Experiment set13S580 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete no stress control

200 most detrimental genes:

  gene name fitness t score description  
MMP_RS07415 +2.2 9.5 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
MMP_RS01370 +1.9 10.7 acetate--CoA ligase family protein compare
MMP_RS02885 +1.8 13.7 molybdopterin biosynthesis protein compare
MMP_RS07955 +1.6 7.1 FumA C-terminus/TtdB family hydratase beta subunit compare
MMP_RS06705 +1.5 5.4 formate/nitrite transporter family protein compare
MMP_RS07355 +1.5 1.8 transcription factor S compare
MMP_RS08320 +1.4 5.0 molybdopterin molybdotransferase MoeA compare
MMP_RS01890 +1.4 3.2 nucleotide sugar dehydrogenase compare
MMP_RS00750 +1.3 3.4 fumarate hydratase compare
MMP_RS03420 +1.2 2.9 acetolactate synthase small subunit compare
MMP_RS02605 +1.2 1.4 MotA/TolQ/ExbB proton channel family protein compare
MMP_RS01775 +1.1 1.7 TIGR00297 family protein compare
MMP_RS06590 +1.0 2.3 GNAT family N-acetyltransferase compare
MMP_RS01915 +1.0 5.6 DUF354 domain-containing protein compare
MMP_RS06555 +1.0 1.8 cupin domain-containing protein compare
MMP_RS06575 +0.9 4.7 fluoride efflux transporter CrcB compare
MMP_RS06570 +0.9 4.2 DUF190 domain-containing protein compare
MMP_RS01675 +0.9 2.0 hypothetical protein compare
MMP_RS01650 +0.9 1.1 sulfurtransferase TusA family protein compare
MMP_RS07345 +0.9 2.6 glycine synthesis protein GlyXL (from data) compare
MMP_RS01885 +0.8 3.8 Gfo/Idh/MocA family oxidoreductase compare
MMP_RS03215 +0.8 5.2 MBL fold metallo-hydrolase compare
MMP_RS07705 +0.8 4.6 transcriptional regulator compare
MMP_RS05535 +0.8 1.9 hypothetical protein compare
MMP_RS08275 +0.8 5.1 hypothetical protein compare
MMP_RS02880 +0.8 4.8 AmmeMemoRadiSam system radical SAM enzyme compare
MMP_RS01880 +0.8 3.0 DegT/DnrJ/EryC1/StrS family aminotransferase compare
MMP_RS08370 +0.8 0.6 cation:proton antiporter subunit C compare
MMP_RS03485 +0.8 4.3 TIGR00267 family protein compare
MMP_RS04605 +0.8 3.4 cobalt ECF transporter T component CbiQ compare
MMP_RS02045 +0.8 1.4 tRNA-Met compare
MMP_RS06670 +0.8 1.8 glucose-6-phosphate isomerase compare
MMP_RS05955 +0.7 1.8 CoB--CoM heterodisulfide reductase subunit C compare
MMP_RS05640 +0.7 3.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
MMP_RS01970 +0.7 4.1 TIGR04279 domain-containing protein compare
MMP_RS02110 +0.7 1.4 hypothetical protein compare
MMP_RS04620 +0.7 5.0 cobalt transporter CbiM compare
MMP_RS01685 +0.7 2.1 indolepyruvate oxidoreductase subunit beta compare
MMP_RS01660 +0.7 1.2 hypothetical protein compare
MMP_RS03330 +0.7 4.6 rubrerythrin family protein compare
MMP_RS06485 +0.7 0.7 zinc ribbon domain-containing protein compare
MMP_RS07125 +0.7 2.0 coenzyme F420-reducing hydrogenase FrhD protein compare
MMP_RS03675 +0.7 4.8 RimK family alpha-L-glutamate ligase compare
MMP_RS04615 +0.7 2.3 PDGLE domain-containing protein compare
MMP_RS08335 +0.7 2.4 NADH-quinone oxidoreductase subunit B family protein compare
MMP_RS01875 +0.7 3.3 N-acetyltransferase compare
MMP_RS00395 +0.7 1.2 MGMT family protein compare
MMP_RS02805 +0.6 0.9 HEPN domain-containing protein compare
MMP_RS07075 +0.6 1.8 phosphomannomutase/phosphoglucomutase compare
MMP_RS07725 +0.6 2.6 4Fe-4S dicluster domain-containing protein compare
MMP_RS01620 +0.6 1.5 hypothetical protein compare
MMP_RS03320 +0.6 2.2 metal-dependent transcriptional regulator compare
MMP_RS01150 +0.6 2.3 aldo/keto reductase compare
MMP_RS06535 +0.6 1.7 2-oxoacid:acceptor oxidoreductase family protein compare
MMP_RS05110 +0.6 4.0 16S ribosomal RNA methyltransferase A compare
MMP_RS00530 +0.6 2.4 tRNA pseudouridine(54/55) synthase Pus10 compare
MMP_RS06165 +0.6 3.7 ABC transporter permease compare
MMP_RS05720 +0.6 1.7 signal recognition particle subunit SRP19/SEC65 family protein compare
MMP_RS02290 +0.6 2.6 MBL fold metallo-hydrolase compare
MMP_RS08455 +0.6 1.9 multiprotein bridging factor aMBF1 compare
MMP_RS07555 +0.6 0.4 monovalent cation/H+ antiporter subunit E compare
MMP_RS08360 +0.6 2.0 hypothetical protein compare
MMP_RS04695 +0.6 2.5 selenide water dikinase SelD compare
MMP_RS08500 +0.5 2.2 pyridoxal 5'-phosphate synthase glutaminase subunit PdxT compare
MMP_RS05315 +0.5 1.1 hypothetical protein compare
MMP_RS04945 +0.5 2.2 hypothetical protein compare
MMP_RS01055 +0.5 1.8 hypothetical protein compare
MMP_RS01925 +0.5 2.6 DUF1616 domain-containing protein compare
MMP_RS00770 +0.5 2.0 hypothetical protein compare
MMP_RS06545 +0.5 1.8 ferredoxin family protein compare
MMP_RS06500 +0.5 2.0 ATP-binding protein compare
MMP_RS00960 +0.5 1.9 iron export ABC transporter permease subunit FetB compare
MMP_RS08390 +0.5 2.0 DUF5400 domain-containing protein compare
MMP_RS02300 +0.5 1.5 NAD(P)H-dependent oxidoreductase compare
MMP_RS01975 +0.5 3.1 hypothetical protein compare
MMP_RS01920 +0.5 3.0 glycosyltransferase family 2 protein compare
MMP_RS03475 +0.5 0.3 hypothetical protein compare
MMP_RS08340 +0.5 1.2 4Fe-4S binding protein compare
MMP_RS03965 +0.5 1.3 hypothetical protein compare
MMP_RS02310 +0.5 0.9 RimK-like ATPgrasp N-terminal domain-containing protein compare
MMP_RS08485 +0.5 2.6 tungstate ABC transporter substrate-binding protein WtpA compare
MMP_RS07835 +0.5 2.1 TldD/PmbA family protein compare
MMP_RS08365 +0.5 1.6 energy conserving hydrogenase EhbF compare
MMP_RS03520 +0.5 1.0 YwbE family protein compare
MMP_RS08415 +0.5 1.7 radical SAM protein compare
MMP_RS02560 +0.4 2.5 DUF2283 domain-containing protein compare
MMP_RS02645 +0.4 3.0 ArsR family transcriptional regulator compare
MMP_RS05685 +0.4 2.6 winged helix-turn-helix domain-containing protein compare
MMP_RS06860 +0.4 0.9 4Fe-4S binding protein compare
MMP_RS05365 +0.4 1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
MMP_RS02895 +0.4 2.8 DHH family phosphoesterase compare
MMP_RS01900 +0.4 2.6 hypothetical protein compare
MMP_RS07120 +0.4 2.6 coenzyme F420 hydrogenase subunit alpha compare
MMP_RS03495 +0.4 1.8 Na/Pi cotransporter family protein compare
MMP_RS01895 +0.4 2.2 flippase compare
MMP_RS03770 +0.4 1.9 hydroxylamine reductase compare
MMP_RS06335 +0.4 1.0 HAD family hydrolase compare
MMP_RS00700 +0.4 1.4 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS08345 +0.4 2.7 4Fe-4S binding protein compare
MMP_RS01910 +0.4 1.9 UDP-N-acetylglucosamine 2-epimerase (non-hydrolyzing) compare
MMP_RS02130 +0.4 1.2 zinc metalloprotease HtpX compare
MMP_RS08660 +0.4 1.4 DHH family phosphoesterase compare
MMP_RS09030 +0.4 2.3 hypothetical protein compare
MMP_RS08070 +0.4 0.9 DUF2096 domain-containing protein compare
MMP_RS04105 +0.4 2.2 MarR family transcriptional regulator compare
MMP_RS05675 +0.4 0.8 phosphate ABC transporter ATP-binding protein PstB compare
MMP_RS05950 +0.4 2.1 nickel-dependent hydrogenase large subunit compare
MMP_RS00655 +0.4 1.1 hypothetical protein compare
MMP_RS02590 +0.4 1.8 low molecular weight phosphatase family protein compare
MMP_RS01460 +0.4 1.5 hypothetical protein compare
MMP_RS01930 +0.4 2.5 hypothetical protein compare
MMP_RS01945 +0.4 2.2 DUF4350 domain-containing protein compare
MMP_RS07960 +0.4 2.1 sugar phosphate isomerase/epimerase compare
MMP_RS02870 +0.4 2.1 hypothetical protein compare
MMP_RS03150 +0.4 2.3 phosphoglycerate mutase compare
MMP_RS07915 +0.4 1.5 DUF4870 domain-containing protein compare
MMP_RS01320 +0.4 1.9 hypothetical protein compare
MMP_RS05990 +0.4 1.8 DsrE family protein compare
MMP_RS00705 +0.4 1.0 hypothetical protein compare
MMP_RS08380 +0.4 1.7 phosphatase PAP2 family protein compare
MMP_RS06075 +0.4 2.1 class I SAM-dependent methyltransferase compare
MMP_RS00825 +0.4 1.3 fumarylacetoacetate hydrolase family protein compare
MMP_RS06435 +0.3 1.1 CBS domain-containing protein compare
MMP_RS05310 +0.3 1.8 hypothetical protein compare
MMP_RS00760 +0.3 2.2 branched-chain-amino-acid transaminase compare
MMP_RS01210 +0.3 1.5 sodium:solute symporter compare
MMP_RS05360 +0.3 1.4 hypothetical protein compare
MMP_RS07895 +0.3 1.4 cytochrome c compare
MMP_RS07850 +0.3 1.0 prephenate dehydratase compare
MMP_RS05460 +0.3 2.1 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS06480 +0.3 0.9 ABC transporter substrate-binding protein compare
MMP_RS00975 +0.3 2.3 HD domain-containing protein compare
MMP_RS04055 +0.3 0.6 hypothetical protein compare
MMP_RS01805 +0.3 1.1 NUDIX hydrolase compare
MMP_RS05975 +0.3 1.7 hypothetical protein compare
MMP_RS01435 +0.3 1.1 DMT family transporter compare
MMP_RS04035 +0.3 0.8 hypothetical protein compare
MMP_RS08350 +0.3 0.4 hypothetical protein compare
MMP_RS01155 +0.3 1.3 XRE family transcriptional regulator compare
MMP_RS08215 +0.3 0.7 DUF483 domain-containing protein compare
MMP_RS07100 +0.3 1.9 hypothetical protein compare
MMP_RS02405 +0.3 1.7 hypothetical protein compare
MMP_RS05780 +0.3 2.1 multidrug resistance efflux transporter family protein compare
MMP_RS07800 +0.3 1.7 ATP-binding cassette domain-containing protein compare
MMP_RS01870 +0.3 1.7 acyl-CoA dehydratase activase compare
MMP_RS04520 +0.3 1.4 nucleoside deaminase compare
MMP_RS02955 +0.3 0.5 DJ-1/PfpI family protein compare
MMP_RS05970 +0.3 1.1 class II SORL domain-containing protein compare
MMP_RS01935 +0.3 1.6 DUF58 domain-containing protein compare
MMP_RS00665 +0.3 0.8 hypothetical protein compare
MMP_RS03100 +0.3 0.8 hypothetical protein compare
MMP_RS04040 +0.3 1.2 hypothetical protein compare
MMP_RS04410 +0.3 0.7 hypothetical protein compare
MMP_RS06045 +0.3 1.4 DNA polymerase compare
MMP_RS05945 +0.3 0.9 CBS domain-containing protein compare
MMP_RS07890 +0.3 0.5 OB-fold nucleic acid binding domain-containing protein compare
MMP_RS00125 +0.3 0.5 DUF2798 domain-containing protein compare
MMP_RS07135 +0.3 1.6 coenzyme F420 hydrogenase subunit beta compare
MMP_RS06170 +0.3 1.5 ABC transporter ATP-binding protein compare
MMP_RS08265 +0.3 1.0 rubrerythrin compare
MMP_RS01515 +0.3 1.9 PINc/VapC family ATPase compare
MMP_RS01855 +0.3 1.5 2-hydroxyacyl-CoA dehydratase family protein compare
MMP_RS00800 +0.3 1.6 Coenzyme F420 hydrogenase/dehydrogenase beta subunit C-terminal domain compare
MMP_RS07095 +0.3 0.7 PspC domain-containing protein compare
MMP_RS08700 +0.3 1.7 hypothetical protein compare
MMP_RS03735 +0.3 1.3 indolepyruvate ferredoxin oxidoreductase subunit alpha compare
MMP_RS03540 +0.3 1.0 DUF2178 domain-containing protein compare
MMP_RS08310 +0.3 0.6 TMEM165/GDT1 family protein compare
MMP_RS02005 +0.3 1.6 RNA ligase compare
MMP_RS07590 +0.3 1.5 hypothetical protein compare
MMP_RS02960 +0.3 1.5 class I SAM-dependent methyltransferase family protein compare
MMP_RS01905 +0.3 1.5 glycosyltransferase compare
MMP_RS02775 +0.3 1.5 hypothetical protein compare
MMP_RS01605 +0.3 1.2 hypothetical protein compare
MMP_RS06905 +0.3 0.4 hypothetical protein compare
MMP_RS05825 +0.3 1.0 peptidyl-prolyl cis-trans isomerase compare
MMP_RS00660 +0.3 1.8 alkaline phosphatase family protein compare
MMP_RS04145 +0.3 0.5 hypothetical protein compare
MMP_RS06310 +0.2 0.6 NAD(P)/FAD-dependent oxidoreductase compare
MMP_RS02810 +0.2 1.3 hypothetical protein compare
MMP_RS03085 +0.2 1.3 endonuclease III compare
MMP_RS08705 +0.2 1.0 sulfopyruvate decarboxylase subunit beta compare
MMP_RS06250 +0.2 1.1 hypothetical protein compare
MMP_RS03900 +0.2 0.7 minichromosome maintenance protein MCM compare
MMP_RS01165 +0.2 1.2 DUF434 domain-containing protein compare
MMP_RS07855 +0.2 1.2 class I SAM-dependent methyltransferase compare
MMP_RS03395 +0.2 0.9 hypothetical protein compare
MMP_RS02970 +0.2 1.3 hypothetical protein compare
MMP_RS06655 +0.2 1.4 glycoside hydrolase family 15 protein compare
MMP_RS00640 +0.2 1.1 ABC transporter substrate-binding protein compare
MMP_RS06560 +0.2 1.1 hypothetical protein compare
MMP_RS08990 +0.2 1.4 hypothetical protein compare
MMP_RS01105 +0.2 1.0 hypothetical protein compare
MMP_RS08830 +0.2 1.0 GTP-binding protein compare
MMP_RS01095 +0.2 0.9 iron ABC transporter permease compare
MMP_RS05790 +0.2 1.1 HDIG domain-containing protein compare
MMP_RS02525 +0.2 1.8 DUF2254 domain-containing protein compare
MMP_RS02920 +0.2 1.4 DMT family transporter compare
MMP_RS00335 +0.2 0.7 5-amino-6-(D-ribitylamino)uracil--L-tyrosine 4-hydroxyphenyl transferase CofH compare
MMP_RS00155 +0.2 1.1 heavy metal-binding domain-containing protein compare


Specific Phenotypes

None in this experiment

For Methanococcus maripaludis S2 in no stress control experiments