Experiment set13S580 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete no stress control

200 most important genes:

  gene name fitness t score description  
MMP_RS03960 -5.2 -1.1 hypothetical protein compare
MMP_RS07380 -4.6 -2.9 transcription elongation factor Spt5 compare
MMP_RS07600 -4.2 -2.8 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS02900 -4.2 -0.9 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS03315 -4.0 -1.4 ferrous iron transport protein A compare
MMP_RS01700 -3.7 -1.1 dihydroxy-acid dehydratase compare
MMP_RS07635 -3.7 -10.4 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS08720 -3.4 -1.9 4Fe-4S binding protein compare
MMP_RS09020 -3.3 -1.9 hypothetical protein compare
MMP_RS02280 -3.1 -1.3 DUF211 domain-containing protein compare
MMP_RS04685 -3.0 -3.9 DUF126 domain-containing protein compare
MMP_RS07605 -2.9 -4.2 diadenylate cyclase compare
MMP_RS06230 -2.9 -2.8 helix-turn-helix domain-containing protein compare
MMP_RS01175 -2.7 -3.7 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS06685 -2.7 -9.6 formate dehydrogenase H subunit alpha selenocysteine-containing compare
MMP_RS05515 -2.6 -7.8 cyclic pyranopterin monophosphate synthase MoaC compare
MMP_RS03640 -2.6 -4.7 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS08435 -2.5 -2.6 Era-like GTP-binding protein compare
MMP_RS06120 -2.5 -2.9 UPF0147 family protein compare
MMP_RS01265 -2.5 -4.3 hypothetical protein compare
MMP_RS00515 -2.5 -1.2 DUF655 domain-containing protein compare
MMP_RS06355 -2.5 -2.9 molybdenum cofactor biosynthesis protein MoaE compare
MMP_RS00300 -2.4 -0.8 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04780 -2.4 -3.6 ribonuclease P compare
MMP_RS02195 -2.4 -3.5 tRNA (N(6)-L-threonylcarbamoyladenosine(37)-C(2))-methylthiotransferase compare
MMP_RS06400 -2.4 -1.3 4Fe-4S binding protein compare
MMP_RS06295 -2.4 -6.2 methanogenesis marker 14 protein compare
MMP_RS06680 -2.4 -8.7 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS04585 -2.3 -11.5 AIR synthase related protein compare
MMP_RS06350 -2.3 -5.6 HesA/MoeB/ThiF family protein compare
MMP_RS02875 -2.3 -9.2 chorismate pyruvate-lyase family protein compare
MMP_RS08645 -2.3 -8.2 UPF0179 family protein compare
MMP_RS06975 -2.2 -3.0 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS07425 -2.2 -8.5 GTP-binding protein compare
MMP_RS07620 -2.1 -5.2 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS08210 -2.1 -1.9 phosphatidylglycerophosphatase A compare
MMP_RS08790 -2.1 -3.4 translation initiation factor IF-2 subunit alpha compare
MMP_RS07625 -2.1 -4.4 cobalt ECF transporter T component CbiQ compare
MMP_RS05550 -2.1 -0.8 cation:proton antiporter compare
MMP_RS01755 -2.1 -1.3 DUF2097 domain-containing protein compare
MMP_RS01800 -2.1 -4.4 TIGR00303 family protein compare
MMP_RS01380 -2.0 -4.9 PHP domain-containing protein compare
MMP_RS06475 -2.0 -4.7 FAD-dependent oxidoreductase compare
MMP_RS06885 -2.0 -2.9 50S ribosome-binding GTPase compare
MMP_RS07385 -2.0 -3.6 protein translocase SEC61 complex subunit gamma compare
MMP_RS01020 -2.0 -1.2 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS02175 -2.0 -1.1 DUF1611 domain-containing protein compare
MMP_RS08635 -1.9 -2.1 UbiA family prenyltransferase compare
MMP_RS00895 -1.9 -4.4 hypothetical protein compare
MMP_RS00130 -1.9 -1.5 nickel-responsive transcriptional regulator NikR compare
MMP_RS07445 -1.9 -7.5 helix-turn-helix domain-containing protein compare
MMP_RS03015 -1.9 -7.3 GTP 3' 8-cyclase MoaA compare
MMP_RS00115 -1.9 -10.1 radical SAM protein compare
MMP_RS08820 -1.8 -3.9 hypothetical protein compare
MMP_RS08460 -1.8 -2.4 proteasome-activating nucleotidase compare
MMP_RS04890 -1.8 -1.1 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03035 -1.8 -4.5 4-hydroxy-tetrahydrodipicolinate synthase compare
MMP_RS05430 -1.7 -3.8 TIGR00288 family NYN domain-containing protein compare
MMP_RS02165 -1.7 -7.5 tRNA-dihydrouridine synthase compare
MMP_RS01500 -1.7 -1.4 CBS domain-containing protein compare
MMP_RS06730 -1.7 -2.5 phosphopantothenate/pantothenate synthetase compare
MMP_RS01225 -1.7 -4.1 DUF5379 domain-containing protein compare
MMP_RS02240 -1.7 -2.6 methanogenesis marker 7 protein compare
MMP_RS04775 -1.7 -3.1 adenosylhomocysteinase compare
MMP_RS06345 -1.7 -7.1 formate dehydrogenase accessory sulfurtransferase FdhD compare
MMP_RS07630 -1.6 -1.8 ATP-binding cassette domain-containing protein compare
MMP_RS07525 -1.6 -6.0 4Fe-4S binding protein compare
MMP_RS00110 -1.6 -3.2 hypothetical protein compare
MMP_RS01545 -1.6 -1.3 CBS domain-containing protein compare
MMP_RS01610 -1.6 -2.8 hypothetical protein compare
MMP_RS07615 -1.6 -7.8 energy-coupling factor ABC transporter permease compare
MMP_RS07845 -1.6 -1.3 LL-diaminopimelate aminotransferase compare
MMP_RS06340 -1.6 -6.3 phosphoadenosine phosphosulfate reductase family protein compare
MMP_RS06020 -1.6 -3.9 archaeoflavoprotein AfpA compare
MMP_RS05865 -1.5 -2.6 hypothetical protein compare
MMP_RS05545 -1.5 -5.3 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS05930 -1.5 -1.8 3-isopropylmalate dehydratase large subunit compare
MMP_RS01220 -1.5 -5.7 hypothetical protein compare
MMP_RS03555 -1.5 -5.3 transcriptional regulator compare
MMP_RS06625 -1.5 -2.0 DNA primase compare
MMP_RS06725 -1.4 -7.2 hypothetical protein compare
MMP_RS01960 -1.4 -1.0 hypothetical protein compare
MMP_RS07765 -1.4 -8.8 sodium:alanine symporter family protein compare
MMP_RS01985 -1.4 -5.2 F420-dependent methylenetetrahydromethanopterin dehydrogenase compare
MMP_RS06600 -1.4 -1.4 class III signal peptide-containing protein compare
MMP_RS05250 -1.4 -3.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS05245 -1.4 -8.5 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS05020 -1.4 -3.3 hypothetical protein compare
MMP_RS00320 -1.4 -1.7 class I SAM-dependent methyltransferase compare
MMP_RS02235 -1.4 -6.5 CBS domain-containing protein compare
MMP_RS07365 -1.4 -8.6 2-phosphoglycerate kinase compare
MMP_RS01980 -1.3 -9.2 trimeric intracellular cation channel family protein compare
MMP_RS06395 -1.3 -3.4 ThiF family adenylyltransferase compare
MMP_RS00305 -1.3 -1.7 phosphoribosyl-ATP diphosphatase compare
MMP_RS06855 -1.3 -6.9 hypothetical protein compare
MMP_RS04710 -1.3 -1.3 hypothetical protein compare
MMP_RS00730 -1.3 -5.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS03205 -1.3 -1.4 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS06175 -1.3 -3.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS00315 -1.3 -6.5 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS06270 -1.3 -4.6 TIGR00300 family protein compare
MMP_RS05540 -1.3 -2.5 hypothetical protein compare
MMP_RS05265 -1.3 -1.6 2-isopropylmalate synthase compare
MMP_RS02245 -1.3 -3.4 hypothetical protein compare
MMP_RS01665 -1.3 -3.5 DUF2111 domain-containing protein compare
MMP_RS07200 -1.3 -5.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS08300 -1.3 -0.9 metal-sulfur cluster assembly factor compare
MMP_RS03025 -1.3 -2.8 molybdenum cofactor guanylyltransferase compare
MMP_RS00040 -1.3 -5.0 TIGR03576 family pyridoxal phosphate-dependent enzyme compare
MMP_RS00295 -1.2 -1.9 gamma carbonic anhydrase family protein compare
MMP_RS00810 -1.2 -5.9 topoisomerase DNA-binding C4 zinc finger domain-containing protein compare
MMP_RS07775 -1.2 -4.1 alanine dehydrogenase compare
MMP_RS04870 -1.2 -3.3 TIGR02253 family HAD-type hydrolase compare
MMP_RS07005 -1.2 -0.5 4Fe-4S binding protein compare
MMP_RS08715 -1.2 -1.1 formylmethanofuran dehydrogenase subunit B compare
MMP_RS07580 -1.2 -2.6 DUF356 domain-containing protein compare
MMP_RS05765 -1.2 -4.7 M42 family metallopeptidase compare
MMP_RS06930 -1.2 -7.1 MBL fold metallo-hydrolase compare
MMP_RS03445 -1.2 -0.8 methanogenesis marker 17 protein compare
MMP_RS01335 -1.2 -2.5 prefoldin subunit beta compare
MMP_RS00725 -1.2 -7.4 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS03600 -1.2 -1.7 triose-phosphate isomerase compare
MMP_RS00685 -1.1 -2.9 2-phospho-L-lactate guanylyltransferase compare
MMP_RS06105 -1.1 -4.3 hydrogenase maturation peptidase HycI compare
MMP_RS01795 -1.1 -1.1 methanogenesis marker 6 protein compare
MMP_RS07685 -1.1 -3.8 TIGR01212 family radical SAM protein compare
MMP_RS01005 -1.1 -1.0 riboflavin synthase compare
MMP_RS06015 -1.1 -7.0 flavodoxin family protein compare
MMP_RS01445 -1.1 -3.9 hypothetical protein compare
MMP_RS01575 -1.1 -5.0 aldolase compare
MMP_RS06895 -1.0 -1.0 selenocysteine-specific translation elongation factor compare
MMP_RS01100 -1.0 -1.0 ABC transporter ATP-binding protein compare
MMP_RS08745 -1.0 -2.7 CDP-2 3-bis-(O-geranylgeranyl)-sn-glycerol synthase compare
MMP_RS01325 -1.0 -1.5 dihydroneopterin aldolase family protein compare
MMP_RS02170 -1.0 -3.6 CBS domain-containing protein compare
MMP_RS07575 -1.0 -2.2 RNA ligase partner protein compare
MMP_RS01180 -1.0 -1.7 XTP/dITP diphosphatase compare
MMP_RS03580 -1.0 -1.5 signal recognition particle-docking protein FtsY compare
MMP_RS04850 -1.0 -7.6 UPF0254 family protein compare
MMP_RS06285 -1.0 -1.2 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS00985 -1.0 -3.0 CDC48 family AAA ATPase compare
MMP_RS01250 -1.0 -4.8 tRNA (guanine(26)-N(2))-dimethyltransferase compare
MMP_RS00735 -1.0 -3.6 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS02340 -1.0 -1.6 DNA-directed RNA polymerase subunit E'' compare
MMP_RS00900 -1.0 -1.6 50S ribosomal protein L39e compare
MMP_RS05510 -1.0 -4.3 Rrf2 family transcriptional regulator compare
MMP_RS07755 -1.0 -1.0 DUF555 domain-containing protein compare
MMP_RS07875 -1.0 -3.7 hypothetical protein compare
MMP_RS05875 -0.9 -3.6 hydroxyethylthiazole kinase compare
MMP_RS00695 -0.9 -0.7 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS03095 -0.9 -3.0 diphthine synthase compare
MMP_RS03305 -0.9 -4.7 winged helix-turn-helix domain-containing protein compare
MMP_RS08940 -0.9 -1.1 MetS family NSS transporter small subunit compare
MMP_RS08200 -0.9 -6.5 archaeosine synthase subunit alpha compare
MMP_RS07700 -0.9 -3.9 DUF1188 domain-containing protein compare
MMP_RS05345 -0.9 -3.2 hypothetical protein compare
MMP_RS03400 -0.9 -1.3 archease compare
MMP_RS06200 -0.9 -5.9 M24 family metallopeptidase compare
MMP_RS05845 -0.9 -0.8 tRNA-intron lyase compare
MMP_RS01195 -0.9 -0.9 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS08650 -0.9 -1.7 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS07695 -0.9 -2.4 DUF3236 domain-containing protein compare
MMP_RS01365 -0.8 -1.6 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS06315 -0.8 -0.5 cobalt-precorrin-7 (C(5))-methyltransferase compare
MMP_RS00620 -0.8 -3.7 4Fe-4S binding protein compare
MMP_RS02345 -0.8 -2.1 GTP-dependent dephospho-CoA kinase family protein compare
MMP_RS06215 -0.8 -1.9 30S ribosomal protein S6e compare
MMP_RS08860 -0.8 -2.5 MinD/ParA family protein compare
MMP_RS05815 -0.8 -1.0 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS02355 -0.8 -0.9 30S ribosomal protein S27ae compare
MMP_RS03800 -0.8 -2.2 hypothetical protein compare
MMP_RS01290 -0.8 -3.9 class III signal peptide-containing protein compare
MMP_RS03210 -0.8 -5.6 tRNA guanosine(15) transglycosylase TgtA compare
MMP_RS01495 -0.8 -4.4 TraB/GumN family protein compare
MMP_RS04090 -0.8 -1.0 hypothetical protein compare
MMP_RS06675 -0.8 -5.0 ADP-specific phosphofructokinase compare
MMP_RS00310 -0.8 -4.4 CBS domain-containing protein compare
MMP_RS01840 -0.8 -3.8 TIGR00289 family protein compare
MMP_RS06765 -0.8 -2.8 flap endonuclease-1 compare
MMP_RS08095 -0.8 -3.0 dethiobiotin synthase compare
MMP_RS03110 -0.8 -2.6 glycosyltransferase family 2 protein compare
MMP_RS08855 -0.7 -5.0 hypothetical protein compare
MMP_RS06605 -0.7 -4.5 DUF5814 domain-containing protein compare
MMP_RS05635 -0.7 -3.6 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS05295 -0.7 -4.1 minichromosome maintenance protein MCM compare
MMP_RS00185 -0.7 -4.8 potassium channel protein compare
MMP_RS02190 -0.7 -1.1 sulfopyruvate decarboxylase subunit alpha compare
MMP_RS00675 -0.7 -0.7 nitroreductase family protein compare
MMP_RS04500 -0.7 -5.3 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
MMP_RS08225 -0.7 -3.5 RimK family alpha-L-glutamate ligase compare
MMP_RS08290 -0.7 -3.0 DNA-binding protein Alba compare
MMP_RS06110 -0.7 -1.9 ATP-dependent protease LonB compare
MMP_RS06700 -0.7 -3.6 hypothetical protein compare
MMP_RS06035 -0.7 -3.5 glycosyltransferase family 2 protein compare
MMP_RS02145 -0.7 -2.7 winged helix-turn-helix transcriptional regulator compare
MMP_RS05090 -0.7 -4.5 CO dehydrogenase/CO-methylating acetyl-CoA synthase complex subunit beta compare
MMP_RS05920 -0.7 -0.3 50S ribosomal protein L37e compare
MMP_RS07880 -0.7 -3.6 AAA family ATPase compare
MMP_RS07860 -0.7 -0.5 hypothetical protein compare
MMP_RS02745 -0.7 -0.8 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments