Experiment set13IT095 for Herbaspirillum seropedicae SmR1

200 most important genes:

gene	name	fitness	t score	description
HSERO_RS21035		-5.6	-2.7	hypothetical protein
HSERO_RS10020		-5.3	-2.5	flippase
HSERO_RS00815		-5.2	-2.6	sulfurtransferase
HSERO_RS21060		-4.7	-5.6	hypothetical protein
HSERO_RS17110		-4.6	-2.3	ribonuclease H
HSERO_RS12300		-4.6	-3.2	hypothetical protein
HSERO_RS20985		-4.6	-1.3	serine acetyltransferase
HSERO_RS04335		-4.5	-2.5	sodium:proton antiporter
HSERO_RS04585		-4.5	-22.0	hypothetical protein
HSERO_RS15655		-4.4	-2.1	methylcitrate synthase
HSERO_RS16475		-4.3	-1.7	tryptophan synthase subunit alpha
HSERO_RS09990		-4.1	-1.7	glycosyl transferase
HSERO_RS03450		-4.1	-1.7	energy transducer protein TonB
HSERO_RS20970		-4.1	-9.5	NDP-N-acetyl-D-mannosaminuronate dehydrogenase
HSERO_RS21005		-4.1	-6.9	asparagine synthase
HSERO_RS03085		-4.0	-2.5	3-methyl-2-oxobutanoate hydroxymethyltransferase
HSERO_RS19805		-3.9	-4.6	glycosyl transferase
HSERO_RS08115		-3.8	-1.1	acyl-CoA-binding protein
HSERO_RS17980		-3.7	-2.1	GTP-binding protein
HSERO_RS13965		-3.7	-1.5	single-stranded DNA exonuclease
HSERO_RS21010		-3.6	-6.9	LPS biosynthesis protein
HSERO_RS23455		-3.6	-2.5	methylcrotonoyl-CoA carboxylase
HSERO_RS21025		-3.5	-4.9	hypothetical protein
HSERO_RS12210		-3.5	-5.2	GntR family transcriptional regulator
HSERO_RS10035		-3.3	-3.4	hypothetical protein
HSERO_RS20990		-3.3	-6.4	aminotransferase DegT
HSERO_RS09720		-3.2	-2.2	membrane protein
HSERO_RS03540		-2.9	-1.2	dimethyladenosine transferase
HSERO_RS23945		-2.9	-2.1	cobyric acid synthase CobQ
HSERO_RS15630		-2.8	-0.8	exodeoxyribonuclease III
HSERO_RS15070		-2.8	-0.8	ribosomal large subunit pseudouridine synthase D
HSERO_RS07970		-2.8	-1.9	formyltetrahydrofolate deformylase
HSERO_RS20625		-2.7	-1.1	phenylacetate-CoA oxygenase
HSERO_RS23475		-2.7	-3.8	hydroxymethylglutaryl-CoA lyase
HSERO_RS03285		-2.6	-1.0	succinyl-CoA synthetase subsunit alpha
HSERO_RS15575		-2.6	-1.1	uroporphyrin-III C-methyltransferase
HSERO_RS04325		-2.5	-3.5	helicase I
HSERO_RS13280		-2.5	-2.0	precorrin-4 C11-methyltransferase
HSERO_RS18630		-2.5	-1.2	hemerythrin
HSERO_RS09725		-2.5	-6.6	ABC transporter
HSERO_RS03780		-2.4	-2.7	type VI secretion protein
HSERO_RS19590		-2.4	-0.9	dihydropyrimidine dehydrogenase subunit A
HSERO_RS17105		-2.3	-1.3	DNA polymerase III subunit epsilon
HSERO_RS15435		-2.3	-3.0	enoyl-CoA hydratase
HSERO_RS21475		-2.3	-1.3	recombinase XerC
HSERO_RS06650		-2.2	-2.0	MarR family transcriptional regulator
HSERO_RS20980		-2.2	-4.3	oxidoreductase
HSERO_RS08535		-2.2	-5.8	glycine/betaine ABC transporter substrate-binding protein
HSERO_RS08530		-2.2	-3.8	glycine/betaine ABC transporter permease
HSERO_RS17530		-2.2	-2.8	RpiR family transcriptional regulator
HSERO_RS20315		-2.2	-3.0	imidazole glycerol phosphate synthase
HSERO_RS22935		-2.1	-6.5	metallothio multi-domain protein
HSERO_RS21450		-2.1	-2.0	lipid A biosynthesis acyltransferase
HSERO_RS22325		-2.0	-1.9	hypothetical protein
HSERO_RS01815		-2.0	-3.3	gamma-glutamyl kinase
HSERO_RS14000		-2.0	-1.7	hypothetical protein
HSERO_RS09290		-2.0	-3.0	ribonuclease R
HSERO_RS16825		-2.0	-1.5	NADP-dependent malic enzyme oxidoreductase
HSERO_RS02015		-2.0	-3.5	peptidase M23
HSERO_RS20345		-2.0	-3.0	histidinol dehydrogenase
HSERO_RS13960		-1.9	-2.6	hypothetical protein
HSERO_RS13000		-1.9	-3.8	chemotaxis protein CheY
HSERO_RS20325		-1.9	-4.8	IGP synthase, amidotransferase subunit (EC 4.3.2.10) (from data)
HSERO_RS20750		-1.9	-4.4	cytochrome C oxidase subunit I
HSERO_RS21065		-1.9	-5.3	hypothetical protein
HSERO_RS08105		-1.9	-4.1	sodium:proton antiporter
HSERO_RS09740		-1.8	-3.6	histidine kinase
HSERO_RS08605		-1.8	-1.5	Hsp33 chaperonin
HSERO_RS19135		-1.8	-1.1	exodeoxyribonuclease
HSERO_RS10805		-1.8	-1.4	succinyldiaminopimelate aminotransferase
HSERO_RS12975		-1.7	-1.4	phytoene synthase
HSERO_RS04330		-1.7	-4.0	ATP-dependent exonuclease
HSERO_RS20310		-1.7	-2.7	phosphoribosyl-AMP cyclohydrolase (EC 3.5.4.19) (from data)
HSERO_RS08790		-1.7	-0.7	hypothetical protein
HSERO_RS06530		-1.6	-0.9	muconolactone delta-isomerase
HSERO_RS08725		-1.6	-2.4	transcriptional regulator
HSERO_RS21040		-1.6	-3.1	3-oxoacyl-ACP synthase
HSERO_RS02275		-1.6	-0.8	hypothetical protein
HSERO_RS06170		-1.6	-1.1	S-adenosylmethionine tRNA ribosyltransferase
HSERO_RS16040		-1.6	-1.9	cytochrome CBB3
HSERO_RS08655		-1.6	-1.5	acetolactate synthase
HSERO_RS07300		-1.6	-2.1	glutamate--cysteine ligase
HSERO_RS09455		-1.6	-1.9	NAD synthetase
HSERO_RS01870		-1.6	-2.9	ABC transporter permease
HSERO_RS18600		-1.6	-1.1	transcriptional regulator
HSERO_RS09730		-1.6	-3.9	glycoside hydrolase family 43
HSERO_RS19630		-1.6	-0.4	AMP nucleosidase
HSERO_RS11665		-1.5	-1.8	nitrate ABC transporter ATP-binding protein
HSERO_RS00805		-1.5	-1.4	preprotein translocase subunit SecB
HSERO_RS23655		-1.5	-1.1	phosphonate ABC transporter permease
HSERO_RS16835		-1.5	-5.1	phosphatidylglycerophosphatase
HSERO_RS05125		-1.5	-2.5	DeoR family transcripitonal regulator
HSERO_RS20610		-1.5	-1.1	phenylacetate-CoA oxygenase subunit PaaA
HSERO_RS21100		-1.4	-6.1	UDP-N-acetylglucosamine 2-epimerase
HSERO_RS04340		-1.4	-3.7	gamma-glutamyl ligase
HSERO_RS05540		-1.4	-0.6	cytochrome C'
HSERO_RS17900		-1.4	-1.2	3,4-dihydroxy-2-butanone 4-phosphate synthase
HSERO_RS00220		-1.4	-0.8	hypothetical protein
HSERO_RS01880		-1.4	-1.6	N-acetyl-anhydromuranmyl-L-alanine amidase
HSERO_RS19785		-1.4	-2.1	sensor histidine kinase
HSERO_RS02260		-1.4	-1.6	DNA polymerase I
HSERO_RS02090		-1.4	-0.7	Holliday junction DNA helicase RuvA
HSERO_RS11305		-1.4	-4.1	membrane protein
HSERO_RS05325		-1.4	-1.0	ribose ABC transporter permease
HSERO_RS10010		-1.4	-1.8	UDP-glucose 6-dehydrogenase
HSERO_RS03550		-1.4	-1.9	glyoxalase I
HSERO_RS11460		-1.4	-1.0	universal stress protein
HSERO_RS05970		-1.3	-0.9	ABC transporter
HSERO_RS17155		-1.3	-1.8	RNA helicase
HSERO_RS12015		-1.3	-0.8	molecular chaperone DnaK
HSERO_RS03810		-1.3	-2.5	hypothetical protein
HSERO_RS02205		-1.3	-1.4	phosphatase
HSERO_RS18990		-1.3	-2.3	pyrroline-5-carboxylate reductase
HSERO_RS05640		-1.3	-3.2	N-acetyltransferase GCN5
HSERO_RS02215		-1.3	-0.4	D-arabinitol 4-dehydrogenase
HSERO_RS20835		-1.3	-1.6	ABC transporter substrate-binding protein
HSERO_RS08640		-1.3	-1.4	hypothetical protein
HSERO_RS23440		-1.3	-3.4	isovaleryl-CoA dehydrogenase
HSERO_RS21080		-1.3	-4.1	glycosyl transferase
HSERO_RS00810		-1.3	-1.2	glutaredoxin
HSERO_RS08290		-1.3	-2.1	leucine/isoleucine/valine transporter ATP-binding subunit
HSERO_RS05390		-1.3	-1.3	twitching motility protein PilT
HSERO_RS09155		-1.3	-3.8	DNA topoisomerase IV subunit B
HSERO_RS12560		-1.3	-2.5	antitoxin
HSERO_RS19450		-1.3	-2.5	indole-3-glycerol-phosphate synthase
HSERO_RS10350		-1.3	-1.6	flagellin
HSERO_RS00435		-1.2	-3.2	glutathione synthetase
HSERO_RS22175		-1.2	-0.7	hypothetical protein
HSERO_RS04445		-1.2	-1.3	hypothetical protein
HSERO_RS03445		-1.2	-3.0	biopolymer transport transmembrane protein
HSERO_RS02910		-1.2	-3.0	IclR family transcriptional regulator
HSERO_RS18015		-1.2	-2.0	transcriptional regulator
HSERO_RS08275		-1.2	-3.2	branched-chain amino acid transporter permease subunit LivH
HSERO_RS16405		-1.2	-2.3	peptidase M50
HSERO_RS22025		-1.1	-2.6	aromatic amino acid aminotransferase
HSERO_RS19910		-1.1	-1.6	AraC family transcriptional regulator
HSERO_RS18050		-1.1	-1.4	glycerophosphodiester phosphodiesterase
HSERO_RS10460		-1.1	-0.8	homoserine dehydrogenase
HSERO_RS15795		-1.1	-2.1	galactaro-1,5-lactonase (from data)
HSERO_RS07005		-1.1	-2.7	hypothetical protein
HSERO_RS09915		-1.1	-1.0	transcriptional regulator
HSERO_RS02720		-1.1	-2.3	IclR family transcriptional regulator
HSERO_RS21375		-1.1	-1.0	N5-glutamine S-adenosyl-L-methionine-dependent methyltransferase
HSERO_RS20260		-1.1	-1.2	2-alkenal reductase
HSERO_RS08960		-1.1	-2.3	2-hydroxyacid dehydrogenase
HSERO_RS04025		-1.1	-1.4	hypothetical protein
HSERO_RS09220		-1.1	-1.5	hypothetical protein
HSERO_RS14930		-1.1	-1.6	aldolase
HSERO_RS07755		-1.1	-2.8	glutamate racemase
HSERO_RS18970		-1.1	-2.6	hypothetical protein
HSERO_RS10155		-1.1	-2.4	antiactivator of flagellar biosynthesis FleN protein
HSERO_RS20350		-1.1	-3.7	ATP phosphoribosyltransferase (EC 2.4.2.17) (from data)
HSERO_RS20240		-1.1	-0.5	cytochrome B
HSERO_RS03510		-1.1	-3.0	proline aminopeptidase P II
HSERO_RS13265		-1.1	-1.9	G3E family GTPase
HSERO_RS10815		-1.1	-1.5	chromosome segregation protein SMC
HSERO_RS07160		-1.1	-2.6	phospho-2-dehydro-3-deoxyheptonate aldolase
HSERO_RS20490		-1.0	-1.5	XRE family transcriptional regulator
HSERO_RS09050		-1.0	-0.7	2-aminoadipate aminotransferase
HSERO_RS12085		-1.0	-2.7	RNA polymerase sigma-E factor protein
HSERO_RS13290		-1.0	-2.4	cobalt-precorrin-6A synthase
HSERO_RS18455		-1.0	-1.2	phosphoglycolate phosphatase
HSERO_RS05850		-1.0	-3.4	exodeoxyribonuclease VII large subunit
HSERO_RS02330		-1.0	-2.3	aspartate carbamoyltransferase
HSERO_RS11830		-1.0	-1.0	hypothetical protein
HSERO_RS21055		-1.0	-1.4	hypothetical protein
HSERO_RS18770		-1.0	-1.2	transcriptional regulator
HSERO_RS21540		-1.0	-1.2	alkyl hydroperoxide reductase subunit C
HSERO_RS09295		-1.0	-3.2	23S rRNA (guanosine-2'-O-)-methyltransferase
HSERO_RS08795		-1.0	-0.8	transcriptional regulator
HSERO_RS20825		-1.0	-1.3	ABC transporter permease
HSERO_RS09200		-1.0	-2.3	glutathione ABC transporter permease
HSERO_RS02145		-1.0	-0.6	ferritin
HSERO_RS16190		-1.0	-4.4	hypothetical protein
HSERO_RS19525		-1.0	-1.4	PTS sugar transporter subunit IIA
HSERO_RS00795		-1.0	-2.1	glycerol-3-phosphate dehydrogenase
HSERO_RS14960		-1.0	-1.7	Fis family transcriptional regulator
HSERO_RS16140		-1.0	-2.4	ADP-ribose pyrophosphatase
HSERO_RS21015		-1.0	-2.8	imidazole glycerol phosphate synthase
HSERO_RS06175		-1.0	-1.9	queuine tRNA-ribosyltransferase
HSERO_RS06355		-1.0	-1.7	2,4-diketo-3-deoxy-L-fuconate hydrolase (EC 3.7.1.26) (from data)
HSERO_RS04525		-1.0	-1.3	lysozyme
HSERO_RS23800		-1.0	-1.1	hypothetical protein
HSERO_RS02915		-1.0	-1.2	short-chain dehydrogenase
HSERO_RS09745		-0.9	-0.8	chemotaxis protein CheY
HSERO_RS21725		-0.9	-2.0	polyketide cyclase
HSERO_RS12140		-0.9	-1.6	5-deoxyglucuronate isomerase
HSERO_RS18550		-0.9	-0.9	excinuclease ATPase subunit
HSERO_RS04155		-0.9	-0.7	hypothetical protein
HSERO_RS07275		-0.9	-1.2	D-amino acid dehydrogenase
HSERO_RS23760		-0.9	-2.0	hypothetical protein
HSERO_RS22420		-0.9	-1.6	azoreductase
HSERO_RS14585		-0.9	-3.0	hypothetical protein
HSERO_RS21075		-0.9	-2.9	asparagine synthase
HSERO_RS02735		-0.9	-0.8	hypothetical protein
HSERO_RS17345		-0.9	-2.4	AsnC family transcriptional regulator
HSERO_RS00450		-0.9	-1.5	phosphoenolpyruvate-protein phosphotransferase
HSERO_RS19090		-0.9	-1.0	C4-dicarboxylate ABC transporter
HSERO_RS04105		-0.9	-2.5	hypothetical protein
HSERO_RS10685		-0.9	-1.8	serine endopeptidase

Specific Phenotypes

For 2 genes in this experiment