Experiment set13S635 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete sodium nitrite 0.416666666666667 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS03445 -3.7 -0.7 methanogenesis marker 17 protein compare
MMP_RS07635 -3.7 -6.2 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS06120 -3.6 -1.8 UPF0147 family protein compare
MMP_RS00520 -3.6 -1.3 RNA polymerase Rpb4 family protein compare
MMP_RS08790 -3.5 -2.0 translation initiation factor IF-2 subunit alpha compare
MMP_RS07630 -3.3 -1.2 ATP-binding cassette domain-containing protein compare
MMP_RS01755 -3.2 -0.6 DUF2097 domain-containing protein compare
MMP_RS07005 -3.1 -0.4 4Fe-4S binding protein compare
MMP_RS00305 -2.9 -1.1 phosphoribosyl-ATP diphosphatase compare
MMP_RS06895 -2.9 -1.0 selenocysteine-specific translation elongation factor compare
MMP_RS03600 -2.8 -1.5 triose-phosphate isomerase compare
MMP_RS07615 -2.8 -6.6 energy-coupling factor ABC transporter permease compare
MMP_RS03205 -2.8 -1.1 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS00695 -2.7 -0.5 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS02900 -2.7 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS01795 -2.7 -1.0 methanogenesis marker 6 protein compare
MMP_RS08645 -2.7 -6.5 UPF0179 family protein compare
MMP_RS06730 -2.6 -1.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS01700 -2.6 -0.7 dihydroxy-acid dehydratase compare
MMP_RS04685 -2.5 -2.2 DUF126 domain-containing protein compare
MMP_RS04585 -2.5 -10.7 AIR synthase related protein compare
MMP_RS06315 -2.5 -0.6 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS07730 -2.5 -1.3 pyruvate synthase subunit beta compare
MMP_RS08300 -2.4 -0.7 metal-sulfur cluster assembly factor compare
MMP_RS08675 -2.4 -2.1 class III signal peptide-containing protein compare
MMP_RS01800 -2.4 -2.9 TIGR00303 family protein compare
MMP_RS01500 -2.3 -1.5 CBS domain-containing protein compare
MMP_RS03035 -2.3 -3.0 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS08715 -2.3 -1.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS02110 -2.3 -1.7 hypothetical protein compare
MMP_RS02240 -2.3 -1.9 methanogenesis marker 7 protein compare
MMP_RS01335 -2.3 -1.7 prefoldin subunit beta compare
MMP_RS04775 -2.2 -2.4 adenosylhomocysteinase compare
MMP_RS03025 -2.2 -3.7 molybdenum cofactor guanylyltransferase compare
MMP_RS09020 -2.2 -0.9 hypothetical protein compare
MMP_RS07620 -2.1 -3.7 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS03580 -2.0 -2.3 signal recognition particle-docking protein FtsY compare
MMP_RS05550 -2.0 -0.4 cation:proton antiporter compare
MMP_RS03960 -2.0 -0.6 hypothetical protein compare
MMP_RS01960 -2.0 -0.6 hypothetical protein compare
MMP_RS02235 -2.0 -8.1 CBS domain-containing protein compare
MMP_RS08820 -1.9 -4.2 hypothetical protein compare
MMP_RS06625 -1.9 -1.2 DNA primase compare
MMP_RS03640 -1.9 -2.4 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS00110 -1.9 -2.1 hypothetical protein compare
MMP_RS06885 -1.9 -1.5 50S ribosome-binding GTPase compare
MMP_RS02875 -1.9 -6.2 chorismate pyruvate-lyase family protein compare
MMP_RS00685 -1.9 -2.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS07545 -1.9 -0.6 HTH domain-containing protein compare
MMP_RS01085 -1.9 -1.2 hypothetical protein compare
MMP_RS07390 -1.9 -1.6 cell division protein FtsZ compare
MMP_RS07765 -1.8 -6.7 sodium:alanine symporter family protein compare
MMP_RS02280 -1.8 -0.6 DUF211 domain-containing protein compare
MMP_RS07600 -1.8 -1.5 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS06020 -1.8 -3.4 archaeoflavoprotein AfpA compare
MMP_RS04780 -1.8 -1.9 ribonuclease P compare
MMP_RS02930 -1.8 -2.7 class I SAM-dependent methyltransferase compare
MMP_RS05020 -1.8 -2.4 hypothetical protein compare
MMP_RS06725 -1.7 -6.4 hypothetical protein compare
MMP_RS05430 -1.7 -3.8 TIGR00288 family NYN domain-containing protein compare
MMP_RS01100 -1.7 -0.9 ABC transporter ATP-binding protein compare
MMP_RS06015 -1.7 -4.8 flavodoxin family protein compare
MMP_RS03315 -1.7 -0.6 ferrous iron transport protein A compare
MMP_RS07380 -1.7 -1.3 transcription elongation factor Spt5 compare
MMP_RS08440 -1.7 -1.7 cell division protein SepF compare
MMP_RS00130 -1.7 -0.7 nickel-responsive transcriptional regulator NikR compare
MMP_RS07425 -1.7 -3.7 GTP-binding protein compare
MMP_RS06475 -1.7 -2.7 FAD-dependent oxidoreductase compare
MMP_RS01610 -1.7 -1.8 hypothetical protein compare
MMP_RS07115 -1.7 -4.4 MBL fold metallo-hydrolase compare
MMP_RS02345 -1.6 -2.3 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS01020 -1.6 -0.5 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS06395 -1.6 -2.5 ThiF family adenylyltransferase compare
MMP_RS07445 -1.6 -4.9 helix-turn-helix domain-containing protein compare
MMP_RS02165 -1.6 -5.9 tRNA-dihydrouridine synthase compare
MMP_RS05875 -1.5 -2.7 hydroxyethylthiazole kinase compare
MMP_RS07625 -1.5 -1.8 cobalt ECF transporter T component CbiQ compare
MMP_RS01175 -1.5 -1.5 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02175 -1.5 -0.5 DUF1611 domain-containing protein compare
MMP_RS08650 -1.5 -2.0 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07200 -1.5 -3.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS00730 -1.5 -3.6 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS07525 -1.5 -4.8 4Fe-4S binding protein compare
MMP_RS08435 -1.5 -1.2 Era-like GTP-binding protein compare
MMP_RS07755 -1.5 -0.7 DUF555 domain-containing protein compare
MMP_RS06925 -1.5 -1.2 ribonuclease VapC4 compare
MMP_RS07365 -1.4 -7.1 2-phosphoglycerate kinase compare
MMP_RS03450 -1.4 -1.4 glycine synthesis protein GlyXS (from data) compare
MMP_RS01365 -1.4 -1.6 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS07695 -1.4 -3.2 DUF3236 domain-containing protein compare
MMP_RS06400 -1.4 -0.6 4Fe-4S binding protein compare
MMP_RS06295 -1.4 -3.1 methanogenesis marker 14 protein compare
MMP_RS01290 -1.4 -6.2 class III signal peptide-containing protein compare
MMP_RS07735 -1.3 -0.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS00895 -1.3 -2.1 hypothetical protein compare
MMP_RS06855 -1.3 -4.1 hypothetical protein compare
MMP_RS01275 -1.3 -2.3 class III signal peptide-containing protein compare
MMP_RS02340 -1.3 -1.4 DNA-directed RNA polymerase subunit E'' compare
MMP_RS03305 -1.3 -3.8 winged helix-turn-helix domain-containing protein compare
MMP_RS00245 -1.3 -9.0 type II secretion system F family protein compare
MMP_RS01225 -1.3 -2.8 DUF5379 domain-containing protein compare
MMP_RS00735 -1.3 -1.9 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS08580 -1.3 -2.6 flagellin compare
MMP_RS06200 -1.3 -4.7 M24 family metallopeptidase compare
MMP_RS01195 -1.3 -0.7 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS05090 -1.3 -4.4 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS05555 -1.3 -0.8 DUF4040 domain-containing protein compare
MMP_RS00315 -1.3 -3.1 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS00850 -1.2 -2.7 TIGR01177 family methyltransferase compare
MMP_RS09055 -1.2 -0.5 CAP domain-containing protein compare
MMP_RS01295 -1.2 -6.0 hypothetical protein compare
MMP_RS01220 -1.2 -3.0 hypothetical protein compare
MMP_RS04870 -1.2 -2.6 TIGR02253 family HAD-type hydrolase compare
MMP_RS05245 -1.2 -5.1 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS00725 -1.2 -2.9 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS05815 -1.2 -1.0 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS00320 -1.2 -0.8 class I SAM-dependent methyltransferase compare
MMP_RS01265 -1.2 -1.6 hypothetical protein compare
MMP_RS03555 -1.2 -3.3 transcriptional regulator compare
MMP_RS02490 -1.2 -2.0 hypothetical protein compare
MMP_RS00240 -1.2 -6.2 type II secretion system F family protein compare
MMP_RS07700 -1.2 -4.2 DUF1188 domain-containing protein compare
MMP_RS07775 -1.2 -2.5 alanine dehydrogenase compare
MMP_RS05095 -1.2 -2.5 CO dehydrogenase/acetyl-CoA synthase complex subunit epsilon compare
MMP_RS06285 -1.2 -0.9 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06035 -1.1 -4.6 glycosyltransferase family 2 protein compare
MMP_RS05635 -1.1 -4.1 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS01980 -1.1 -6.8 trimeric intracellular cation channel family protein compare
MMP_RS03550 -1.1 -1.2 DUF2124 domain-containing protein compare
MMP_RS01270 -1.1 -6.3 prepilin peptidase compare
MMP_RS02500 -1.1 -3.0 minichromosome maintenance protein MCM compare
MMP_RS07330 -1.1 -7.2 membrane protein compare
MMP_RS00140 -1.1 -2.7 DUF192 domain-containing protein compare
MMP_RS05085 -1.1 -4.5 AAA family ATPase compare
MMP_RS07880 -1.1 -3.7 AAA family ATPase compare
MMP_RS04985 -1.1 -2.2 DUF2180 family protein compare
MMP_RS06970 -1.1 -3.6 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS08785 -1.1 -0.5 RNA-protein complex protein Nop10 compare
MMP_RS07605 -1.1 -1.3 diadenylate cyclase compare
MMP_RS01305 -1.1 -6.3 hypothetical protein compare
MMP_RS02195 -1.1 -1.7 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS01285 -1.1 -3.4 hypothetical protein compare
MMP_RS08460 -1.0 -1.2 proteasome-activating nucleotidase compare
MMP_RS00115 -1.0 -4.3 radical SAM protein compare
MMP_RS02425 -1.0 -2.3 hypothetical protein compare
MMP_RS07580 -1.0 -1.2 DUF356 domain-containing protein compare
MMP_RS01280 -1.0 -5.3 DUF515 domain-containing protein compare
MMP_RS08570 -1.0 -3.6 coenzyme F420-0:L-glutamate ligase compare
MMP_RS08600 -1.0 -1.4 flagellar protein D compare
MMP_RS04710 -1.0 -0.7 hypothetical protein compare
MMP_RS03680 -1.0 -2.5 hypothetical protein compare
MMP_RS05580 -1.0 -5.7 glycosyltransferase compare
MMP_RS02595 -1.0 -0.6 putative zinc-binding protein compare
MMP_RS00250 -1.0 -5.0 Flp pilus assembly complex ATPase component TadA compare
MMP_RS03110 -1.0 -1.9 glycosyltransferase family 2 protein compare
MMP_RS05075 -1.0 -5.7 acetyl-CoA decarbonylase/synthase complex subunit gamma compare
MMP_RS02170 -1.0 -1.7 CBS domain-containing protein compare
MMP_RS00705 -1.0 -0.8 hypothetical protein compare
MMP_RS05100 -1.0 -6.4 CO dehydrogenase/acetyl-CoA synthase complex subunit alpha compare
MMP_RS05545 -0.9 -2.1 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS08290 -0.9 -2.5 DNA-binding protein Alba compare
MMP_RS05365 -0.9 -1.0 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS01790 -0.9 -2.3 restriction endonuclease compare
MMP_RS04990 -0.9 -2.7 aquaporin family protein compare
MMP_RS08670 -0.9 -2.9 metallophosphoesterase compare
MMP_RS08855 -0.9 -2.2 hypothetical protein compare
MMP_RS08940 -0.9 -0.6 MetS family NSS transporter small subunit compare
MMP_RS00570 -0.9 -0.8 protein-L-isoaspartate O-methyltransferase compare
MMP_RS03435 -0.9 -0.6 ketol-acid reductoisomerase compare
MMP_RS06975 -0.9 -1.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS06930 -0.9 -4.6 MBL fold metallo-hydrolase compare
MMP_RS02025 -0.9 -3.1 DNA-directed DNA polymerase compare
MMP_RS00185 -0.9 -3.7 potassium channel protein compare
MMP_RS01315 -0.9 -6.6 DUF2341 domain-containing protein compare
MMP_RS08860 -0.9 -1.8 MinD/ParA family protein compare
MMP_RS08635 -0.9 -0.7 UbiA family prenyltransferase compare
MMP_RS02940 -0.9 -1.8 TatD family hydrolase compare
MMP_RS03070 -0.9 -2.9 AzlD domain-containing protein compare
MMP_RS01655 -0.9 -1.6 DsrE family protein compare
MMP_RS00300 -0.9 -0.2 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS01575 -0.9 -1.9 aldolase compare
MMP_RS05510 -0.9 -2.6 Rrf2 family transcriptional regulator compare
MMP_RS01445 -0.9 -2.4 hypothetical protein compare
MMP_RS02370 -0.9 -2.0 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS05865 -0.9 -1.3 hypothetical protein compare
MMP_RS05080 -0.9 -4.4 acetyl-CoA decarbonylase/synthase complex subunit delta compare
MMP_RS06900 -0.9 -1.3 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS02995 -0.9 -2.0 acyl-CoA thioesterase compare
MMP_RS08195 -0.9 -2.8 hypothetical protein compare
MMP_RS04980 -0.8 -3.6 DUF2193 domain-containing protein compare
MMP_RS05265 -0.8 -0.9 2-isopropylmalate synthase compare
MMP_RS02390 -0.8 -2.1 NifB/NifX family molybdenum-iron cluster-binding protein compare
MMP_RS05765 -0.8 -1.7 M42 family metallopeptidase compare
MMP_RS04265 -0.8 -1.4 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS06340 -0.8 -2.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS05060 -0.8 -4.1 AAA family ATPase compare
MMP_RS03470 -0.8 -3.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS03130 -0.8 -1.8 hypothetical protein compare
MMP_RS03625 -0.8 -2.7 cell wall-binding protein compare
MMP_RS01785 -0.8 -2.4 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For stress Sodium nitrite in Methanococcus maripaludis S2

For stress Sodium nitrite across organisms