compare
Psest_0316 +0.3 0.7 Cytochrome c556 compare
Psest_0012 +0.3 1.3 DNA-3-methyladenine glycosylase I compare
Psest_3372 +0.3 1.9 Tfp pilus assembly protein PilW compare
Psest_3913 +0.3 0.9 hypothetical protein compare
Psest_3048 +0.2 1.0 hypothetical protein compare
Psest_1366 +0.2 0.8 hypothetical protein compare
Psest_1504 +0.2 1.2 tol-pal system protein YbgF compare
Psest_2048 +0.2 1.3 Response regulator containing a CheY-like receiver domain and an HTH DNA-binding domain compare
Psest_1022 +0.2 1.6 Thiol:disulfide interchange protein compare
Psest_1460 +0.2 1.6 Cytochrome c553 compare
Psest_2133 +0.2 1.9 Uncharacterized protein conserved in bacteria compare
Psest_0015 +0.2 0.9 Tetratricopeptide repeat. compare
Psest_1925 +0.2 1.8 uroporphyrin-III C-methyltransferase compare
Psest_2487 +0.2 1.8 uncharacterized domain 1 compare
Psest_3005 +0.2 1.0 Fructose-2,6-bisphosphatase compare


Specific Phenotypes

For 11 genes in this experiment

For stress Zinc chloride in Pseudomonas stutzeri RCH2

For stress Zinc chloride across organisms