Experiment set13S297 for Enterobacter sp. TBS_079

Compare to:

AMD2036 coinoculated with AMD2587 on TSA to a starting OD of 0.001

200 most important genes:

  gene name fitness t score description  
MPMX20_03488 -5.7 -2.2 Persistence and stress-resistance antitoxin PasI compare
MPMX20_01355 -5.5 -0.8 Dihydrolipoyllysine-residue succinyltransferase component of 2-oxoglutarate dehydrogenase complex compare
MPMX20_01354 -5.4 -1.9 2-oxoglutarate dehydrogenase E1 component compare
MPMX20_01972 -5.4 -0.8 tRNA-Val compare
MPMX20_00720 -5.2 -1.3 Chaperone protein DnaK compare
MPMX20_00626 -4.9 -1.4 hypothetical protein compare
MPMX20_04028 -4.9 -1.7 hypothetical protein compare
MPMX20_01073 -4.7 -1.8 Nucleoid-associated protein YbaB compare
MPMX20_04552 -4.7 -2.9 ATP-dependent 6-phosphofructokinase isozyme 1 compare
MPMX20_01984 -4.7 -1.7 Ribonuclease T compare
MPMX20_00480 -4.6 -1.6 50S ribosomal protein L9 compare
MPMX20_00708 -4.6 -2.7 Aerobic respiration control protein ArcA compare
MPMX20_01370 -4.6 -4.2 Peptidoglycan-associated lipoprotein compare
MPMX20_02767 -4.5 -2.2 Holliday junction ATP-dependent DNA helicase RuvA compare
MPMX20_04165 -4.5 -2.8 putative membrane protein YhdT compare
MPMX20_01550 -4.5 -1.8 Thioredoxin reductase compare
MPMX20_02287 -4.5 -2.2 hypothetical protein compare
MPMX20_03338 -4.5 -5.1 Phosphoribosylaminoimidazole-succinocarboxamide synthase compare
MPMX20_04465 -4.4 -3.1 Tyrosine recombinase XerC compare
MPMX20_01030 -4.4 -8.5 Lon protease compare
MPMX20_00825 -4.4 -1.1 Aspartate 1-decarboxylase compare
MPMX20_01369 -4.3 -9.8 Tol-Pal system protein TolB compare
MPMX20_03435 -4.3 -1.7 Pyridoxine 5'-phosphate synthase compare
MPMX20_03498 -4.2 -1.6 3-isopropylmalate dehydratase small subunit 1 compare
MPMX20_04768 -4.1 -22.1 hypothetical protein compare
MPMX20_01548 -4.1 -2.5 putative ABC transporter ATP-binding/permease protein compare
MPMX20_03018 -4.0 -4.6 hypothetical protein compare
MPMX20_03334 -4.0 -0.8 hypothetical protein compare
MPMX20_01256 -3.9 -1.6 hypothetical protein compare
MPMX20_00258 -3.9 -4.5 Diacylglycerol kinase compare
MPMX20_04110 -3.9 -4.9 Nitrogen regulatory protein compare
MPMX20_03408 -3.9 -2.1 Co-chaperone protein HscB compare
MPMX20_03753 -3.9 -7.0 Tyrosine recombinase XerD compare
MPMX20_01361 -3.9 -3.8 Cytochrome bd-I ubiquinol oxidase subunit 1 compare
MPMX20_01768 -3.9 -1.7 Large ribosomal RNA subunit accumulation protein YceD compare
MPMX20_01118 -3.9 -0.8 hypothetical protein compare
MPMX20_04275 -3.8 -1.7 Ribulose-phosphate 3-epimerase compare
MPMX20_04601 -3.8 -1.5 DNA polymerase I compare
MPMX20_01368 -3.8 -4.1 hypothetical protein compare
MPMX20_00106 -3.8 -3.7 Lipopolysaccharide core biosynthesis protein RfaG compare
MPMX20_00014 -3.8 -4.6 hypothetical protein compare
MPMX20_02997 -3.8 -12.4 Exodeoxyribonuclease I compare
MPMX20_01367 -3.8 -6.4 Tol-Pal system protein TolR compare
MPMX20_04491 -3.7 -5.2 Thioredoxin 1 compare
MPMX20_01734 -3.7 -10.0 Lipid A biosynthesis lauroyltransferase compare
MPMX20_03382 -3.7 -1.8 Inosine-5'-monophosphate dehydrogenase compare
MPMX20_00728 -3.6 -0.7 FKBP-type 16 kDa peptidyl-prolyl cis-trans isomerase compare
MPMX20_02701 -3.6 -1.4 Fatty acid metabolism regulator protein compare
MPMX20_04272 -3.5 -0.7 hypothetical protein compare
MPMX20_03773 -3.5 -4.0 HTH-type transcriptional regulator ArgP compare
MPMX20_03479 -3.5 -1.5 30S ribosomal protein S16 compare
MPMX20_03022 -3.5 -2.4 D-inositol-3-phosphate glycosyltransferase compare
MPMX20_04119 -3.5 -1.3 DNA polymerase III subunit chi compare
MPMX20_03780 -3.5 -2.4 Transketolase 1 compare
MPMX20_02757 -3.5 -2.0 Glucose-6-phosphate 1-dehydrogenase compare
MPMX20_03580 -3.5 -6.4 Protein RecA compare
MPMX20_02770 -3.4 -3.8 Dihydroneopterin triphosphate diphosphatase compare
MPMX20_03010 -3.4 -4.7 UDP-glucose 4-epimerase compare
MPMX20_03440 -3.4 -5.3 Elongation factor 4 compare
MPMX20_01969 -3.4 -3.4 Carbonic anhydrase 1 compare
MPMX20_01552 -3.4 -3.3 hypothetical protein compare
MPMX20_03012 -3.4 -11.9 Glucose-1-phosphate thymidylyltransferase 1 compare
MPMX20_01350 -3.4 -3.7 Succinate dehydrogenase cytochrome b556 subunit compare
MPMX20_04639 -3.4 -0.8 Phosphate-binding protein PstS compare
MPMX20_02645 -3.3 -7.0 Ribosome-binding ATPase YchF compare
MPMX20_03409 -3.3 -2.0 Iron-binding protein IscA compare
MPMX20_01749 -3.3 -5.2 Flagella synthesis protein FlgN compare
MPMX20_02856 -3.3 -9.6 Flagellar secretion chaperone FliS compare
MPMX20_03767 -3.3 -5.0 Xaa-Pro aminopeptidase compare
MPMX20_04626 -3.3 -2.8 tRNA uridine 5-carboxymethylaminomethyl modification enzyme MnmG compare
MPMX20_04463 -3.2 -8.1 DNA helicase II compare
MPMX20_03013 -3.2 -10.5 dTDP-glucose 4,6-dehydratase compare
MPMX20_04279 -3.2 -2.2 Shikimate kinase 1 compare
MPMX20_04483 -3.2 -1.9 Lipid III flippase compare
MPMX20_03227 -3.2 -5.3 Phosphate acetyltransferase compare
MPMX20_01366 -3.2 -3.0 Tol-Pal system protein TolQ compare
MPMX20_01413 -3.2 -2.3 Molybdopterin synthase sulfur carrier subunit compare
MPMX20_03396 -3.1 -4.5 Nucleoside diphosphate kinase compare
MPMX20_04393 -3.1 -6.8 Low-affinity inorganic phosphate transporter 1 compare
MPMX20_01382 -3.0 -2.5 2,3-bisphosphoglycerate-dependent phosphoglycerate mutase compare
MPMX20_02574 -3.0 -3.6 putative intracellular septation protein A compare
MPMX20_03683 -3.0 -2.1 RecBCD enzyme subunit RecB compare
MPMX20_04642 -3.0 -1.2 Phosphate import ATP-binding protein PstB compare
MPMX20_01333 -3.0 -3.9 Negative modulator of initiation of replication compare
MPMX20_03260 -3.0 -2.0 hypothetical protein compare
MPMX20_00831 -2.9 -4.5 RNA polymerase-binding transcription factor DksA compare
MPMX20_01549 -2.9 -1.8 ATP-binding/permease protein CydD compare
MPMX20_03463 -2.9 -6.4 Ribosomal large subunit pseudouridine synthase D compare
MPMX20_04595 -2.9 -1.1 Glutamine synthetase compare
MPMX20_04197 -2.9 -6.4 Trk system potassium uptake protein TrkA compare
MPMX20_01901 -2.9 -1.9 Integration host factor subunit alpha compare
MPMX20_03685 -2.9 -5.1 RecBCD enzyme subunit RecC compare
MPMX20_03047 -2.9 -5.5 dCTP deaminase compare
MPMX20_04276 -2.9 -6.6 DNA adenine methylase compare
MPMX20_04640 -2.8 -1.7 Phosphate transport system permease protein PstC compare
MPMX20_03390 -2.8 -6.1 Outer membrane protein assembly factor BamB compare
MPMX20_00102 -2.8 -2.2 hypothetical protein compare
MPMX20_03929 -2.7 -3.6 hypothetical protein compare
MPMX20_00226 -2.7 -7.6 Bifunctional purine biosynthesis protein PurH compare
MPMX20_03864 -2.7 -6.0 Sensor protein QseC compare
MPMX20_04467 -2.6 -5.4 Diaminopimelate epimerase compare
MPMX20_04597 -2.6 -6.6 DNA-binding transcriptional regulator NtrC compare
MPMX20_02295 -2.6 -1.4 hypothetical protein compare
MPMX20_01028 -2.6 -1.6 ATP-dependent Clp protease proteolytic subunit compare
MPMX20_03207 -2.5 -5.1 NADH-quinone oxidoreductase subunit M compare
MPMX20_03407 -2.5 -2.7 Chaperone protein HscA compare
MPMX20_03226 -2.5 -3.8 Acetate kinase compare
MPMX20_04278 -2.5 -3.6 3-dehydroquinate synthase compare
MPMX20_02879 -2.5 -1.3 hypothetical protein compare
MPMX20_00745 -2.5 -4.4 Bis(5'-nucleosyl)-tetraphosphatase, symmetrical compare
MPMX20_03212 -2.5 -3.7 NADH-quinone oxidoreductase subunit H compare
MPMX20_04170 -2.5 -1.5 DNA-binding protein Fis compare
MPMX20_00775 -2.4 -1.7 Ribosomal RNA small subunit methyltransferase H compare
MPMX20_02477 -2.4 -3.7 Peptide transport system ATP-binding protein SapD compare
MPMX20_03014 -2.4 -10.2 6-phosphogluconate dehydrogenase, decarboxylating compare
MPMX20_02116 -2.4 -2.1 hypothetical protein compare
MPMX20_04171 -2.4 -1.6 hypothetical protein compare
MPMX20_01757 -2.4 -3.8 Flagellar basal-body rod protein FlgG compare
MPMX20_01967 -2.4 -1.1 hypothetical protein compare
MPMX20_00899 -2.4 -1.3 Ribonuclease HI compare
MPMX20_00749 -2.4 -2.9 Chaperone SurA compare
MPMX20_00721 -2.4 -2.3 Chaperone protein DnaJ compare
MPMX20_01029 -2.4 -4.3 ATP-dependent Clp protease ATP-binding subunit ClpX compare
MPMX20_00197 -2.3 -1.2 tRNA-Tyr compare
MPMX20_01098 -2.3 -3.4 N5-carboxyaminoimidazole ribonucleotide mutase compare
MPMX20_04650 -2.3 -2.9 tRNA modification GTPase MnmE compare
MPMX20_01181 -2.3 -4.3 Putative transferase YhbX compare
MPMX20_01362 -2.3 -3.4 Cytochrome bd-I ubiquinol oxidase subunit 2 compare
MPMX20_03253 -2.3 -4.7 tRNA pseudouridine synthase A compare
MPMX20_01765 -2.3 -3.3 Ribonuclease E compare
MPMX20_02208 -2.2 -2.7 Transcriptional repressor FrmR compare
MPMX20_03443 -2.2 -3.2 Anti-sigma-E factor RseA compare
MPMX20_04532 -2.2 -1.9 Met repressor compare
MPMX20_03310 -2.2 -3.3 Phosphoenolpyruvate-protein phosphotransferase compare
MPMX20_04641 -2.2 -2.6 Phosphate transport system permease protein PstA compare
MPMX20_02635 -2.2 -1.8 Release factor glutamine methyltransferase compare
MPMX20_00753 -2.2 -7.5 RNA polymerase-associated protein RapA compare
MPMX20_01386 -2.2 -4.4 UDP-glucose 4-epimerase compare
MPMX20_03568 -2.1 -5.9 Glutamate--cysteine ligase compare
MPMX20_02766 -2.1 -2.7 Holliday junction ATP-dependent DNA helicase RuvB compare
MPMX20_00730 -2.1 -4.3 Glucose-6-phosphate isomerase compare
MPMX20_02475 -2.1 -3.4 Putrescine export system permease protein SapB compare
MPMX20_01542 -2.1 -2.3 Cold shock-like protein CspD compare
MPMX20_04385 -2.1 -5.9 hypothetical protein compare
MPMX20_03309 -2.0 -1.8 Phosphocarrier protein HPr compare
MPMX20_01750 -2.0 -4.2 Negative regulator of flagellin synthesis compare
MPMX20_01775 -2.0 -4.6 3-oxoacyl-[acyl-carrier-protein] synthase 2 compare
MPMX20_02973 -2.0 -6.1 hypothetical protein compare
MPMX20_03429 -2.0 -2.6 Phosphatidylglycerophosphatase C compare
MPMX20_04137 -2.0 -2.5 Inner membrane protein YhcB compare
MPMX20_03490 -2.0 -2.4 SsrA-binding protein compare
MPMX20_01607 -2.0 -2.7 Outer membrane protein A compare
MPMX20_00807 -1.9 -3.0 Pyruvate dehydrogenase E1 component compare
MPMX20_00812 -1.9 -5.9 Aconitate hydratase B compare
MPMX20_03021 -1.9 -4.7 hypothetical protein compare
MPMX20_01762 -1.9 -3.6 Flagellar hook-associated protein 3 compare
MPMX20_00452 -1.9 -4.8 tRNA dimethylallyltransferase compare
MPMX20_01567 -1.9 -5.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
MPMX20_01686 -1.9 -3.3 putative HTH-type transcriptional regulator YybR compare
MPMX20_01446 -1.9 -1.6 Small protein MntS compare
MPMX20_01790 -1.9 -5.1 NADH dehydrogenase compare
MPMX20_03487 -1.9 -4.3 Outer membrane protein assembly factor BamE compare
MPMX20_02799 -1.9 -3.0 Motility protein B compare
MPMX20_03678 -1.8 -0.7 tRNA-Met compare
MPMX20_03019 -1.8 -7.3 hypothetical protein compare
MPMX20_03636 -1.8 -2.3 Adenylyl-sulfate kinase compare
MPMX20_00176 -1.8 -2.7 Cold shock protein CspA compare
MPMX20_01334 -1.8 -4.9 Phosphoglucomutase compare
MPMX20_00739 -1.8 -3.9 Carbamoyl-phosphate synthase small chain compare
MPMX20_03209 -1.8 -1.6 NADH-quinone oxidoreductase subunit K compare
MPMX20_02704 -1.8 -1.4 hypothetical protein compare
MPMX20_01648 -1.8 -1.3 hypothetical protein compare
MPMX20_01162 -1.8 -2.6 hypothetical protein compare
MPMX20_02929 -1.8 -0.7 hypothetical protein compare
MPMX20_00998 -1.8 -2.1 Sec translocon accessory complex subunit YajC compare
MPMX20_03267 -1.7 -1.2 Phosphohistidine phosphatase SixA compare
MPMX20_04133 -1.7 -1.8 Stringent starvation protein A compare
MPMX20_04399 -1.7 -3.9 Glutathione reductase compare
MPMX20_02474 -1.7 -4.4 Peptide transport periplasmic protein SapA compare
MPMX20_04115 -1.7 -5.5 Aerobic respiration control sensor protein ArcB compare
MPMX20_04559 -1.7 -1.8 Superoxide dismutase [Mn] compare
MPMX20_03754 -1.7 -2.7 Flavodoxin 2 compare
MPMX20_03805 -1.7 -5.6 Glutathione synthetase compare
MPMX20_04444 -1.7 -0.9 Sec-independent protein translocase protein TatA compare
MPMX20_01153 -1.7 -2.4 HTH-type transcriptional activator RhaS compare
MPMX20_02010 -1.7 -3.5 Ion-translocating oxidoreductase complex subunit B compare
MPMX20_02011 -1.7 -5.5 Ion-translocating oxidoreductase complex subunit A compare
MPMX20_02899 -1.6 -2.6 hypothetical protein compare
MPMX20_01942 -1.6 -3.7 HTH-type transcriptional repressor BluR compare
MPMX20_00740 -1.6 -5.3 Carbamoyl-phosphate synthase large chain compare
MPMX20_00722 -1.6 -4.8 Na(+)/H(+) antiporter NhaA compare
MPMX20_03571 -1.6 -0.8 tRNA-Arg compare
MPMX20_00453 -1.6 -1.1 RNA-binding protein Hfq compare
MPMX20_04466 -1.6 -1.9 hypothetical protein compare
MPMX20_02478 -1.6 -4.1 Putrescine export system ATP-binding protein SapF compare
MPMX20_03301 -1.6 -1.2 hypothetical protein compare
MPMX20_01813 -1.6 -8.5 hypothetical protein compare
MPMX20_04442 -1.6 -2.5 Sec-independent protein translocase protein TatC compare
MPMX20_04189 -1.6 -3.5 Shikimate dehydrogenase (NADP(+)) compare
MPMX20_01656 -1.5 -2.6 Uric acid degradation bifunctional protein compare


Specific Phenotypes

For 3 genes in this experiment