Experiment set13S632 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete Sodium selenate 31.25 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS06355 -3.3 -4.2 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS03110 -3.0 -9.6 glycosyltransferase family 2 protein compare
MMP_RS03015 -3.0 -12.6 GTP 3' 8-cyclase MoaA compare
MMP_RS06350 -3.0 -8.1 HesA/MoeB/ThiF family protein compare
MMP_RS05515 -2.9 -10.6 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS08635 -2.9 -2.7 UbiA family prenyltransferase compare
MMP_RS08720 -2.8 -2.4 4Fe-4S binding protein compare
MMP_RS03315 -2.8 -1.7 ferrous iron transport protein A compare
MMP_RS02900 -2.7 -1.2 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS04710 -2.6 -2.8 hypothetical protein compare
MMP_RS08460 -2.6 -3.1 proteasome-activating nucleotidase compare
MMP_RS07005 -2.5 -0.9 4Fe-4S binding protein compare
MMP_RS02230 -2.5 -14.4 sodium-dependent transporter compare
MMP_RS08715 -2.5 -2.7 formylmethanofuran dehydrogenase subunit B compare
MMP_RS08745 -2.4 -8.4 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS07635 -2.3 -7.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS07390 -2.2 -3.2 cell division protein FtsZ compare
MMP_RS05430 -2.2 -4.2 TIGR00288 family NYN domain-containing protein compare
MMP_RS06285 -2.2 -3.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS06295 -2.1 -6.7 methanogenesis marker 14 protein compare
MMP_RS07525 -2.1 -6.3 4Fe-4S binding protein compare
MMP_RS06400 -2.1 -1.5 4Fe-4S binding protein compare
MMP_RS01960 -2.0 -1.5 hypothetical protein compare
MMP_RS04585 -2.0 -11.0 AIR synthase related protein compare
MMP_RS01795 -2.0 -2.1 methanogenesis marker 6 protein compare
MMP_RS07735 -1.9 -1.0 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS01265 -1.9 -3.7 hypothetical protein compare
MMP_RS02240 -1.9 -3.7 methanogenesis marker 7 protein compare
MMP_RS06270 -1.8 -6.2 TIGR00300 family protein compare
MMP_RS06680 -1.8 -10.2 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS02145 -1.8 -7.9 winged helix-turn-helix transcriptional regulator compare
MMP_RS00130 -1.8 -1.9 nickel-responsive transcriptional regulator NikR compare
MMP_RS08650 -1.8 -4.1 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS00685 -1.7 -4.3 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01020 -1.7 -1.4 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS08210 -1.7 -3.0 phosphatidylglycerophosphatase A compare
MMP_RS03960 -1.7 -1.4 hypothetical protein compare
MMP_RS01500 -1.7 -2.5 CBS domain-containing protein compare
MMP_RS06120 -1.7 -2.5 UPF0147 family protein compare
MMP_RS06700 -1.7 -10.2 hypothetical protein compare
MMP_RS00120 -1.7 -6.2 LysR family transcriptional regulator compare
MMP_RS01800 -1.7 -4.1 TIGR00303 family protein compare
MMP_RS02800 -1.7 -7.1 nucleotidyltransferase domain-containing protein compare
MMP_RS07600 -1.6 -2.7 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS02280 -1.6 -1.3 DUF211 domain-containing protein compare
MMP_RS01220 -1.6 -7.1 hypothetical protein compare
MMP_RS06685 -1.6 -9.3 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS00515 -1.6 -1.1 DUF655 domain-containing protein compare
MMP_RS06895 -1.6 -1.5 selenocysteine-specific translation elongation factor compare
MMP_RS06630 -1.6 -0.9 UPF0058 family protein compare
MMP_RS03640 -1.6 -3.4 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS07200 -1.6 -6.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS07445 -1.6 -6.7 helix-turn-helix domain-containing protein compare
MMP_RS03445 -1.5 -1.3 methanogenesis marker 17 protein compare
MMP_RS03025 -1.5 -4.2 molybdenum cofactor guanylyltransferase compare
MMP_RS04685 -1.5 -3.2 DUF126 domain-containing protein compare
MMP_RS01385 -1.5 -0.8 imidazole glycerol phosphate synthase subunit HisH compare
MMP_RS06110 -1.5 -3.6 ATP-dependent protease LonB compare
MMP_RS03210 -1.5 -11.3 tRNA guanosine(15) transglycosylase TgtA compare
MMP_RS07090 -1.5 -7.8 tRNA (adenine-N1)-methyltransferase compare
MMP_RS02875 -1.4 -8.9 chorismate pyruvate-lyase family protein compare
MMP_RS05445 -1.4 -8.6 CoB--CoM heterodisulfide reductase subunit B compare
MMP_RS06090 -1.4 -8.6 iron ABC transporter permease compare
MMP_RS00315 -1.4 -6.3 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS06095 -1.4 -8.6 ABC transporter ATP-binding protein compare
MMP_RS06720 -1.4 -5.4 response regulator transcription factor compare
MMP_RS00305 -1.4 -1.8 phosphoribosyl-ATP diphosphatase compare
MMP_RS01325 -1.4 -2.4 dihydroneopterin aldolase family protein compare
MMP_RS03580 -1.4 -3.6 signal recognition particle-docking protein FtsY compare
MMP_RS08195 -1.3 -6.2 hypothetical protein compare
MMP_RS06230 -1.3 -3.1 helix-turn-helix domain-containing protein compare
MMP_RS00520 -1.3 -2.1 RNA polymerase Rpb4 family protein compare
MMP_RS06715 -1.3 -8.9 cache domain-containing protein compare
MMP_RS01175 -1.3 -3.1 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS08070 -1.3 -4.2 DUF2096 domain-containing protein compare
MMP_RS07765 -1.2 -6.3 sodium:alanine symporter family protein compare
MMP_RS07335 -1.1 -5.2 tRNA (cytidine(56)-2'-O)-methyltransferase compare
MMP_RS06730 -1.1 -1.8 phosphopantothenate/pantothenate synthetase compare
MMP_RS04780 -1.1 -2.6 ribonuclease P compare
MMP_RS06865 -1.1 -1.1 HypC/HybG/HupF family hydrogenase formation chaperone compare
MMP_RS04890 -1.1 -1.0 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS08300 -1.1 -0.9 metal-sulfur cluster assembly factor compare
MMP_RS01365 -1.1 -3.4 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS06175 -1.1 -6.4 winged helix-turn-helix transcriptional regulator compare
MMP_RS07620 -1.1 -3.0 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS05125 -1.1 -6.5 D-aminoacyl-tRNA deacylase compare
MMP_RS07615 -1.1 -4.3 energy-coupling factor ABC transporter permease compare
MMP_RS01005 -1.1 -1.1 riboflavin synthase compare
MMP_RS00725 -1.1 -7.3 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS06345 -1.0 -5.1 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS07380 -1.0 -1.5 transcription elongation factor Spt5 compare
MMP_RS05550 -1.0 -0.7 cation:proton antiporter compare
MMP_RS06975 -1.0 -1.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS00900 -1.0 -2.3 50S ribosomal protein L39e compare
MMP_RS01720 -1.0 -1.3 replication factor C large subunit compare
MMP_RS02340 -1.0 -2.2 DNA-directed RNA polymerase subunit E'' compare
MMP_RS02165 -1.0 -5.1 tRNA-dihydrouridine synthase compare
MMP_RS08200 -1.0 -8.1 archaeosine synthase subunit alpha compare
MMP_RS07695 -1.0 -4.0 DUF3236 domain-containing protein compare
MMP_RS06625 -1.0 -1.5 DNA primase compare
MMP_RS03600 -1.0 -1.7 triose-phosphate isomerase compare
MMP_RS01380 -1.0 -3.2 PHP domain-containing protein compare
MMP_RS07365 -1.0 -6.0 2-phosphoglycerate kinase compare
MMP_RS00530 -1.0 -5.3 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS02355 -0.9 -1.4 30S ribosomal protein S27ae compare
MMP_RS06600 -0.9 -1.3 class III signal peptide-containing protein compare
MMP_RS00320 -0.9 -1.5 class I SAM-dependent methyltransferase compare
MMP_RS00730 -0.9 -4.6 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS05450 -0.9 -2.6 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS01545 -0.9 -1.1 CBS domain-containing protein compare
MMP_RS07625 -0.9 -2.6 cobalt ECF transporter T component CbiQ compare
MMP_RS07875 -0.9 -3.5 hypothetical protein compare
MMP_RS01755 -0.9 -0.8 DUF2097 domain-containing protein compare
MMP_RS01610 -0.9 -1.4 hypothetical protein compare
MMP_RS03450 -0.9 -2.5 glycine synthesis protein GlyXS (from data) compare
MMP_RS08790 -0.9 -1.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS03550 -0.9 -1.9 DUF2124 domain-containing protein compare
MMP_RS02345 -0.8 -2.5 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS03400 -0.8 -1.4 archease compare
MMP_RS00310 -0.8 -4.1 CBS domain-containing protein compare
MMP_RS06020 -0.8 -1.9 archaeoflavoprotein AfpA compare
MMP_RS09055 -0.8 -0.9 CAP domain-containing protein compare
MMP_RS07700 -0.8 -4.3 DUF1188 domain-containing protein compare
MMP_RS07605 -0.8 -1.6 diadenylate cyclase compare
MMP_RS02235 -0.8 -5.3 CBS domain-containing protein compare
MMP_RS05525 -0.8 -4.7 calcium/sodium antiporter compare
MMP_RS07420 -0.8 -2.4 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06290 -0.8 -2.6 DNA repair and recombination protein RadA compare
MMP_RS04850 -0.8 -6.7 UPF0254 family protein compare
MMP_RS05765 -0.8 -4.1 M42 family metallopeptidase compare
MMP_RS03300 -0.8 -0.6 TOBE domain-containing protein compare
MMP_RS07755 -0.8 -0.8 DUF555 domain-containing protein compare
MMP_RS06170 -0.8 -5.0 ABC transporter ATP-binding protein compare
MMP_RS01225 -0.7 -3.4 DUF5379 domain-containing protein compare
MMP_RS07775 -0.7 -2.4 alanine dehydrogenase compare
MMP_RS02100 -0.7 -2.3 metallophosphoesterase compare
MMP_RS03555 -0.7 -3.4 transcriptional regulator compare
MMP_RS05285 -0.7 -3.2 MMPL family transporter compare
MMP_RS08440 -0.7 -2.1 cell division protein SepF compare
MMP_RS03700 -0.7 -3.1 sodium:proton antiporter compare
MMP_RS00040 -0.7 -3.3 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS03685 -0.7 -4.2 Mrp/NBP35 family ATP-binding protein compare
MMP_RS05485 -0.7 -4.8 cysteine--tRNA ligase compare
MMP_RS06725 -0.7 -4.2 hypothetical protein compare
MMP_RS07550 -0.7 -5.3 L-serine ammonia-lyase iron-sulfur-dependent subunit alpha compare
MMP_RS04165 -0.7 -1.6 TetR/AcrR family transcriptional regulator compare
MMP_RS06105 -0.7 -3.5 hydrogenase maturation peptidase HycI compare
MMP_RS01085 -0.7 -1.5 hypothetical protein compare
MMP_RS06395 -0.7 -2.3 ThiF family adenylyltransferase compare
MMP_RS00695 -0.7 -0.6 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS00735 -0.7 -2.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS05510 -0.7 -3.0 Rrf2 family transcriptional regulator compare
MMP_RS05255 -0.7 -4.9 CBS domain-containing protein compare
MMP_RS06555 -0.7 -1.3 cupin domain-containing protein compare
MMP_RS07710 -0.7 -3.0 cell division protein FtsZ compare
MMP_RS06900 -0.7 -1.4 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03895 -0.7 -1.9 hypothetical protein compare
MMP_RS08320 -0.6 -2.8 molybdopterin molybdotransferase MoeA compare
MMP_RS05865 -0.6 -2.5 hypothetical protein compare
MMP_RS05875 -0.6 -1.4 hydroxyethylthiazole kinase compare
MMP_RS08645 -0.6 -3.7 UPF0179 family protein compare
MMP_RS07685 -0.6 -3.3 TIGR01212 family radical SAM protein compare
MMP_RS05540 -0.6 -1.5 hypothetical protein compare
MMP_RS00985 -0.6 -1.9 CDC48 family AAA ATPase compare
MMP_RS01665 -0.6 -2.0 DUF2111 domain-containing protein compare
MMP_RS08435 -0.6 -1.4 Era-like GTP-binding protein compare
MMP_RS07630 -0.6 -1.0 ATP-binding cassette domain-containing protein compare
MMP_RS06940 -0.6 -1.5 polyprenyl diphosphate synthase compare
MMP_RS03390 -0.6 -3.3 malate dehydrogenase compare
MMP_RS04090 -0.6 -1.4 hypothetical protein compare
MMP_RS00720 -0.6 -2.4 metal-dependent hydrolase compare
MMP_RS01180 -0.6 -1.3 XTP/dITP diphosphatase compare
MMP_RS07860 -0.6 -0.5 hypothetical protein compare
MMP_RS05280 -0.6 -3.7 COG1361 S-layer family protein compare
MMP_RS09020 -0.6 -0.8 hypothetical protein compare
MMP_RS01540 -0.6 -2.0 DUF504 domain-containing protein compare
MMP_RS05265 -0.6 -1.2 2-isopropylmalate synthase compare
MMP_RS05830 -0.6 -1.9 peptidyl-prolyl cis-trans isomerase compare
MMP_RS02175 -0.6 -0.6 DUF1611 domain-containing protein compare
MMP_RS01100 -0.6 -1.1 ABC transporter ATP-binding protein compare
MMP_RS08600 -0.6 -1.3 flagellar protein D compare
MMP_RS00750 -0.6 -1.0 fumarate hydratase compare
MMP_RS06155 -0.6 -2.1 DUF4186 domain-containing protein compare
MMP_RS03785 -0.6 -2.3 cupin domain-containing protein compare
MMP_RS06705 -0.5 -2.2 formate/nitrite transporter family protein compare
MMP_RS05295 -0.5 -3.7 minichromosome maintenance protein MCM compare
MMP_RS03535 -0.5 -1.0 helix-turn-helix transcriptional regulator compare
MMP_RS07580 -0.5 -1.3 DUF356 domain-containing protein compare
MMP_RS02780 -0.5 -3.7 hypothetical protein compare
MMP_RS06165 -0.5 -3.5 ABC transporter permease compare
MMP_RS00825 -0.5 -1.7 fumarylacetoacetate hydrolase family protein compare
MMP_RS08400 -0.5 -2.5 MJ0307 family thioredoxin compare
MMP_RS01775 -0.5 -1.2 TIGR00297 family protein compare
MMP_RS01575 -0.5 -2.7 aldolase compare
MMP_RS06885 -0.5 -1.0 50S ribosome-binding GTPase compare
MMP_RS01965 -0.5 -1.5 DUF1616 domain-containing protein compare
MMP_RS01030 -0.5 -2.1 MTAP family purine nucleoside phosphorylase compare
MMP_RS07845 -0.5 -0.7 LL-diaminopimelate aminotransferase compare
MMP_RS00335 -0.5 -1.2 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS06070 -0.5 -2.9 iron ABC transporter substrate-binding protein compare


Specific Phenotypes

For 4 genes in this experiment

For stress Sodium selenate in Methanococcus maripaludis S2

For stress Sodium selenate across organisms