Experiment set13S663 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS06895 -4.7 -1.4 selenocysteine-specific translation elongation factor compare
MMP_RS02900 -4.0 -0.7 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS05550 -3.9 -0.7 cation:proton antiporter compare
MMP_RS06885 -3.8 -2.8 50S ribosome-binding GTPase compare
MMP_RS01325 -3.4 -2.2 dihydroneopterin aldolase family protein compare
MMP_RS08300 -3.3 -1.0 metal-sulfur cluster assembly factor compare
MMP_RS02280 -3.3 -1.0 DUF211 domain-containing protein compare
MMP_RS04890 -3.1 -0.8 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03580 -3.1 -3.6 signal recognition particle-docking protein FtsY compare
MMP_RS08720 -3.1 -1.5 4Fe-4S binding protein compare
MMP_RS00695 -3.1 -0.8 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS07635 -3.1 -7.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08715 -3.0 -2.0 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06285 -3.0 -2.1 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS01005 -3.0 -1.0 riboflavin synthase compare
MMP_RS08635 -3.0 -1.7 UbiA family prenyltransferase compare
MMP_RS00320 -2.9 -2.0 class I SAM-dependent methyltransferase compare
MMP_RS02240 -2.8 -2.9 methanogenesis marker 7 protein compare
MMP_RS00300 -2.8 -0.7 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08460 -2.6 -2.8 proteasome-activating nucleotidase compare
MMP_RS06625 -2.6 -2.1 DNA primase compare
MMP_RS02175 -2.6 -1.0 DUF1611 domain-containing protein compare
MMP_RS00110 -2.5 -2.4 hypothetical protein compare
MMP_RS03205 -2.4 -1.6 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS08645 -2.4 -9.2 UPF0179 family protein compare
MMP_RS05845 -2.4 -1.8 tRNA-intron lyase compare
MMP_RS01720 -2.4 -2.2 replication factor C large subunit compare
MMP_RS06630 -2.4 -0.6 UPF0058 family protein compare
MMP_RS06730 -2.4 -2.0 phosphopantothenate/pantothenate synthetase compare
MMP_RS07005 -2.3 -0.6 4Fe-4S binding protein compare
MMP_RS01020 -2.3 -1.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS04585 -2.3 -10.6 AIR synthase related protein compare
MMP_RS06230 -2.3 -2.8 helix-turn-helix domain-containing protein compare
MMP_RS04685 -2.2 -2.8 DUF126 domain-containing protein compare
MMP_RS01755 -2.2 -0.9 DUF2097 domain-containing protein compare
MMP_RS04775 -2.2 -3.3 adenosylhomocysteinase compare
MMP_RS06020 -2.1 -3.9 archaeoflavoprotein AfpA compare
MMP_RS06295 -2.1 -5.9 methanogenesis marker 14 protein compare
MMP_RS07600 -2.1 -2.0 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS00685 -2.1 -4.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS03400 -2.1 -2.1 archease compare
MMP_RS02815 -2.1 -2.3 hypothetical protein compare
MMP_RS01500 -2.1 -1.6 CBS domain-containing protein compare
MMP_RS00895 -2.0 -3.7 hypothetical protein compare
MMP_RS07605 -2.0 -2.3 diadenylate cyclase compare
MMP_RS07445 -2.0 -7.8 helix-turn-helix domain-containing protein compare
MMP_RS08435 -2.0 -1.9 Era-like GTP-binding protein compare
MMP_RS02165 -1.9 -7.7 tRNA-dihydrouridine synthase compare
MMP_RS00115 -1.9 -12.7 radical SAM protein compare
MMP_RS06475 -1.9 -5.2 FAD-dependent oxidoreductase compare
MMP_RS01610 -1.9 -2.4 hypothetical protein compare
MMP_RS01800 -1.9 -2.8 TIGR00303 family protein compare
MMP_RS04780 -1.9 -2.5 ribonuclease P compare
MMP_RS05245 -1.8 -10.1 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS07625 -1.8 -3.2 cobalt ECF transporter T component CbiQ compare
MMP_RS03450 -1.8 -2.6 glycine synthesis protein GlyXS (from data) compare
MMP_RS01335 -1.8 -1.7 prefoldin subunit beta compare
MMP_RS06110 -1.8 -3.3 ATP-dependent protease LonB compare
MMP_RS03445 -1.8 -0.9 methanogenesis marker 17 protein compare
MMP_RS00295 -1.8 -1.9 gamma carbonic anhydrase family protein compare
MMP_RS07615 -1.7 -6.4 energy-coupling factor ABC transporter permease compare
MMP_RS03555 -1.7 -7.3 transcriptional regulator compare
MMP_RS07755 -1.7 -1.1 DUF555 domain-containing protein compare
MMP_RS06400 -1.7 -1.1 4Fe-4S binding protein compare
MMP_RS08820 -1.7 -5.2 hypothetical protein compare
MMP_RS06120 -1.7 -2.4 UPF0147 family protein compare
MMP_RS07200 -1.7 -5.1 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07630 -1.7 -1.4 ATP-binding cassette domain-containing protein compare
MMP_RS07525 -1.7 -6.3 4Fe-4S binding protein compare
MMP_RS07425 -1.6 -5.8 GTP-binding protein compare
MMP_RS06270 -1.6 -4.3 TIGR00300 family protein compare
MMP_RS07580 -1.6 -2.6 DUF356 domain-containing protein compare
MMP_RS03035 -1.6 -3.4 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS01100 -1.6 -1.5 ABC transporter ATP-binding protein compare
MMP_RS03095 -1.6 -4.6 diphthine synthase compare
MMP_RS03475 -1.6 -0.5 hypothetical protein compare
MMP_RS02875 -1.6 -7.3 chorismate pyruvate-lyase family protein compare
MMP_RS08785 -1.5 -0.9 RNA-protein complex protein Nop10 compare
MMP_RS03340 -1.5 -1.0 ABC transporter ATP-binding protein compare
MMP_RS05430 -1.5 -3.6 TIGR00288 family NYN domain-containing protein compare
MMP_RS03640 -1.5 -2.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07765 -1.5 -6.4 sodium:alanine symporter family protein compare
MMP_RS05920 -1.5 -0.4 50S ribosomal protein L37e compare
MMP_RS03435 -1.5 -1.5 ketol-acid reductoisomerase compare
MMP_RS03600 -1.5 -1.6 triose-phosphate isomerase compare
MMP_RS07700 -1.5 -7.7 DUF1188 domain-containing protein compare
MMP_RS01700 -1.5 -0.9 dihydroxy-acid dehydratase compare
MMP_RS00305 -1.5 -1.5 phosphoribosyl-ATP diphosphatase compare
MMP_RS05865 -1.5 -2.7 hypothetical protein compare
MMP_RS05765 -1.5 -4.1 M42 family metallopeptidase compare
MMP_RS06725 -1.4 -4.9 hypothetical protein compare
MMP_RS01175 -1.4 -2.2 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS05250 -1.4 -2.5 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00735 -1.4 -2.8 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00730 -1.4 -4.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS01985 -1.4 -3.3 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS08265 -1.4 -4.2 rubrerythrin compare
MMP_RS07620 -1.4 -4.3 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS01980 -1.4 -7.1 trimeric intracellular cation channel family protein compare
MMP_RS06855 -1.3 -7.1 hypothetical protein compare
MMP_RS00810 -1.3 -5.2 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS04990 -1.3 -4.5 aquaporin family protein compare
MMP_RS03910 -1.3 -1.5 hypothetical protein compare
MMP_RS08790 -1.3 -2.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS03300 -1.3 -0.6 TOBE domain-containing protein compare
MMP_RS00050 -1.3 -4.0 AarF/UbiB family protein compare
MMP_RS00315 -1.3 -3.5 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS01250 -1.3 -4.8 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS05265 -1.3 -1.7 2-isopropylmalate synthase compare
MMP_RS05545 -1.3 -4.5 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS01665 -1.3 -2.0 DUF2111 domain-containing protein compare
MMP_RS06325 -1.2 -1.2 hypothetical protein compare
MMP_RS00520 -1.2 -1.2 RNA polymerase Rpb4 family protein compare
MMP_RS03385 -1.2 -0.8 cation diffusion facilitator family transporter compare
MMP_RS03110 -1.2 -3.2 glycosyltransferase family 2 protein compare
MMP_RS06215 -1.2 -2.2 30S ribosomal protein S6e compare
MMP_RS02195 -1.2 -2.2 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS00900 -1.2 -1.1 50S ribosomal protein L39e compare
MMP_RS07380 -1.2 -1.0 transcription elongation factor Spt5 compare
MMP_RS01380 -1.2 -2.4 PHP domain-containing protein compare
MMP_RS02170 -1.2 -2.8 CBS domain-containing protein compare
MMP_RS08200 -1.2 -7.5 archaeosine synthase subunit alpha compare
MMP_RS05795 -1.1 -3.6 redox-regulated ATPase YchF compare
MMP_RS02245 -1.1 -2.4 hypothetical protein compare
MMP_RS04850 -1.1 -7.5 UPF0254 family protein compare
MMP_RS06015 -1.1 -5.2 flavodoxin family protein compare
MMP_RS04870 -1.1 -2.8 TIGR02253 family HAD-type hydrolase compare
MMP_RS06200 -1.1 -5.1 M24 family metallopeptidase compare
MMP_RS01795 -1.1 -0.7 methanogenesis marker 6 protein compare
MMP_RS00725 -1.1 -4.7 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS06930 -1.1 -5.4 MBL fold metallo-hydrolase compare
MMP_RS08210 -1.1 -0.9 phosphatidylglycerophosphatase A compare
MMP_RS03960 -1.1 -0.6 hypothetical protein compare
MMP_RS02235 -1.1 -4.3 CBS domain-containing protein compare
MMP_RS06340 -1.1 -4.2 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS00675 -1.0 -0.7 nitroreductase family protein compare
MMP_RS02935 -1.0 -1.4 A24 family peptidase compare
MMP_RS02745 -1.0 -1.6 hypothetical protein compare
MMP_RS06975 -1.0 -1.3 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07365 -1.0 -6.0 2-phosphoglycerate kinase compare
MMP_RS06865 -1.0 -1.4 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS01220 -1.0 -3.6 hypothetical protein compare
MMP_RS07845 -1.0 -1.0 LL-diaminopimelate aminotransferase compare
MMP_RS07775 -1.0 -3.2 alanine dehydrogenase compare
MMP_RS05875 -1.0 -2.3 hydroxyethylthiazole kinase compare
MMP_RS06485 -1.0 -0.6 zinc ribbon domain-containing protein compare
MMP_RS08440 -0.9 -1.1 cell division protein SepF compare
MMP_RS01225 -0.9 -2.1 DUF5379 domain-containing protein compare
MMP_RS05540 -0.9 -1.7 hypothetical protein compare
MMP_RS06005 -0.9 -1.9 heavy-metal-associated domain-containing protein compare
MMP_RS01365 -0.9 -1.7 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00310 -0.9 -4.6 CBS domain-containing protein compare
MMP_RS01840 -0.9 -3.3 TIGR00289 family protein compare
MMP_RS07685 -0.8 -3.4 TIGR01212 family radical SAM protein compare
MMP_RS08225 -0.8 -3.3 RimK family alpha-L-glutamate ligase compare
MMP_RS05510 -0.8 -3.3 Rrf2 family transcriptional regulator compare
MMP_RS04060 -0.8 -2.9 hypothetical protein compare
MMP_RS05930 -0.8 -1.2 3-isopropylmalate dehydratase large subunit compare
MMP_RS00130 -0.8 -0.7 nickel-responsive transcriptional regulator NikR compare
MMP_RS03315 -0.8 -0.5 ferrous iron transport protein A compare
MMP_RS00430 -0.8 -1.1 hypothetical protein compare
MMP_RS01265 -0.8 -0.8 hypothetical protein compare
MMP_RS06175 -0.8 -2.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS08105 -0.8 -3.2 6-carboxyhexanoate--CoA ligase compare
MMP_RS06680 -0.8 -4.3 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS02345 -0.8 -1.7 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06685 -0.8 -3.8 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS08570 -0.8 -3.4 coenzyme F420-0:L-glutamate ligase compare
MMP_RS04980 -0.8 -4.4 DUF2193 domain-containing protein compare
MMP_RS07575 -0.8 -1.0 RNA ligase partner protein compare
MMP_RS08195 -0.8 -3.0 hypothetical protein compare
MMP_RS06460 -0.7 -1.6 pyrimidine dimer DNA glycosylase/endonuclease V compare
MMP_RS02145 -0.7 -2.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS06735 -0.7 -2.5 class I SAM-dependent rRNA methyltransferase compare
MMP_RS02340 -0.7 -1.2 DNA-directed RNA polymerase subunit E'' compare
MMP_RS02940 -0.7 -1.8 TatD family hydrolase compare
MMP_RS05090 -0.7 -3.5 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS01030 -0.7 -1.4 MTAP family purine nucleoside phosphorylase compare
MMP_RS03470 -0.7 -4.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS00855 -0.7 -2.7 DUF367 family protein compare
MMP_RS05285 -0.7 -2.4 MMPL family transporter compare
MMP_RS00620 -0.7 -2.3 4Fe-4S binding protein compare
MMP_RS01990 -0.7 -1.2 hypothetical protein compare
MMP_RS01545 -0.7 -0.5 CBS domain-containing protein compare
MMP_RS03210 -0.7 -4.3 tRNA guanosine(15) transglycosylase TgtA compare
MMP_RS03025 -0.7 -1.9 molybdenum cofactor guanylyltransferase compare
MMP_RS03560 -0.7 -4.7 Na+/H+ antiporter NhaC family protein compare
MMP_RS00290 -0.7 -2.6 hypothetical protein compare
MMP_RS08535 -0.7 -2.6 bis-aminopropyl spermidine synthase family protein compare
MMP_RS07695 -0.6 -2.2 DUF3236 domain-containing protein compare
MMP_RS06605 -0.6 -2.9 DUF5814 domain-containing protein compare
MMP_RS02025 -0.6 -3.1 DNA-directed DNA polymerase compare
MMP_RS08290 -0.6 -2.0 DNA-binding protein Alba compare
MMP_RS06920 -0.6 -3.2 AAA family ATPase compare
MMP_RS02840 -0.6 -1.9 DUF123 domain-containing protein compare
MMP_RS05800 -0.6 -2.2 B12-binding domain-containing radical SAM protein compare
MMP_RS03225 -0.6 -1.0 acetolactate decarboxylase compare
MMP_RS00570 -0.6 -1.2 protein-L-isoaspartate O-methyltransferase compare
MMP_RS05700 -0.6 -2.6 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS07530 -0.6 -3.4 4Fe-4S binding protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments