Experiment set13S90 for Phocaeicola vulgatus CL09T03C04

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Arabinoxylan (Rye Flour) 2.5 mg/ml carbon source

Group: carbon source
Media: Varel_Bryant_medium + Arabinoxylan (Rye Flour) (2.5 mg/ml)
Culturing: Bvulgatus_CL09T03C04_ML5, 96 deep-well microplate; 1.2 mL volume, Anaerobic, at 37 (C), shaken=0 rpm
By: Surya on 6/18/25
Media components: 15 uM Hemin, 134 uM L-Methionine, 15 uM Iron (II) sulfate heptahydrate, 8.25 mM L-Cysteine, 23.8 mM Sodium bicarbonate, Mineral 3B solution (6.6 mM Potassium phosphate monobasic, 15.4 mM Sodium Chloride, 98 uM Magnesium chloride hexahydrate, 176.5 uM Calcium chloride dihydrate, 4.2 uM Cobalt chloride hexahydrate, 50.5 uM Manganese (II) chloride tetrahydrate, 9.3 mM Ammonium chloride, 1.75 mM Sodium sulfate)

Specific Phenotypes

For 2 genes in this experiment

For carbon source Arabinoxylan (Rye Flour) in Phocaeicola vulgatus CL09T03C04

For carbon source Arabinoxylan (Rye Flour) across organisms

SEED Subsystems

Subsystem #Specific
Multidrug Resistance Efflux Pumps 1
Multidrug efflux pump in Campylobacter jejuni (CmeABC operon) 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.