Experiment set13S311 for Enterobacter sp. TBS_079

Compare to:

AMD2036 coinoculated with AMD2910 on LB to a starting OD of 0.001

200 most detrimental genes:

  gene name fitness t score description  
MPMX20_04692 +2.6 4.2 hypothetical protein compare
MPMX20_02839 +2.2 12.5 Response regulator UvrY compare
MPMX20_03655 +1.9 11.4 Signal transduction histidine-protein kinase BarA compare
MPMX20_00873 +1.7 1.8 Protein rof compare
MPMX20_04243 +1.6 2.1 hypothetical protein compare
MPMX20_03590 +1.4 2.0 hypothetical protein compare
MPMX20_02216 +1.4 3.4 hypothetical protein compare
MPMX20_02307 +1.4 2.8 hypothetical protein compare
MPMX20_01967 +1.4 1.7 hypothetical protein compare
MPMX20_04167 +1.4 1.8 Ribosomal protein L11 methyltransferase compare
MPMX20_03260 +1.3 2.6 hypothetical protein compare
MPMX20_02704 +1.3 1.9 hypothetical protein compare
MPMX20_04670 +1.3 1.3 hypothetical protein compare
MPMX20_03153 +1.3 1.8 hypothetical protein compare
MPMX20_01958 +1.3 1.0 Fumarase D compare
MPMX20_01697 +1.2 2.1 Putative aminoacrylate peracid reductase RutC compare
MPMX20_03334 +1.2 1.9 hypothetical protein compare
MPMX20_03740 +1.2 2.3 PTS system N,N'-diacetylchitobiose-specific EIIA component compare
MPMX20_03240 +1.2 3.6 hypothetical protein compare
MPMX20_04253 +1.2 1.1 Malonate decarboxylase acyl carrier protein compare
MPMX20_04584 +1.1 2.2 Alpha-D-glucose 1-phosphate phosphatase YihX compare
MPMX20_01378 +1.1 3.2 Nicotinamide riboside transporter PnuC compare
MPMX20_03527 +1.1 2.9 HTH-type transcriptional regulator NimR compare
MPMX20_03248 +1.1 2.1 Colicin V production protein compare
MPMX20_00494 +1.1 3.0 hypothetical protein compare
MPMX20_01438 +1.0 2.7 Glutamine transport ATP-binding protein GlnQ compare
MPMX20_03269 +1.0 3.4 3-ketoacyl-CoA thiolase FadI compare
MPMX20_00283 +1.0 4.0 hypothetical protein compare
MPMX20_02821 +1.0 4.2 High-affinity branched-chain amino acid transport system permease protein LivH compare
MPMX20_03569 +1.0 2.7 Inner membrane protein YqaA compare
MPMX20_02624 +1.0 3.1 Nitrate/nitrite binding protein NrtA compare
MPMX20_04462 +1.0 1.6 Magnesium transport protein CorA compare
MPMX20_01695 +1.0 1.9 putative malonic semialdehyde reductase RutE compare
MPMX20_00210 +1.0 0.9 PTS system cellobiose-specific EIIB component compare
MPMX20_04734 +1.0 2.7 hypothetical protein compare
MPMX20_02035 +1.0 2.9 Fumarate and nitrate reduction regulatory protein compare
MPMX20_03811 +0.9 2.0 hypothetical protein compare
MPMX20_00391 +0.9 2.0 hypothetical protein compare
MPMX20_01099 +0.9 1.9 hypothetical protein compare
MPMX20_01908 +0.9 2.1 D-beta-hydroxybutyrate dehydrogenase compare
MPMX20_01025 +0.9 3.0 hypothetical protein compare
MPMX20_02912 +0.9 0.8 hypothetical protein compare
MPMX20_03095 +0.9 0.9 hypothetical protein compare
MPMX20_02626 +0.9 1.9 Protein YchN compare
MPMX20_02827 +0.9 2.6 hypothetical protein compare
MPMX20_04060 +0.9 2.4 hypothetical protein compare
MPMX20_00728 +0.9 0.8 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_03629 +0.9 2.1 Protein-L-isoaspartate O-methyltransferase compare
MPMX20_03466 +0.9 4.0 Bifunctional chorismate mutase/prephenate dehydratase compare
MPMX20_01593 +0.9 3.1 Alkanesulfonate monooxygenase compare
MPMX20_00968 +0.9 1.5 hypothetical protein compare
MPMX20_03879 +0.9 3.4 3',5'-cyclic adenosine monophosphate phosphodiesterase CpdA compare
MPMX20_02282 +0.9 2.8 Sensor histidine kinase RcsC compare
MPMX20_04259 +0.9 1.9 Protein YhfA compare
MPMX20_03147 +0.9 1.8 putative protein YejG compare
MPMX20_03033 +0.9 2.0 GDP-mannose mannosyl hydrolase compare
MPMX20_01281 +0.8 2.6 hypothetical protein compare
MPMX20_01836 +0.8 2.0 hypothetical protein compare
MPMX20_03177 +0.8 2.7 Transcriptional regulatory protein RcsB compare
MPMX20_01789 +0.8 2.6 hypothetical protein compare
MPMX20_02793 +0.8 3.2 hypothetical protein compare
MPMX20_02727 +0.8 3.4 23S rRNA (guanine(745)-N(1))-methyltransferase compare
MPMX20_02716 +0.8 1.7 hypothetical protein compare
MPMX20_00529 +0.8 2.4 Antitoxin RelB compare
MPMX20_04029 +0.8 1.1 Cyclic dipyrimidine nucleotide synthase compare
MPMX20_04061 +0.8 2.5 Ubiquinone biosynthesis accessory factor UbiJ compare
MPMX20_03721 +0.8 2.4 hypothetical protein compare
MPMX20_01952 +0.8 0.7 hypothetical protein compare
MPMX20_04727 +0.8 2.9 hypothetical protein compare
MPMX20_02932 +0.8 1.8 hypothetical protein compare
MPMX20_04558 +0.8 1.6 Protein YiiM compare
MPMX20_04546 +0.8 1.1 hypothetical protein compare
MPMX20_00263 +0.8 2.5 hypothetical protein compare
MPMX20_02400 +0.8 2.5 hypothetical protein compare
MPMX20_00920 +0.8 2.3 hypothetical protein compare
MPMX20_04059 +0.8 1.0 hypothetical protein compare
MPMX20_02535 +0.8 0.8 Pyrimidine-specific ribonucleoside hydrolase RihB compare
MPMX20_03932 +0.8 0.9 hypothetical protein compare
MPMX20_02198 +0.8 1.7 Glycerol-3-phosphate regulon repressor compare
MPMX20_04644 +0.7 2.1 6-phosphogluconate phosphatase compare
MPMX20_02387 +0.7 2.5 Respiratory nitrate reductase 2 beta chain compare
MPMX20_02812 +0.7 1.2 hypothetical protein compare
MPMX20_03302 +0.7 2.8 HTH-type transcriptional regulator CynR compare
MPMX20_00029 +0.7 2.4 hypothetical protein compare
MPMX20_03621 +0.7 2.6 Phenolic acid decarboxylase compare
MPMX20_01379 +0.7 2.0 Zinc transporter ZitB compare
MPMX20_04436 +0.7 2.9 Fatty acid oxidation complex subunit alpha compare
MPMX20_01680 +0.7 2.5 PTS system glucose-specific EIICB component compare
MPMX20_00742 +0.7 2.4 Glutathione-regulated potassium-efflux system ancillary protein KefF compare
MPMX20_01446 +0.7 0.8 Small protein MntS compare
MPMX20_04297 +0.7 0.9 putative [Fe-S]-dependent transcriptional repressor FeoC compare
MPMX20_02899 +0.7 1.5 hypothetical protein compare
MPMX20_03913 +0.7 2.2 hypothetical protein compare
MPMX20_01470 +0.7 3.1 Glutathione-binding protein GsiB compare
MPMX20_04257 +0.7 1.9 hypothetical protein compare
MPMX20_01407 +0.7 2.4 High-affinity branched-chain amino acid transport ATP-binding protein LivF compare
MPMX20_03814 +0.7 1.0 hypothetical protein compare
MPMX20_03720 +0.7 2.5 HTH-type transcriptional regulator HdfR compare
MPMX20_01637 +0.7 2.6 hypothetical protein compare
MPMX20_02272 +0.7 1.5 hypothetical protein compare
MPMX20_03970 +0.7 1.6 hypothetical protein compare
MPMX20_00618 +0.7 2.2 hypothetical protein compare
MPMX20_04263 +0.7 3.0 Aminodeoxychorismate synthase component 2 compare
MPMX20_03996 +0.7 1.7 UTP pyrophosphatase compare
MPMX20_03448 +0.7 1.8 Autonomous glycyl radical cofactor compare
MPMX20_02101 +0.7 4.0 hypothetical protein compare
MPMX20_03725 +0.7 1.8 putative protein YjdJ compare
MPMX20_01347 +0.7 1.5 5-oxoprolinase subunit A compare
MPMX20_01247 +0.7 2.2 Isochorismate synthase EntC compare
MPMX20_01085 +0.7 2.5 HTH-type transcriptional regulator CueR compare
MPMX20_01707 +0.7 2.4 Iron uptake system component EfeO compare
MPMX20_04331 +0.7 2.1 Lipopolysaccharide export system ATP-binding protein LptB compare
MPMX20_03005 +0.7 2.2 Imidazole glycerol phosphate synthase subunit HisH compare
MPMX20_04599 +0.7 2.2 Der GTPase-activating protein YihI compare
MPMX20_01906 +0.7 3.8 Anti-FlhC(2)FlhD(4) factor YdiV compare
MPMX20_03785 +0.7 1.5 L-aspartate dehydrogenase compare
MPMX20_00122 +0.7 1.5 putative protein YibN compare
MPMX20_03755 +0.7 1.7 Inner membrane protein YgfX compare
MPMX20_03450 +0.7 2.6 putative tRNA/rRNA methyltransferase YfiF compare
MPMX20_01153 +0.7 1.9 HTH-type transcriptional activator RhaS compare
MPMX20_02748 +0.7 1.8 Protein YobA compare
MPMX20_02135 +0.7 1.3 hypothetical protein compare
MPMX20_03833 +0.7 2.2 putative membrane protein YdfK compare
MPMX20_01004 +0.7 2.0 putative lipoprotein YajI compare
MPMX20_02956 +0.7 1.8 Very short patch repair protein compare
MPMX20_00179 +0.7 2.0 2-dehydro-3-deoxygluconokinase compare
MPMX20_02918 +0.7 2.0 hypothetical protein compare
MPMX20_00810 +0.6 1.2 hypothetical protein compare
MPMX20_02659 +0.6 2.5 Serine/threonine-protein kinase PknD compare
MPMX20_02575 +0.6 1.9 putative acyl-CoA thioester hydrolase compare
MPMX20_02665 +0.6 1.8 hypothetical protein compare
MPMX20_01035 +0.6 1.9 7-cyano-7-deazaguanine synthase compare
MPMX20_02994 +0.6 1.9 Inner membrane protein YeeA compare
MPMX20_02360 +0.6 1.6 putative D,D-dipeptide transport ATP-binding protein DdpF compare
MPMX20_02960 +0.6 1.5 N-acetylmuramic acid 6-phosphate etherase compare
MPMX20_00816 +0.6 1.4 hypothetical protein compare
MPMX20_04555 +0.6 2.2 Periplasmic protein CpxP compare
MPMX20_01488 +0.6 1.1 hypothetical protein compare
MPMX20_03245 +0.6 2.2 Lysine/arginine/ornithine-binding periplasmic protein compare
MPMX20_02356 +0.6 3.4 putative D,D-dipeptide-binding periplasmic protein DdpA compare
MPMX20_02841 +0.6 4.5 Regulatory protein SdiA compare
MPMX20_02150 +0.6 1.1 Acyl-coenzyme A thioesterase PaaI compare
MPMX20_01226 +0.6 1.8 hypothetical protein compare
MPMX20_00287 +0.6 2.2 Holin-like protein CidA compare
MPMX20_02746 +0.6 1.8 hypothetical protein compare
MPMX20_02681 +0.6 2.6 hypothetical protein compare
MPMX20_02128 +0.6 1.9 hypothetical protein compare
MPMX20_02663 +0.6 1.7 hypothetical protein compare
MPMX20_00441 +0.6 0.6 Phosphatidylserine decarboxylase proenzyme compare
MPMX20_04580 +0.6 3.0 Carboxylesterase NlhH compare
MPMX20_03865 +0.6 2.0 NADPH:quinone oxidoreductase MdaB compare
MPMX20_01987 +0.6 1.9 HTH-type transcriptional repressor NemR compare
MPMX20_02176 +0.6 1.1 hypothetical protein compare
MPMX20_04258 +0.6 3.0 Phosphoribulokinase, plasmid compare
MPMX20_02598 +0.6 0.5 tRNA-Tyr compare
MPMX20_02864 +0.6 1.1 hypothetical protein compare
MPMX20_04270 +0.6 0.9 Nitrite reductase (NADH) small subunit compare
MPMX20_04387 +0.6 1.9 hypothetical protein compare
MPMX20_03748 +0.6 2.0 Isopentenyl-diphosphate Delta-isomerase compare
MPMX20_00038 +0.6 1.0 hypothetical protein compare
MPMX20_02810 +0.6 2.1 putative bacterial non-heme ferritin compare
MPMX20_02391 +0.6 1.9 hypothetical protein compare
MPMX20_04422 +0.6 1.8 hypothetical protein compare
MPMX20_00580 +0.6 1.6 Antirestriction protein KlcA compare
MPMX20_01046 +0.6 1.7 DNA base-flipping protein compare
MPMX20_01057 +0.6 1.1 50S ribosomal protein L36 2 compare
MPMX20_03963 +0.6 1.0 hypothetical protein compare
MPMX20_02958 +0.6 2.6 putative protein YedJ compare
MPMX20_03624 +0.6 2.1 HTH-type transcriptional regulator DmlR compare
MPMX20_00617 +0.6 1.4 hypothetical protein compare
MPMX20_00925 +0.6 3.2 Sigma factor-binding protein Crl compare
MPMX20_02957 +0.6 3.5 DNA-cytosine methyltransferase compare
MPMX20_04285 +0.6 1.0 ADP compounds hydrolase NudE compare
MPMX20_01856 +0.6 1.7 CTP pyrophosphohydrolase compare
MPMX20_03102 +0.6 1.6 Phosphinothricin N-acetyltransferase compare
MPMX20_01816 +0.6 1.0 High frequency lysogenization protein HflD compare
MPMX20_04453 +0.6 1.4 Biotin transporter compare
MPMX20_00465 +0.6 1.6 hypothetical protein compare
MPMX20_04542 +0.6 2.1 Glycerol uptake facilitator protein compare
MPMX20_00981 +0.6 1.4 Pyrimidine/purine nucleoside phosphorylase compare
MPMX20_00482 +0.6 1.5 hypothetical protein compare
MPMX20_04759 +0.6 1.0 IS3 family transposase ISYen3 compare
MPMX20_04677 +0.6 2.3 hypothetical protein compare
MPMX20_01618 +0.6 2.4 hypothetical protein compare
MPMX20_03696 +0.6 2.2 Protein tas compare
MPMX20_00551 +0.6 1.8 Putative 2-dehydro-3-deoxy-D-gluconate aldolase YagE compare
MPMX20_03386 +0.6 0.4 putative protein YfgJ compare
MPMX20_00219 +0.6 1.9 NADH pyrophosphatase compare
MPMX20_02143 +0.5 0.8 1,2-phenylacetyl-CoA epoxidase, subunit B compare
MPMX20_02916 +0.5 1.1 hypothetical protein compare
MPMX20_01520 +0.5 2.2 hypothetical protein compare
MPMX20_04122 +0.5 1.8 Aldehyde reductase Ahr compare
MPMX20_03695 +0.5 1.0 putative lipoprotein YgdR compare
MPMX20_00656 +0.5 1.7 hypothetical protein compare
MPMX20_03262 +0.5 1.6 putative membrane transporter protein YfcA compare
MPMX20_02693 +0.5 0.7 hypothetical protein compare
MPMX20_00474 +0.5 1.7 L-ribulose-5-phosphate 3-epimerase UlaE compare
MPMX20_01389 +0.5 1.0 Multidrug efflux pump accessory protein AcrZ compare
MPMX20_02569 +0.5 1.6 Putative sulfur carrier protein YedF compare
MPMX20_01533 +0.5 1.2 hypothetical protein compare


Specific Phenotypes

For 3 genes in this experiment