Experiment set13S579 for Methanococcus maripaludis S2

Compare to:

McCas_formate_complete Phenazine methosulfate 0.0333333333333333 mM

200 most important genes:

  gene name fitness t score description  
MMP_RS02235 -3.8 -11.4 CBS domain-containing protein compare
MMP_RS04090 -3.8 -3.0 hypothetical protein compare
MMP_RS03250 -3.7 -3.2 MJ1244 family protein compare
MMP_RS06350 -3.7 -5.8 HesA/MoeB/ThiF family protein compare
MMP_RS08720 -3.6 -0.9 4Fe-4S binding protein compare
MMP_RS01795 -3.5 -1.1 methanogenesis marker 6 protein compare
MMP_RS05700 -3.5 -12.2 TfuA-related McrA-glycine thioamidation protein compare
MMP_RS08460 -3.5 -2.4 proteasome-activating nucleotidase compare
MMP_RS01195 -3.5 -1.0 metalloregulator ArsR/SmtB family transcription factor compare
MMP_RS06230 -3.4 -2.3 helix-turn-helix domain-containing protein compare
MMP_RS05460 -3.3 -10.6 YcaO-related McrA-glycine thioamidation protein compare
MMP_RS01720 -3.3 -2.0 replication factor C large subunit compare
MMP_RS01225 -3.3 -4.6 DUF5379 domain-containing protein compare
MMP_RS06600 -3.3 -1.0 class III signal peptide-containing protein compare
MMP_RS06840 -3.2 -0.8 DNA-directed RNA polymerase subunit N compare
MMP_RS01665 -3.2 -4.1 DUF2111 domain-containing protein compare
MMP_RS05920 -3.1 -0.4 50S ribosomal protein L37e compare
MMP_RS05845 -3.1 -1.5 tRNA-intron lyase compare
MMP_RS08300 -3.0 -0.7 metal-sulfur cluster assembly factor compare
MMP_RS02240 -2.9 -2.3 methanogenesis marker 7 protein compare
MMP_RS08210 -2.9 -1.7 phosphatidylglycerophosphatase A compare
MMP_RS07635 -2.9 -6.9 MogA/MoaB family molybdenum cofactor biosynthesis protein compare
MMP_RS01755 -2.8 -0.7 DUF2097 domain-containing protein compare
MMP_RS00695 -2.8 -0.5 biotin--[acetyl-CoA-carboxylase] ligase compare
MMP_RS01005 -2.8 -0.7 riboflavin synthase compare
MMP_RS03640 -2.7 -3.1 archaeal proteasome endopeptidase complex subunit beta compare
MMP_RS01800 -2.7 -3.3 TIGR00303 family protein compare
MMP_RS08650 -2.7 -2.8 glutamine--fructose-6-phosphate transaminase (isomerizing) compare
MMP_RS08790 -2.6 -1.8 translation initiation factor IF-2 subunit alpha compare
MMP_RS06020 -2.6 -3.1 archaeoflavoprotein AfpA compare
MMP_RS04710 -2.6 -1.3 hypothetical protein compare
MMP_RS07600 -2.6 -1.9 Ni-sirohydrochlorin a c-diamide synthase compare
MMP_RS01500 -2.6 -1.6 CBS domain-containing protein compare
MMP_RS06730 -2.5 -1.6 phosphopantothenate/pantothenate synthetase compare
MMP_RS08635 -2.5 -1.3 UbiA family prenyltransferase compare
MMP_RS08715 -2.5 -1.2 formylmethanofuran dehydrogenase subunit B compare
MMP_RS06625 -2.5 -1.4 DNA primase compare
MMP_RS07385 -2.5 -2.0 protein translocase SEC61 complex subunit gamma compare
MMP_RS06175 -2.5 -5.5 winged helix-turn-helix transcriptional regulator compare
MMP_RS04585 -2.4 -8.7 AIR synthase related protein compare
MMP_RS04890 -2.4 -0.6 adenylyltransferase/cytidyltransferase family protein compare
MMP_RS03315 -2.4 -0.7 ferrous iron transport protein A compare
MMP_RS07345 -2.3 -3.9 glycine synthesis protein GlyXL (from data) compare
MMP_RS06285 -2.3 -1.5 precorrin-6Y C5 15-methyltransferase (decarboxylating) subunit CbiT compare
MMP_RS05430 -2.2 -4.1 TIGR00288 family NYN domain-containing protein compare
MMP_RS01380 -2.2 -3.4 PHP domain-containing protein compare
MMP_RS01020 -2.2 -0.7 3 4-dihydroxy-2-butanone-4-phosphate synthase compare
MMP_RS04780 -2.2 -2.4 ribonuclease P compare
MMP_RS06015 -2.2 -4.7 flavodoxin family protein compare
MMP_RS03025 -2.2 -4.3 molybdenum cofactor guanylyltransferase compare
MMP_RS03555 -2.1 -6.0 transcriptional regulator compare
MMP_RS06295 -2.1 -4.4 methanogenesis marker 14 protein compare
MMP_RS07115 -2.1 -5.9 MBL fold metallo-hydrolase compare
MMP_RS08165 -2.1 -1.9 phosphoglycerate dehydrogenase compare
MMP_RS00900 -2.1 -1.4 50S ribosomal protein L39e compare
MMP_RS03960 -2.1 -0.7 hypothetical protein compare
MMP_RS00300 -2.1 -0.4 6 7-dimethyl-8-ribityllumazine synthase compare
MMP_RS04990 -2.1 -6.1 aquaporin family protein compare
MMP_RS08820 -2.0 -4.2 hypothetical protein compare
MMP_RS01175 -2.0 -2.1 triphosphoribosyl-dephospho-CoA synthase compare
MMP_RS02900 -2.0 -0.5 imidazoleglycerol-phosphate dehydratase HisB compare
MMP_RS06120 -2.0 -1.6 UPF0147 family protein compare
MMP_RS01275 -1.9 -3.5 class III signal peptide-containing protein compare
MMP_RS07365 -1.9 -10.2 2-phosphoglycerate kinase compare
MMP_RS08200 -1.9 -12.6 archaeosine synthase subunit alpha compare
MMP_RS04870 -1.9 -4.1 TIGR02253 family HAD-type hydrolase compare
MMP_RS00305 -1.9 -1.2 phosphoribosyl-ATP diphosphatase compare
MMP_RS08195 -1.9 -6.1 hypothetical protein compare
MMP_RS05245 -1.9 -8.5 archaeosine biosynthesis radical SAM protein RaSEA compare
MMP_RS02110 -1.9 -1.4 hypothetical protein compare
MMP_RS08940 -1.8 -1.0 MetS family NSS transporter small subunit compare
MMP_RS03470 -1.8 -6.2 phosphoadenosine phosphosulfate reductase family protein conserved
MMP_RS03400 -1.8 -1.4 archease compare
MMP_RS00895 -1.8 -2.5 hypothetical protein compare
MMP_RS00515 -1.8 -0.6 DUF655 domain-containing protein compare
MMP_RS01700 -1.8 -0.7 dihydroxy-acid dehydratase compare
MMP_RS05440 -1.7 -6.6 winged helix-turn-helix transcriptional regulator compare
MMP_RS07820 -1.7 -3.4 UPF0104 family protein compare
MMP_RS06400 -1.7 -0.8 4Fe-4S binding protein compare
MMP_RS09020 -1.7 -0.9 hypothetical protein compare
MMP_RS00730 -1.7 -4.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdB compare
MMP_RS06975 -1.7 -1.8 sulfide-dependent adenosine diphosphate thiazole synthase compare
MMP_RS03600 -1.7 -1.3 triose-phosphate isomerase compare
MMP_RS03205 -1.7 -1.0 peptidyl-tRNA hydrolase Pth2 compare
MMP_RS03445 -1.7 -0.6 methanogenesis marker 17 protein compare
MMP_RS08645 -1.7 -3.8 UPF0179 family protein compare
MMP_RS04980 -1.7 -8.1 DUF2193 domain-containing protein compare
MMP_RS00675 -1.7 -0.7 nitroreductase family protein compare
MMP_RS07540 -1.6 -2.6 CBS domain-containing protein compare
MMP_RS05550 -1.6 -0.4 cation:proton antiporter compare
MMP_RS08675 -1.6 -1.9 class III signal peptide-containing protein compare
MMP_RS07380 -1.6 -1.2 transcription elongation factor Spt5 compare
MMP_RS01280 -1.6 -8.3 DUF515 domain-containing protein compare
MMP_RS01265 -1.6 -2.2 hypothetical protein compare
MMP_RS01085 -1.5 -1.2 hypothetical protein compare
MMP_RS06290 -1.5 -2.9 DNA repair and recombination protein RadA compare
MMP_RS00110 -1.5 -2.0 hypothetical protein compare
MMP_RS07445 -1.5 -4.0 helix-turn-helix domain-containing protein compare
MMP_RS01575 -1.5 -3.6 aldolase compare
MMP_RS01655 -1.5 -2.2 DsrE family protein compare
MMP_RS05250 -1.5 -2.7 NFYB/HAP3 family transcription factor subunit compare
MMP_RS00035 -1.5 -6.6 DUF2098 family protein compare
MMP_RS01290 -1.5 -7.5 class III signal peptide-containing protein compare
MMP_RS07005 -1.4 -0.3 4Fe-4S binding protein compare
MMP_RS00735 -1.4 -1.5 5 10-methenyltetrahydromethanopterin hydrogenase compare
MMP_RS00140 -1.4 -3.8 DUF192 domain-containing protein compare
MMP_RS00250 -1.4 -8.6 Flp pilus assembly complex ATPase component TadA compare
MMP_RS01325 -1.4 -1.1 dihydroneopterin aldolase family protein compare
MMP_RS02165 -1.4 -4.9 tRNA-dihydrouridine synthase compare
MMP_RS07525 -1.4 -4.2 4Fe-4S binding protein compare
MMP_RS00245 -1.4 -9.3 type II secretion system F family protein compare
MMP_RS08290 -1.3 -3.6 DNA-binding protein Alba compare
MMP_RS07620 -1.3 -2.8 energy-coupling factor ABC transporter substrate-binding protein compare
MMP_RS06725 -1.3 -3.2 hypothetical protein compare
MMP_RS04985 -1.3 -2.5 DUF2180 family protein compare
MMP_RS06895 -1.3 -0.8 selenocysteine-specific translation elongation factor compare
MMP_RS05875 -1.3 -2.5 hydroxyethylthiazole kinase compare
MMP_RS00240 -1.3 -7.7 type II secretion system F family protein compare
MMP_RS00725 -1.3 -3.2 5 10-methenyltetrahydromethanopterin hydrogenase cofactor biosynthesis protein HmdC compare
MMP_RS00570 -1.3 -1.1 protein-L-isoaspartate O-methyltransferase compare
MMP_RS07200 -1.3 -3.2 [5-(aminomethyl)furan-3-yl]methyl phosphate kinase compare
MMP_RS06915 -1.3 -2.6 metallophosphoesterase compare
MMP_RS01610 -1.3 -1.5 hypothetical protein compare
MMP_RS08855 -1.3 -4.1 hypothetical protein compare
MMP_RS01270 -1.2 -8.0 prepilin peptidase compare
MMP_RS03020 -1.2 -3.3 peptidylprolyl isomerase compare
MMP_RS06735 -1.2 -2.7 class I SAM-dependent rRNA methyltransferase compare
MMP_RS00685 -1.2 -1.8 2-phospho-L-lactate guanylyltransferase compare
MMP_RS01600 -1.2 -1.5 50S ribosomal protein L15e compare
MMP_RS03340 -1.2 -0.6 ABC transporter ATP-binding protein compare
MMP_RS08280 -1.2 -1.5 proteasome assembly chaperone family protein compare
MMP_RS06885 -1.2 -1.2 50S ribosome-binding GTPase compare
MMP_RS08600 -1.2 -1.2 flagellar protein D compare
MMP_RS03580 -1.2 -1.9 signal recognition particle-docking protein FtsY compare
MMP_RS03210 -1.2 -5.9 tRNA guanosine(15) transglycosylase TgtA compare
MMP_RS06675 -1.2 -3.7 ADP-specific phosphofructokinase compare
MMP_RS05815 -1.2 -1.2 NOL1/NOP2/sun family putative RNA methylase compare
MMP_RS06970 -1.2 -3.5 ribosomal protein S18-alanine N-acetyltransferase compare
MMP_RS05925 -1.2 -1.9 small nuclear ribonucleoprotein compare
MMP_RS07355 -1.2 -0.5 transcription factor S compare
MMP_RS00130 -1.2 -0.7 nickel-responsive transcriptional regulator NikR compare
MMP_RS01285 -1.2 -5.1 hypothetical protein compare
MMP_RS06035 -1.2 -4.4 glycosyltransferase family 2 protein compare
MMP_RS03305 -1.1 -3.2 winged helix-turn-helix domain-containing protein compare
MMP_RS02175 -1.1 -0.5 DUF1611 domain-containing protein compare
MMP_RS01790 -1.1 -2.9 restriction endonuclease compare
MMP_RS06920 -1.1 -4.1 AAA family ATPase compare
MMP_RS05435 -1.1 -3.8 5'/3'-nucleotidase SurE compare
MMP_RS07330 -1.1 -7.5 membrane protein compare
MMP_RS03110 -1.1 -3.3 glycosyltransferase family 2 protein compare
MMP_RS01365 -1.1 -1.5 archaeal proteasome endopeptidase complex subunit alpha compare
MMP_RS05985 -1.1 -2.0 hypothetical protein compare
MMP_RS01305 -1.1 -7.3 hypothetical protein compare
MMP_RS08860 -1.1 -2.9 MinD/ParA family protein compare
MMP_RS03125 -1.1 -2.2 cell division ATPase MinD compare
MMP_RS05635 -1.1 -3.0 NAD-dependent epimerase/dehydratase family protein compare
MMP_RS03450 -1.1 -0.8 glycine synthesis protein GlyXS (from data) compare
MMP_RS08435 -1.1 -1.1 Era-like GTP-binding protein compare
MMP_RS00430 -1.0 -1.3 hypothetical protein compare
MMP_RS03550 -1.0 -0.7 DUF2124 domain-containing protein compare
MMP_RS01295 -1.0 -4.9 hypothetical protein compare
MMP_RS03300 -1.0 -0.4 TOBE domain-containing protein compare
MMP_RS06965 -1.0 -1.9 TIGR04014 family B12-binding domain/radical SAM domain-containing protein compare
MMP_RS04900 -1.0 -6.8 hypothetical protein compare
MMP_RS06110 -1.0 -1.9 ATP-dependent protease LonB compare
MMP_RS07755 -1.0 -0.6 DUF555 domain-containing protein compare
MMP_RS08590 -1.0 -2.0 flagellin compare
MMP_RS05865 -1.0 -1.0 hypothetical protein compare
MMP_RS04195 -1.0 -1.9 flavodoxin compare
MMP_RS01310 -1.0 -5.8 hypothetical protein compare
MMP_RS03800 -1.0 -1.8 hypothetical protein compare
MMP_RS07845 -1.0 -0.7 LL-diaminopimelate aminotransferase compare
MMP_RS07735 -1.0 -0.3 2-ketoisovalerate ferredoxin oxidoreductase subunit alpha compare
MMP_RS03080 -1.0 -1.6 universal stress protein compare
MMP_RS05580 -1.0 -5.0 glycosyltransferase compare
MMP_RS04685 -1.0 -1.2 DUF126 domain-containing protein compare
MMP_RS06855 -1.0 -4.3 hypothetical protein compare
MMP_RS05295 -1.0 -3.8 minichromosome maintenance protein MCM compare
MMP_RS05020 -1.0 -1.5 hypothetical protein compare
MMP_RS05540 -1.0 -1.6 hypothetical protein compare
MMP_RS09055 -1.0 -0.5 CAP domain-containing protein compare
MMP_RS07700 -0.9 -3.5 DUF1188 domain-containing protein compare
MMP_RS07900 -0.9 -1.0 YeeE/YedE family protein compare
MMP_RS07605 -0.9 -1.5 diadenylate cyclase compare
MMP_RS04720 -0.9 -1.3 DedA family protein compare
MMP_RS03390 -0.9 -2.6 malate dehydrogenase compare
MMP_RS05695 -0.9 -2.5 phospholipase D-like domain-containing protein compare
MMP_RS06430 -0.9 -2.8 6-carboxytetrahydropterin synthase QueD compare
MMP_RS01315 -0.9 -6.7 DUF2341 domain-containing protein compare
MMP_RS00315 -0.9 -1.5 Nif3-like dinuclear metal center hexameric protein compare
MMP_RS02280 -0.9 -0.4 DUF211 domain-containing protein compare
MMP_RS08595 -0.9 -0.5 flagellar protein C compare
MMP_RS02875 -0.9 -4.4 chorismate pyruvate-lyase family protein compare
MMP_RS07185 -0.9 -3.8 pyridoxal phosphate-dependent aminotransferase compare
MMP_RS07625 -0.9 -1.7 cobalt ECF transporter T component CbiQ compare
MMP_RS08615 -0.9 -1.2 flagellar protein G compare
MMP_RS00185 -0.9 -3.9 potassium channel protein compare
MMP_RS07640 -0.9 -1.8 mechanosensitive ion channel family protein compare
MMP_RS06760 -0.9 -1.1 hypothetical protein compare
MMP_RS03460 -0.9 -3.1 U32 family peptidase compare


Specific Phenotypes

For 5 genes in this experiment

For stress Phenazine methosulfate in Methanococcus maripaludis S2

For stress Phenazine methosulfate across organisms