Experiment set13S651 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS02280 -4.8 -0.8 DUF211 domain-containing protein compare
MMP_RS02900 -4.0 -0.6 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS00300 -3.8 -0.6 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01325 -3.6 -1.9 dihydroneopterin aldolase family protein compare
MMP_RS05845 -3.6 -1.9 tRNA-intron lyase compare
MMP_RS08715 -3.5 -1.5 formylmethanofuran dehydrogenase subunit B compare
MMP_RS03600 -3.4 -2.1 triose-phosphate isomerase compare
MMP_RS01755 -3.4 -0.8 DUF2097 domain-containing protein compare
MMP_RS06730 -3.4 -2.2 phosphopantothenate/pantothenate synthetase compare
MMP_RS06120 -3.4 -2.1 UPF0147 family protein compare
MMP_RS01020 -3.3 -0.9 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08460 -3.3 -3.0 proteasome-activating nucleotidase compare
MMP_RS06895 -3.1 -1.4 selenocysteine-specific translation elongation factor compare
MMP_RS05920 -3.1 -0.5 50S ribosomal protein L37e compare
MMP_RS07600 -2.9 -2.0 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS04585 -2.8 -9.8 AIR synthase related protein compare
MMP_RS03960 -2.7 -0.9 hypothetical protein compare
MMP_RS00305 -2.7 -1.9 phosphoribosyl-ATP diphosphatase compare
MMP_RS03445 -2.6 -0.9 methanogenesis marker 17 protein compare
MMP_RS00130 -2.6 -1.2 nickel-responsive transcriptional regulator NikR compare
MMP_RS08820 -2.6 -5.9 hypothetical protein compare
MMP_RS03640 -2.6 -3.6 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS04685 -2.6 -2.4 DUF126 domain-containing protein compare
MMP_RS07635 -2.5 -6.0 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01385 -2.5 -0.5 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS08300 -2.4 -1.1 metal-sulfur cluster assembly factor compare
MMP_RS03435 -2.4 -1.6 ketol-acid reductoisomerase compare
MMP_RS07005 -2.4 -0.5 4Fe-4S binding protein compare
MMP_RS01195 -2.4 -1.2 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS00895 -2.4 -3.5 hypothetical protein compare
MMP_RS03035 -2.3 -4.1 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS00110 -2.3 -3.0 hypothetical protein compare
MMP_RS01175 -2.3 -2.6 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS07625 -2.3 -3.3 cobalt ECF transporter T component CbiQ compare
MMP_RS02165 -2.2 -7.3 tRNA-dihydrouridine synthase compare
MMP_RS04090 -2.2 -2.8 hypothetical protein compare
MMP_RS07380 -2.1 -2.0 transcription elongation factor Spt5 compare
MMP_RS00320 -2.1 -1.6 class I SAM-dependent methyltransferase compare
MMP_RS03205 -2.1 -1.4 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS01795 -2.1 -1.2 methanogenesis marker 6 protein compare
MMP_RS03580 -2.1 -2.6 signal recognition particle-docking protein FtsY compare
MMP_RS08210 -2.1 -1.7 phosphatidylglycerophosphatase A compare
MMP_RS07615 -2.1 -4.7 energy-coupling factor ABC transporter permease compare
MMP_RS00685 -2.1 -4.0 2-phospho-L-lactate guanylyltransferase compare
MMP_RS00515 -2.1 -0.9 DUF655 domain-containing protein compare
MMP_RS01610 -2.1 -2.6 hypothetical protein compare
MMP_RS01500 -2.0 -1.2 CBS domain-containing protein compare
MMP_RS04775 -2.0 -2.8 adenosylhomocysteinase compare
MMP_RS07620 -2.0 -4.3 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS02875 -2.0 -10.0 chorismate pyruvate-lyase family protein compare
MMP_RS04870 -1.9 -3.8 TIGR02253 family HAD-type hydrolase compare
MMP_RS06020 -1.9 -3.7 archaeoflavoprotein AfpA compare
MMP_RS01005 -1.9 -1.0 riboflavin synthase compare
MMP_RS07525 -1.9 -6.4 4Fe-4S binding protein compare
MMP_RS08645 -1.9 -7.1 UPF0179 family protein compare
MMP_RS05430 -1.9 -4.6 TIGR00288 family NYN domain-containing protein compare
MMP_RS05265 -1.9 -2.0 2-isopropylmalate synthase compare
MMP_RS00730 -1.8 -4.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06975 -1.8 -2.2 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07425 -1.8 -5.6 GTP-binding protein compare
MMP_RS08635 -1.8 -1.5 UbiA family prenyltransferase compare
MMP_RS07445 -1.8 -6.5 helix-turn-helix domain-containing protein compare
MMP_RS06230 -1.8 -2.1 helix-turn-helix domain-containing protein compare
MMP_RS07755 -1.8 -1.0 DUF555 domain-containing protein compare
MMP_RS06725 -1.7 -6.5 hypothetical protein compare
MMP_RS01380 -1.7 -3.9 PHP domain-containing protein compare
MMP_RS00115 -1.7 -8.0 radical SAM protein compare
MMP_RS01545 -1.7 -0.9 CBS domain-containing protein compare
MMP_RS03025 -1.7 -3.8 molybdenum cofactor guanylyltransferase compare
MMP_RS00315 -1.7 -5.5 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS02170 -1.7 -3.5 CBS domain-containing protein compare
MMP_RS05865 -1.7 -3.1 hypothetical protein compare
MMP_RS07355 -1.6 -0.8 transcription factor S compare
MMP_RS03400 -1.6 -1.7 archease compare
MMP_RS00735 -1.6 -3.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS07580 -1.6 -2.2 DUF356 domain-containing protein compare
MMP_RS01800 -1.6 -2.1 TIGR00303 family protein compare
MMP_RS01700 -1.6 -0.8 dihydroxy-acid dehydratase compare
MMP_RS00295 -1.6 -1.6 gamma carbonic anhydrase family protein compare
MMP_RS06295 -1.6 -3.8 methanogenesis marker 14 protein compare
MMP_RS08790 -1.6 -1.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS05245 -1.6 -7.7 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS03315 -1.5 -0.7 ferrous iron transport protein A compare
MMP_RS07200 -1.5 -3.7 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS03555 -1.5 -5.8 transcriptional regulator compare
MMP_RS05545 -1.5 -4.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS08725 -1.5 -1.6 Ni/Fe hydrogenase subunit alpha compare
MMP_RS06175 -1.4 -4.1 winged helix-turn-helix transcriptional regulator compare
MMP_RS06855 -1.4 -6.0 hypothetical protein compare
MMP_RS08930 -1.4 -1.5 hypothetical protein compare
MMP_RS06015 -1.4 -4.6 flavodoxin family protein compare
MMP_RS08785 -1.4 -0.8 RNA-protein complex protein Nop10 compare
MMP_RS07765 -1.4 -6.4 sodium:alanine symporter family protein compare
MMP_RS08940 -1.4 -1.0 MetS family NSS transporter small subunit compare
MMP_RS06395 -1.4 -3.2 ThiF family adenylyltransferase compare
MMP_RS06630 -1.4 -0.5 UPF0058 family protein compare
MMP_RS01265 -1.4 -1.9 hypothetical protein compare
MMP_RS01720 -1.4 -1.2 replication factor C large subunit compare
MMP_RS06625 -1.4 -1.2 DNA primase compare
MMP_RS00900 -1.4 -1.5 50S ribosomal protein L39e compare
MMP_RS06270 -1.4 -2.7 TIGR00300 family protein compare
MMP_RS06680 -1.4 -5.9 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS02245 -1.3 -2.5 hypothetical protein compare
MMP_RS01980 -1.3 -7.0 trimeric intracellular cation channel family protein compare
MMP_RS05765 -1.3 -3.3 M42 family metallopeptidase compare
MMP_RS06285 -1.3 -1.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS02175 -1.3 -0.6 DUF1611 domain-containing protein compare
MMP_RS04780 -1.3 -1.6 ribonuclease P compare
MMP_RS06475 -1.3 -2.4 FAD-dependent oxidoreductase compare
MMP_RS05815 -1.3 -1.5 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS07700 -1.3 -5.0 DUF1188 domain-containing protein compare
MMP_RS06885 -1.3 -1.3 50S ribosome-binding GTPase compare
MMP_RS01250 -1.3 -4.1 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS07605 -1.3 -2.2 diadenylate cyclase compare
MMP_RS01985 -1.3 -2.9 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS08650 -1.2 -1.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS06685 -1.2 -5.7 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS08720 -1.2 -0.8 4Fe-4S binding protein compare
MMP_RS06200 -1.2 -4.3 M24 family metallopeptidase compare
MMP_RS08200 -1.2 -8.2 archaeosine synthase subunit alpha compare
MMP_RS06155 -1.2 -1.9 DUF4186 domain-containing protein compare
MMP_RS04890 -1.2 -0.5 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS01335 -1.2 -1.8 prefoldin subunit beta compare
MMP_RS00725 -1.1 -4.0 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS08435 -1.1 -0.9 Era-like GTP-binding protein compare
MMP_RS01220 -1.1 -2.7 hypothetical protein compare
MMP_RS05795 -1.1 -2.4 redox-regulated ATPase YchF compare
MMP_RS06930 -1.1 -5.8 MBL fold metallo-hydrolase compare
MMP_RS06735 -1.0 -2.5 class I SAM-dependent rRNA methyltransferase compare
MMP_RS02235 -1.0 -3.6 CBS domain-containing protein compare
MMP_RS04990 -1.0 -4.3 aquaporin family protein compare
MMP_RS04485 -1.0 -5.4 putative beta-lysine N-acetyltransferase compare
MMP_RS07630 -1.0 -0.9 ATP-binding cassette domain-containing protein compare
MMP_RS06215 -1.0 -1.3 30S ribosomal protein S6e compare
MMP_RS00695 -1.0 -0.5 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS00620 -1.0 -3.3 4Fe-4S binding protein compare
MMP_RS03095 -1.0 -2.8 diphthine synthase compare
MMP_RS01655 -1.0 -1.5 DsrE family protein compare
MMP_RS03305 -0.9 -2.1 winged helix-turn-helix domain-containing protein compare
MMP_RS07365 -0.9 -5.2 2-phosphoglycerate kinase compare
MMP_RS06340 -0.9 -4.0 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS04850 -0.9 -6.6 UPF0254 family protein compare
MMP_RS07875 -0.9 -2.0 hypothetical protein compare
MMP_RS02470 -0.9 -0.9 helix-turn-helix transcriptional regulator compare
MMP_RS07840 -0.9 -1.7 ribonuclease III compare
MMP_RS03120 -0.9 -2.2 hypothetical protein compare
MMP_RS01225 -0.9 -2.5 DUF5379 domain-containing protein compare
MMP_RS06865 -0.9 -1.3 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS06400 -0.9 -0.6 4Fe-4S binding protein compare
MMP_RS05095 -0.9 -2.6 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS08195 -0.9 -4.0 hypothetical protein compare
MMP_RS03910 -0.9 -1.5 hypothetical protein compare
MMP_RS01075 -0.8 -1.0 hypothetical protein compare
MMP_RS00050 -0.8 -2.8 AarF/UbiB family protein compare
MMP_RS07695 -0.8 -2.6 DUF3236 domain-containing protein compare
MMP_RS01540 -0.8 -0.9 DUF504 domain-containing protein compare
MMP_RS06110 -0.8 -1.9 ATP-dependent protease LonB compare
MMP_RS00810 -0.8 -2.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS03110 -0.8 -2.5 glycosyltransferase family 2 protein compare
MMP_RS01365 -0.8 -1.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS04985 -0.8 -3.4 DUF2180 family protein compare
MMP_RS07725 -0.8 -1.3 4Fe-4S dicluster domain-containing protein compare
MMP_RS03220 -0.8 -1.5 RNA 2' 3'-cyclic phosphodiesterase compare
MMP_RS07535 -0.8 -3.5 4Fe-4S binding protein compare
MMP_RS03145 -0.8 -1.9 fibrillarin-like rRNA/tRNA 2'-O-methyltransferase compare
MMP_RS08570 -0.8 -3.5 coenzyme F420-0:L-glutamate ligase compare
MMP_RS01840 -0.8 -3.1 TIGR00289 family protein compare
MMP_RS09020 -0.8 -0.6 hypothetical protein compare
MMP_RS05540 -0.8 -1.5 hypothetical protein compare
MMP_RS05875 -0.8 -1.5 hydroxyethylthiazole kinase compare
MMP_RS05515 -0.8 -3.0 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS08585 -0.8 -3.6 flagellin compare
MMP_RS02745 -0.8 -1.0 hypothetical protein compare
MMP_RS05060 -0.7 -3.1 AAA family ATPase compare
MMP_RS08105 -0.7 -2.5 6-carboxyhexanoate--CoA ligase compare
MMP_RS06290 -0.7 -2.2 DNA repair and recombination protein RadA compare
MMP_RS07880 -0.7 -3.0 AAA family ATPase compare
MMP_RS06430 -0.7 -2.0 6-carboxytetrahydropterin synthase QueD compare
MMP_RS03470 -0.7 -2.7 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS02985 -0.7 -1.3 hypothetical protein compare
MMP_RS02195 -0.7 -1.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS03890 -0.7 -1.6 DUF2540 domain-containing protein compare
MMP_RS00290 -0.7 -2.8 hypothetical protein compare
MMP_RS02025 -0.7 -3.0 DNA-directed DNA polymerase compare
MMP_RS01665 -0.7 -1.9 DUF2111 domain-containing protein compare
MMP_RS05090 -0.7 -2.8 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS05835 -0.7 -0.4 secondary thiamine-phosphate synthase enzyme YjbQ compare
MMP_RS07390 -0.7 -0.9 cell division protein FtsZ compare
MMP_RS05250 -0.7 -1.5 NFYB/HAP3 family transcription factor subunit compare
MMP_RS01030 -0.7 -2.0 MTAP family purine nucleoside phosphorylase compare
MMP_RS02495 -0.7 -0.6 hypothetical protein compare
MMP_RS02675 -0.7 -0.9 hypothetical protein compare
MMP_RS00310 -0.7 -3.3 CBS domain-containing protein compare
MMP_RS04305 -0.7 -1.1 hypothetical protein compare
MMP_RS04980 -0.7 -3.9 DUF2193 domain-containing protein compare
MMP_RS02545 -0.7 -1.6 hypothetical protein compare
MMP_RS02995 -0.7 -2.0 acyl-CoA thioesterase compare
MMP_RS08225 -0.7 -3.1 RimK family alpha-L-glutamate ligase compare
MMP_RS04500 -0.7 -4.3 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS03520 -0.7 -0.9 YwbE family protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments