Experiment set13S659 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete 3-nitroxypropanol 0.000416666666666667 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS03960 -4.9 -0.8 hypothetical protein compare
MMP_RS01020 -4.8 -0.8 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02280 -4.8 -0.8 DUF211 domain-containing protein compare
MMP_RS00305 -3.8 -1.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS00300 -3.7 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01325 -3.6 -2.0 dihydroneopterin aldolase family protein compare
MMP_RS06625 -3.6 -1.9 DNA primase compare
MMP_RS08820 -3.5 -5.2 hypothetical protein compare
MMP_RS03475 -3.5 -0.6 hypothetical protein compare
MMP_RS08645 -3.4 -8.5 UPF0179 family protein compare
MMP_RS07620 -3.4 -5.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS06230 -3.4 -2.5 helix-turn-helix domain-containing protein compare
MMP_RS03400 -3.3 -2.2 archease compare
MMP_RS01175 -3.3 -3.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06895 -3.2 -1.5 selenocysteine-specific translation elongation factor compare
MMP_RS04775 -3.2 -3.4 adenosylhomocysteinase compare
MMP_RS08635 -3.1 -1.2 UbiA family prenyltransferase compare
MMP_RS05920 -3.0 -0.5 50S ribosomal protein L37e compare
MMP_RS06015 -3.0 -8.3 flavodoxin family protein compare
MMP_RS08600 -3.0 -2.7 flagellar protein D compare
MMP_RS04585 -3.0 -10.3 AIR synthase related protein compare
MMP_RS08715 -3.0 -1.6 formylmethanofuran dehydrogenase subunit B compare
MMP_RS04685 -3.0 -2.7 DUF126 domain-containing protein compare
MMP_RS05845 -2.9 -1.8 tRNA-intron lyase compare
MMP_RS02240 -2.9 -2.5 methanogenesis marker 7 protein compare
MMP_RS01005 -2.8 -0.9 riboflavin synthase compare
MMP_RS00110 -2.8 -3.2 hypothetical protein compare
MMP_RS01755 -2.8 -0.9 DUF2097 domain-containing protein compare
MMP_RS07755 -2.8 -1.1 DUF555 domain-containing protein compare
MMP_RS00900 -2.8 -2.0 50S ribosomal protein L39e compare
MMP_RS07635 -2.8 -7.1 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01610 -2.8 -2.6 hypothetical protein compare
MMP_RS03025 -2.8 -4.7 molybdenum cofactor guanylyltransferase compare
MMP_RS07380 -2.7 -2.2 transcription elongation factor Spt5 compare
MMP_RS06725 -2.7 -8.5 hypothetical protein compare
MMP_RS07445 -2.6 -6.8 helix-turn-helix domain-containing protein compare
MMP_RS03600 -2.6 -1.9 triose-phosphate isomerase compare
MMP_RS04780 -2.6 -2.9 ribonuclease P compare
MMP_RS08650 -2.6 -2.9 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS01800 -2.6 -3.7 TIGR00303 family protein compare
MMP_RS03435 -2.6 -1.7 ketol-acid reductoisomerase compare
MMP_RS07525 -2.6 -5.5 4Fe-4S binding protein compare
MMP_RS06110 -2.5 -3.2 ATP-dependent protease LonB compare
MMP_RS03640 -2.5 -3.0 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06475 -2.5 -4.7 FAD-dependent oxidoreductase compare
MMP_RS00685 -2.5 -3.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS02875 -2.4 -8.9 chorismate pyruvate-lyase family protein compare
MMP_RS06020 -2.4 -3.4 archaeoflavoprotein AfpA compare
MMP_RS03315 -2.3 -0.9 ferrous iron transport protein A compare
MMP_RS02900 -2.3 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS08210 -2.3 -1.6 phosphatidylglycerophosphatase A compare
MMP_RS00695 -2.3 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS02165 -2.3 -7.7 tRNA-dihydrouridine synthase compare
MMP_RS00895 -2.3 -3.8 hypothetical protein compare
MMP_RS08790 -2.2 -2.4 translation initiation factor IF-2 subunit alpha compare
MMP_RS06400 -2.2 -1.1 4Fe-4S binding protein compare
MMP_RS08300 -2.2 -1.0 metal-sulfur cluster assembly factor compare
MMP_RS07845 -2.2 -1.4 LL-diaminopimelate aminotransferase compare
MMP_RS00115 -2.2 -9.5 radical SAM protein compare
MMP_RS06975 -2.1 -1.9 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS06285 -2.1 -1.8 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS02175 -2.1 -0.8 DUF1611 domain-containing protein compare
MMP_RS01795 -2.1 -1.2 methanogenesis marker 6 protein compare
MMP_RS06270 -2.1 -4.2 TIGR00300 family protein compare
MMP_RS03095 -2.1 -5.1 diphthine synthase compare
MMP_RS06885 -2.0 -2.2 50S ribosome-binding GTPase compare
MMP_RS07625 -2.0 -3.3 cobalt ECF transporter T component CbiQ compare
MMP_RS05430 -2.0 -3.1 TIGR00288 family NYN domain-containing protein compare
MMP_RS00315 -2.0 -4.8 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS03035 -2.0 -3.2 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS06295 -2.0 -4.4 methanogenesis marker 14 protein compare
MMP_RS00060 -2.0 -1.7 3-dehydroquinate synthase II compare
MMP_RS01985 -1.9 -4.0 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS07615 -1.8 -6.6 energy-coupling factor ABC transporter permease compare
MMP_RS05265 -1.8 -2.4 2-isopropylmalate synthase compare
MMP_RS08435 -1.8 -2.0 Era-like GTP-binding protein compare
MMP_RS01700 -1.8 -0.9 dihydroxy-acid dehydratase compare
MMP_RS07200 -1.8 -4.3 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07695 -1.8 -3.6 DUF3236 domain-containing protein compare
MMP_RS07700 -1.8 -6.5 DUF1188 domain-containing protein compare
MMP_RS00515 -1.8 -0.9 DUF655 domain-containing protein compare
MMP_RS08460 -1.7 -1.6 proteasome-activating nucleotidase compare
MMP_RS07005 -1.7 -0.4 4Fe-4S binding protein compare
MMP_RS07425 -1.7 -3.4 GTP-binding protein compare
MMP_RS01225 -1.7 -3.9 DUF5379 domain-containing protein compare
MMP_RS05245 -1.6 -7.6 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS06120 -1.6 -1.8 UPF0147 family protein compare
MMP_RS00130 -1.6 -1.0 nickel-responsive transcriptional regulator NikR compare
MMP_RS06215 -1.6 -2.5 30S ribosomal protein S6e compare
MMP_RS07600 -1.6 -1.3 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS08350 -1.6 -0.8 hypothetical protein compare
MMP_RS06340 -1.6 -4.7 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS07765 -1.6 -5.3 sodium:alanine symporter family protein compare
MMP_RS00320 -1.5 -1.5 class I SAM-dependent methyltransferase compare
MMP_RS03555 -1.5 -4.5 transcriptional regulator compare
MMP_RS01030 -1.5 -2.8 MTAP family purine nucleoside phosphorylase compare
MMP_RS01500 -1.5 -1.3 CBS domain-containing protein compare
MMP_RS00735 -1.5 -4.2 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS05875 -1.5 -2.6 hydroxyethylthiazole kinase compare
MMP_RS00730 -1.5 -3.1 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS02345 -1.5 -2.8 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01980 -1.4 -6.6 trimeric intracellular cation channel family protein compare
MMP_RS01380 -1.4 -2.3 PHP domain-containing protein compare
MMP_RS01335 -1.4 -1.2 prefoldin subunit beta compare
MMP_RS05090 -1.4 -5.1 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS08200 -1.4 -8.7 archaeosine synthase subunit alpha compare
MMP_RS00295 -1.4 -1.1 gamma carbonic anhydrase family protein compare
MMP_RS02195 -1.4 -2.3 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS04870 -1.4 -3.2 TIGR02253 family HAD-type hydrolase compare
MMP_RS05930 -1.3 -1.6 3-isopropylmalate dehydratase large subunit compare
MMP_RS05250 -1.3 -2.8 NFYB/HAP3 family transcription factor subunit compare
MMP_RS05545 -1.3 -3.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS00810 -1.3 -3.8 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS04985 -1.3 -4.1 DUF2180 family protein compare
MMP_RS01265 -1.3 -0.8 hypothetical protein compare
MMP_RS06855 -1.3 -4.7 hypothetical protein compare
MMP_RS06175 -1.3 -3.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS03520 -1.2 -1.5 YwbE family protein compare
MMP_RS06395 -1.2 -2.2 ThiF family adenylyltransferase compare
MMP_RS07580 -1.2 -1.7 DUF356 domain-containing protein compare
MMP_RS08720 -1.2 -0.9 4Fe-4S binding protein compare
MMP_RS01250 -1.2 -3.5 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS05765 -1.2 -3.8 M42 family metallopeptidase compare
MMP_RS00050 -1.2 -3.6 AarF/UbiB family protein compare
MMP_RS06930 -1.2 -6.3 MBL fold metallo-hydrolase compare
MMP_RS04195 -1.2 -1.5 flavodoxin compare
MMP_RS02340 -1.2 -1.5 DNA-directed RNA polymerase subunit E'' compare
MMP_RS03585 -1.2 -1.2 Hsp20/alpha crystallin family protein compare
MMP_RS07365 -1.2 -6.4 2-phosphoglycerate kinase compare
MMP_RS06940 -1.2 -1.6 polyprenyl diphosphate synthase compare
MMP_RS00520 -1.2 -0.9 RNA polymerase Rpb4 family protein compare
MMP_RS01665 -1.1 -2.7 DUF2111 domain-containing protein compare
MMP_RS05510 -1.1 -3.2 Rrf2 family transcriptional regulator compare
MMP_RS07605 -1.1 -1.2 diadenylate cyclase compare
MMP_RS01720 -1.1 -0.9 replication factor C large subunit compare
MMP_RS08370 -1.1 -0.4 cation:proton antiporter subunit C compare
MMP_RS04850 -1.1 -6.4 UPF0254 family protein compare
MMP_RS00725 -1.1 -3.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS01790 -1.0 -2.2 restriction endonuclease compare
MMP_RS01365 -1.0 -1.0 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS08225 -1.0 -4.0 RimK family alpha-L-glutamate ligase compare
MMP_RS08995 -1.0 -0.8 hypothetical protein compare
MMP_RS02940 -1.0 -2.5 TatD family hydrolase compare
MMP_RS06325 -1.0 -0.9 hypothetical protein compare
MMP_RS01420 -1.0 -1.1 hypothetical protein compare
MMP_RS06155 -1.0 -1.7 DUF4186 domain-containing protein compare
MMP_RS03490 -1.0 -1.1 DUF2115 domain-containing protein compare
MMP_RS02110 -1.0 -1.0 hypothetical protein compare
MMP_RS02495 -1.0 -1.2 hypothetical protein compare
MMP_RS07750 -1.0 -2.2 DUF357 domain-containing protein compare
MMP_RS02170 -1.0 -2.5 CBS domain-containing protein compare
MMP_RS06685 -1.0 -4.4 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS00040 -1.0 -2.2 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS03340 -1.0 -0.6 ABC transporter ATP-binding protein compare
MMP_RS05835 -1.0 -0.5 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS02995 -1.0 -2.5 acyl-CoA thioesterase compare
MMP_RS07875 -1.0 -1.7 hypothetical protein compare
MMP_RS08605 -0.9 -1.8 flagellar protein E compare
MMP_RS06680 -0.9 -5.2 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS00290 -0.9 -3.1 hypothetical protein compare
MMP_RS07880 -0.9 -2.6 AAA family ATPase compare
MMP_RS04980 -0.9 -5.3 DUF2193 domain-containing protein compare
MMP_RS03680 -0.9 -3.0 hypothetical protein compare
MMP_RS02680 -0.9 -2.2 ABC transporter permease compare
MMP_RS03145 -0.9 -2.1 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS02100 -0.9 -2.2 metallophosphoesterase compare
MMP_RS04890 -0.9 -0.5 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03205 -0.9 -0.7 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS01840 -0.9 -3.2 TIGR00289 family protein compare
MMP_RS04485 -0.9 -3.2 putative beta-lysine N-acetyltransferase compare
MMP_RS03445 -0.9 -0.5 methanogenesis marker 17 protein compare
MMP_RS06200 -0.9 -3.5 M24 family metallopeptidase compare
MMP_RS07775 -0.9 -3.4 alanine dehydrogenase compare
MMP_RS05070 -0.9 -3.3 4Fe-4S dicluster domain-containing protein compare
MMP_RS03140 -0.9 -2.9 hypothetical protein compare
MMP_RS08915 -0.9 -1.2 2 5-diamino-6-(ribosylamino)-4(3H)-pyrimidinone 5'-phosphate reductase compare
MMP_RS06610 -0.9 -1.7 DUF2334 domain-containing protein compare
MMP_RS01675 -0.9 -0.9 hypothetical protein compare
MMP_RS05865 -0.8 -1.7 hypothetical protein compare
MMP_RS02235 -0.8 -3.3 CBS domain-containing protein compare
MMP_RS06485 -0.8 -0.5 zinc ribbon domain-containing protein compare
MMP_RS08570 -0.8 -2.6 coenzyme F420-0:L-glutamate ligase compare
MMP_RS06430 -0.8 -1.4 6-carboxytetrahydropterin synthase QueD compare
MMP_RS06865 -0.8 -0.8 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS07575 -0.8 -1.3 RNA ligase partner protein compare
MMP_RS03800 -0.8 -1.3 hypothetical protein compare
MMP_RS02370 -0.8 -2.5 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS01105 -0.8 -2.0 hypothetical protein compare
MMP_RS01655 -0.8 -1.4 DsrE family protein compare
MMP_RS08230 -0.8 -2.2 50S ribosomal protein L11 methyltransferase compare
MMP_RS02490 -0.8 -2.1 hypothetical protein compare
MMP_RS00555 -0.8 -2.2 MFS transporter compare
MMP_RS06280 -0.8 -2.3 alpha-glucan family phosphorylase compare
MMP_RS02840 -0.8 -1.7 DUF123 domain-containing protein compare
MMP_RS04990 -0.8 -2.1 aquaporin family protein compare
MMP_RS05080 -0.8 -4.1 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS07345 -0.8 -1.6 glycine synthesis protein GlyXL (from data) compare
MMP_RS08595 -0.7 -0.5 flagellar protein C compare
MMP_RS07685 -0.7 -2.7 TIGR01212 family radical SAM protein compare
MMP_RS08195 -0.7 -2.4 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in stress experiments

For stress 3-nitroxypropanol across organisms