Experiment set13S652 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete NO 0.025 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS01610 -6.5 -2.8 hypothetical protein compare
MMP_RS01500 -5.6 -2.6 CBS domain-containing protein compare
MMP_RS03445 -5.2 -1.0 methanogenesis marker 17 protein compare
MMP_RS08460 -5.2 -3.3 proteasome-activating nucleotidase compare
MMP_RS01020 -5.2 -1.0 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS00685 -5.2 -5.1 2-phospho-L-lactate guanylyltransferase compare
MMP_RS04775 -5.1 -3.0 adenosylhomocysteinase compare
MMP_RS06895 -5.0 -1.7 selenocysteine-specific translation elongation factor compare
MMP_RS06285 -4.9 -2.6 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS01795 -4.8 -1.6 methanogenesis marker 6 protein compare
MMP_RS06110 -4.6 -4.4 ATP-dependent protease LonB compare
MMP_RS01380 -4.6 -5.6 PHP domain-containing protein compare
MMP_RS07615 -4.6 -6.5 energy-coupling factor ABC transporter permease compare
MMP_RS01225 -4.5 -6.0 DUF5379 domain-containing protein compare
MMP_RS03770 -4.5 -11.3 hydroxylamine reductase compare
MMP_RS06400 -4.5 -1.5 4Fe-4S binding protein compare
MMP_RS08820 -4.4 -6.6 hypothetical protein compare
MMP_RS03960 -4.4 -1.2 hypothetical protein compare
MMP_RS06625 -4.3 -2.2 DNA primase compare
MMP_RS00110 -4.3 -4.4 hypothetical protein compare
MMP_RS03640 -4.2 -4.1 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS06230 -4.2 -3.7 helix-turn-helix domain-containing protein compare
MMP_RS02900 -4.2 -0.8 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS02280 -4.2 -1.1 DUF211 domain-containing protein compare
MMP_RS01800 -4.1 -5.2 TIGR00303 family protein compare
MMP_RS06730 -4.1 -2.7 phosphopantothenate/pantothenate synthetase compare
MMP_RS08435 -4.1 -2.9 Era-like GTP-binding protein compare
MMP_RS04685 -4.1 -3.7 DUF126 domain-containing protein compare
MMP_RS03315 -4.1 -1.3 ferrous iron transport protein A compare
MMP_RS03765 -4.1 -5.8 CopG family ribbon-helix-helix protein compare
MMP_RS03775 -4.0 -5.7 4Fe-4S dicluster domain-containing protein compare
MMP_RS08645 -4.0 -8.2 UPF0179 family protein compare
MMP_RS06700 -4.0 -11.6 hypothetical protein compare
MMP_RS06295 -4.0 -8.0 methanogenesis marker 14 protein compare
MMP_RS07630 -4.0 -2.2 ATP-binding cassette domain-containing protein compare
MMP_RS06175 -3.9 -8.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS04870 -3.9 -6.0 TIGR02253 family HAD-type hydrolase compare
MMP_RS01005 -3.9 -1.1 riboflavin synthase compare
MMP_RS01175 -3.9 -4.0 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS03600 -3.9 -2.8 triose-phosphate isomerase compare
MMP_RS03760 -3.8 -9.5 hypothetical protein compare
MMP_RS07575 -3.8 -4.6 RNA ligase partner protein compare
MMP_RS04780 -3.8 -3.3 ribonuclease P compare
MMP_RS06020 -3.8 -6.0 archaeoflavoprotein AfpA compare
MMP_RS06345 -3.7 -11.8 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS03780 -3.7 -6.4 4Fe-4S binding protein compare
MMP_RS06685 -3.7 -11.6 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS07445 -3.6 -6.1 helix-turn-helix domain-containing protein compare
MMP_RS07600 -3.5 -2.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS02165 -3.5 -8.9 tRNA-dihydrouridine synthase compare
MMP_RS00130 -3.5 -1.6 nickel-responsive transcriptional regulator NikR compare
MMP_RS08840 -3.5 -12.8 class I SAM-dependent methyltransferase compare
MMP_RS07005 -3.5 -0.7 4Fe-4S binding protein compare
MMP_RS08590 -3.5 -6.6 flagellin compare
MMP_RS04890 -3.4 -0.9 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08600 -3.4 -4.2 flagellar protein D compare
MMP_RS01325 -3.3 -2.6 dihydroneopterin aldolase family protein compare
MMP_RS07635 -3.3 -5.5 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07380 -3.3 -2.7 transcription elongation factor Spt5 compare
MMP_RS02195 -3.3 -4.9 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS02240 -3.3 -3.1 methanogenesis marker 7 protein compare
MMP_RS02175 -3.3 -1.2 DUF1611 domain-containing protein compare
MMP_RS00895 -3.3 -4.4 hypothetical protein compare
MMP_RS06680 -3.2 -9.6 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS04710 -3.1 -2.1 hypothetical protein compare
MMP_RS08300 -3.1 -1.4 metal-sulfur cluster assembly factor compare
MMP_RS07625 -3.1 -4.1 cobalt ECF transporter T component CbiQ compare
MMP_RS00300 -3.1 -0.8 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS08605 -3.0 -7.3 flagellar protein E compare
MMP_RS01960 -3.0 -1.1 hypothetical protein compare
MMP_RS03580 -2.9 -3.4 signal recognition particle-docking protein FtsY compare
MMP_RS01665 -2.9 -3.2 DUF2111 domain-containing protein compare
MMP_RS00115 -2.9 -12.8 radical SAM protein compare
MMP_RS07820 -2.9 -6.2 UPF0104 family protein compare
MMP_RS07620 -2.9 -6.4 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS08790 -2.8 -3.1 translation initiation factor IF-2 subunit alpha compare
MMP_RS04585 -2.8 -8.3 AIR synthase related protein compare
MMP_RS05430 -2.8 -3.1 TIGR00288 family NYN domain-containing protein compare
MMP_RS03435 -2.8 -1.9 ketol-acid reductoisomerase compare
MMP_RS01755 -2.8 -1.3 DUF2097 domain-containing protein compare
MMP_RS06200 -2.7 -11.2 M24 family metallopeptidase compare
MMP_RS06270 -2.7 -6.0 TIGR00300 family protein compare
MMP_RS06975 -2.7 -3.2 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS05765 -2.6 -6.7 M42 family metallopeptidase compare
MMP_RS05515 -2.6 -6.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS05845 -2.6 -2.4 tRNA-intron lyase compare
MMP_RS03205 -2.6 -1.7 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS03700 -2.6 -6.3 sodium:proton antiporter compare
MMP_RS01250 -2.6 -8.3 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS07425 -2.6 -5.5 GTP-binding protein compare
MMP_RS02135 -2.5 -3.8 DUF5612 domain-containing protein compare
MMP_RS07365 -2.5 -11.0 2-phosphoglycerate kinase compare
MMP_RS08595 -2.5 -1.6 flagellar protein C compare
MMP_RS06600 -2.5 -1.7 class III signal peptide-containing protein compare
MMP_RS01985 -2.5 -6.4 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS00185 -2.5 -13.5 potassium channel protein compare
MMP_RS08000 -2.5 -12.8 methyl coenzyme M reductase-arginine methyltransferase Mmp10 compare
MMP_RS08745 -2.5 -6.1 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS00305 -2.4 -2.4 phosphoribosyl-ATP diphosphatase compare
MMP_RS03110 -2.4 -8.2 glycosyltransferase family 2 protein compare
MMP_RS01265 -2.4 -3.1 hypothetical protein compare
MMP_RS07735 -2.4 -0.6 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS00985 -2.4 -5.3 CDC48 family AAA ATPase compare
MMP_RS08650 -2.4 -3.3 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07200 -2.4 -6.4 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07845 -2.4 -1.7 LL-diaminopimelate aminotransferase compare
MMP_RS06925 -2.4 -2.5 ribonuclease VapC4 compare
MMP_RS06475 -2.4 -4.4 FAD-dependent oxidoreductase compare
MMP_RS03305 -2.3 -10.2 winged helix-turn-helix domain-containing protein compare
MMP_RS06105 -2.3 -8.1 hydrogenase maturation peptidase HycI compare
MMP_RS02875 -2.3 -11.8 chorismate pyruvate-lyase family protein compare
MMP_RS03035 -2.2 -4.6 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS07525 -2.2 -6.9 4Fe-4S binding protein compare
MMP_RS03555 -2.2 -6.6 transcriptional regulator compare
MMP_RS08720 -2.2 -1.6 4Fe-4S binding protein compare
MMP_RS03015 -2.2 -8.5 GTP 3' 8-cyclase MoaA compare
MMP_RS03400 -2.2 -2.3 archease compare
MMP_RS06885 -2.2 -2.6 50S ribosome-binding GTPase compare
MMP_RS06350 -2.2 -5.8 HesA/MoeB/ThiF family protein compare
MMP_RS02345 -2.1 -3.5 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS03025 -2.1 -4.0 molybdenum cofactor guanylyltransferase compare
MMP_RS06340 -2.1 -6.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS05545 -2.0 -6.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS07765 -2.0 -7.7 sodium:alanine symporter family protein compare
MMP_RS08210 -2.0 -2.1 phosphatidylglycerophosphatase A compare
MMP_RS00050 -2.0 -5.7 AarF/UbiB family protein compare
MMP_RS05865 -2.0 -4.5 hypothetical protein compare
MMP_RS06355 -2.0 -2.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS00915 -2.0 -7.2 DUF116 domain-containing protein compare
MMP_RS08635 -2.0 -2.1 UbiA family prenyltransferase compare
MMP_RS09020 -2.0 -1.5 hypothetical protein compare
MMP_RS05550 -1.9 -0.8 cation:proton antiporter compare
MMP_RS03475 -1.9 -0.7 hypothetical protein compare
MMP_RS05925 -1.9 -3.5 small nuclear ribonucleoprotein compare
MMP_RS02235 -1.9 -8.1 CBS domain-containing protein compare
MMP_RS07390 -1.8 -2.5 cell division protein FtsZ compare
MMP_RS03095 -1.8 -4.2 diphthine synthase compare
MMP_RS01195 -1.8 -1.4 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS07355 -1.8 -1.1 transcription factor S compare
MMP_RS02355 -1.8 -2.4 30S ribosomal protein S27ae compare
MMP_RS05345 -1.8 -4.8 hypothetical protein compare
MMP_RS07775 -1.7 -7.0 alanine dehydrogenase compare
MMP_RS05265 -1.7 -1.7 2-isopropylmalate synthase compare
MMP_RS05540 -1.7 -1.9 hypothetical protein compare
MMP_RS07755 -1.7 -1.0 DUF555 domain-containing protein compare
MMP_RS08195 -1.6 -4.3 hypothetical protein compare
MMP_RS05800 -1.6 -5.7 B12-binding domain-containing radical SAM protein compare
MMP_RS03250 -1.6 -3.0 MJ1244 family protein compare
MMP_RS05510 -1.6 -5.0 Rrf2 family transcriptional regulator compare
MMP_RS07750 -1.6 -4.2 DUF357 domain-containing protein compare
MMP_RS01335 -1.6 -2.4 prefoldin subunit beta compare
MMP_RS00810 -1.6 -5.1 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS02800 -1.6 -4.3 nucleotidyltransferase domain-containing protein compare
MMP_RS01980 -1.6 -9.2 trimeric intracellular cation channel family protein compare
MMP_RS07605 -1.5 -1.8 diadenylate cyclase compare
MMP_RS01840 -1.5 -5.2 TIGR00289 family protein compare
MMP_RS06725 -1.5 -6.7 hypothetical protein compare
MMP_RS01545 -1.5 -1.2 CBS domain-containing protein compare
MMP_RS05920 -1.5 -0.5 50S ribosomal protein L37e compare
MMP_RS06120 -1.5 -1.8 UPF0147 family protein compare
MMP_RS07580 -1.5 -1.9 DUF356 domain-containing protein compare
MMP_RS07330 -1.4 -10.2 membrane protein compare
MMP_RS01365 -1.4 -2.2 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS00900 -1.4 -2.0 50S ribosomal protein L39e compare
MMP_RS00515 -1.4 -0.9 DUF655 domain-containing protein compare
MMP_RS07545 -1.3 -0.9 HTH domain-containing protein compare
MMP_RS00295 -1.3 -1.9 gamma carbonic anhydrase family protein compare
MMP_RS06770 -1.3 -5.5 DHH family phosphoesterase compare
MMP_RS04875 -1.3 -3.5 energy-converting hydrogenase B subunit P compare
MMP_RS06865 -1.3 -1.1 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS05635 -1.3 -5.2 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS05445 -1.3 -5.1 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS01700 -1.3 -0.8 dihydroxy-acid dehydratase compare
MMP_RS02340 -1.3 -1.8 DNA-directed RNA polymerase subunit E'' compare
MMP_RS08200 -1.3 -8.4 archaeosine synthase subunit alpha compare
MMP_RS01495 -1.3 -5.9 TraB/GumN family protein compare
MMP_RS06630 -1.2 -0.6 UPF0058 family protein compare
MMP_RS00695 -1.2 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS05525 -1.2 -3.8 calcium/sodium antiporter compare
MMP_RS06855 -1.2 -4.5 hypothetical protein compare
MMP_RS01220 -1.2 -5.0 hypothetical protein compare
MMP_RS01100 -1.2 -1.2 ABC transporter ATP-binding protein compare
MMP_RS05245 -1.2 -6.2 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS06675 -1.2 -5.2 ADP-specific phosphofructokinase compare
MMP_RS01180 -1.2 -1.1 XTP/dITP diphosphatase compare
MMP_RS07540 -1.2 -2.6 CBS domain-containing protein compare
MMP_RS00620 -1.2 -4.2 4Fe-4S binding protein compare
MMP_RS08070 -1.1 -3.0 DUF2096 domain-containing protein compare
MMP_RS03155 -1.1 -3.7 precorrin-6A reductase compare
MMP_RS06930 -1.1 -6.9 MBL fold metallo-hydrolase compare
MMP_RS01865 -1.1 -1.3 GPR1/FUN34/YaaH family transporter compare
MMP_RS00720 -1.1 -3.9 metal-dependent hydrolase compare
MMP_RS08105 -1.1 -4.7 6-carboxyhexanoate--CoA ligase compare
MMP_RS03390 -1.1 -3.2 malate dehydrogenase compare
MMP_RS05815 -1.1 -1.6 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS06940 -1.1 -1.7 polyprenyl diphosphate synthase compare
MMP_RS00455 -1.0 -4.9 orotate phosphoribosyltransferase-like protein compare
MMP_RS02545 -1.0 -2.6 hypothetical protein compare
MMP_RS01725 -1.0 -1.9 class I SAM-dependent methyltransferase family protein compare
MMP_RS06015 -1.0 -4.5 flavodoxin family protein compare


Specific Phenotypes

For 6 genes in this experiment

For stress NO in Methanococcus maripaludis S2

For stress NO across organisms