Experiment set13IT084 for Sinorhizobium meliloti 1021

Compare to:

Parafilmed volatile agar plate with Trichoderma atroviridae IMI

200 most detrimental genes:

  gene name fitness t score description  
SMc00150 +3.9 35.4 hypothetical protein compare
SM_b20613 +3.3 20.3 C4-dicarboxylate transport transcriptional regulator compare
SMc02367 +3.0 17.9 sensor histidine kinase transmembrane protein compare
SMc02366 +2.9 18.9 transcriptional regulator compare
SMc00067 +2.9 13.9 outer-membranne lipoprotein compare
SMc01099 +2.7 5.8 tRNA pseudouridine synthase A compare
SMc01222 +2.6 11.4 lipopolysaccharide core biosynthesis glycosyl transferase compare
SMc00295 +2.6 2.7 hypothetical protein compare
SMc01595 +2.5 5.8 sensor histidine kinase transmembrane protein compare
SMc01120 +2.2 5.6 hypothetical protein compare
SMc04094 +2.2 5.7 hypothetical protein compare
SMc00838 +2.2 11.3 hypothetical protein compare
SMc01024 +2.2 3.0 preprotein translocase subunit SecG compare
SMc02434 +2.2 2.5 hypothetical protein compare
SMa0222 +2.1 2.9 GntR family transcriptional regulator compare
SMc02137 +2.1 6.3 ornithine carbamoyltransferase compare
SMc01907 +2.0 15.2 hypothetical protein compare
SMc01858 +2.0 2.9 S-adenosyl-methyltransferase MraW compare
SMc02112 +2.0 7.2 hypothetical protein compare
SMc01440 +1.9 5.2 hydrolase serine protease transmembrane protein compare
SMc00361 +1.9 5.3 hypothetical protein compare
SMc03111 +1.9 8.7 mannose 6-phosphate isomerase (EC 5.3.1.8) (from data) compare
SMc03826 +1.9 2.3 argininosuccinate synthase compare
SMc04454 +1.8 6.8 ABC transporter ATP-binding protein compare
SM_b20948 +1.8 1.9 glucosyltransferase compare
SMc03900 +1.8 13.4 cyclic beta-1,2-glucan ABc transporter compare
SMa5033 +1.7 1.6 hypothetical protein compare
SM_b21491 +1.7 7.3 hypothetical protein compare
SMc04382 +1.7 14.9 beta-(1,2)-glucan production associated transmembrane protein compare
SMc02713 +1.6 2.2 RNA polymerase sigma-E factor (sigma-24) protein compare
SMc01223 +1.6 2.1 transcriptional regulator compare
SMc00353 +1.6 2.5 transmembrane protein compare
SMc02659 +1.6 4.8 GTP pyrophosphokinase (ATP:GTP 3'-pyrophosphotransferase) protein compare
SMc00522 +1.6 11.1 ATP-dependent RNA helicase compare
SMc04001 +1.6 1.8 phosphoribosylaminoimidazole carboxylase catalytic subunit protein compare
SMc00061 +1.6 3.6 hypothetical protein compare
SMa1658 +1.5 2.2 hypothetical protein compare
SMc00320 +1.5 3.7 ribosome-binding factor A compare
SMa0126 +1.5 2.0 CspA8 Cold shock family protein compare
SMc03153 +1.4 5.6 keto-hydroxyglutarate-aldolase/keto-deoxy- phosphogluconate aldolase compare
SMc04043 +1.4 5.8 hypothetical protein compare
SMc01107 +1.4 6.8 hypothetical protein compare
SMa1017 +1.4 1.3 hypothetical protein compare
SMc03229 +1.4 1.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
SMa5021 +1.4 3.1 hypothetical protein compare
SM_b20387 +1.4 1.4 transcriptional regulator compare
SMc00339 +1.3 7.2 adenylate cyclase compare
SMc03855 +1.3 3.2 hypothetical protein compare
SMc01441 +1.3 5.3 membrane bound protease compare
SMa1174 +1.3 1.5 hypothetical protein compare
SMc00588 +1.2 1.5 L-arabinose 1-dehydrogenase; D-galactose 1-dehydrogenase (EC 1.1.1.46; EC 1.1.1.48) (from data) compare
SMc04220 +1.2 1.4 transcriptional regulator compare
SMc01698 +1.2 6.4 oxidoreductase compare
SMc00618 +1.2 8.2 polyphosphate kinase compare
SMc00349 +1.2 5.2 GTP-binding protein LepA compare
SMc03880 +1.2 5.6 hypothetical protein compare
SMc00976 +1.2 1.7 enoyl-CoA hydratase compare
SMc04000 +1.2 4.6 hypothetical protein compare
SMa1361 +1.2 1.7 hypothetical protein compare
SM_b20021 +1.2 0.9 transcriptional regulator compare
SMc01933 +1.2 1.6 hypothetical protein compare
SM_b21266 +1.2 3.7 hypothetical protein compare
SM_b21192 +1.2 6.7 fructose-1,6-bisphosphate aldolase compare
SMa0834 +1.2 4.7 FdxB ferredoxin III compare
SM_b21002 +1.2 3.1 methionine aminopeptidase compare
SMc02714 +1.1 1.9 hypothetical protein compare
SMc00973 +1.1 1.8 hypothetical protein compare
SM_b20043 +1.1 6.1 hypothetical protein compare
SM_b20123 +1.1 2.9 transcriptional regulator compare
SM_b20261 +1.1 1.3 malate dehydrogenase compare
SMc03069 +1.1 1.8 6-phosphogluconolactonase compare
SMc00134 +1.1 5.3 hypothetical protein compare
SM_b21374 +1.1 1.4 tagatose kinase (EC 2.7.1.101) (from data) compare
SMc03795 +1.1 1.6 isopropylmalate isomerase small subunit compare
SMc00482 +1.0 4.3 hypothetical protein compare
SMc01131 +1.0 2.1 hypothetical protein compare
SM_b21669 +1.0 2.4 hypothetical protein compare
SM_b21397 +1.0 2.0 hypothetical protein compare
SMc02886 +1.0 2.8 signal peptide protein compare
SMc00726 +1.0 0.5 thiol:disulfide interchange redox-active center transmembrane protein compare
SM_b21252 +1.0 6.1 glycosyltransferase compare
SMc00012 +1.0 0.8 cytochrome C oxidase assembly protein compare
SMc02365 +1.0 3.4 protease precursor protein compare
SMc03889 +1.0 3.5 transporter compare
SMa2289 +1.0 0.9 hypothetical protein compare
SM_b21265 +1.0 5.2 glycosyltransferase compare
SMc03961 +1.0 4.6 sulfolipid (UDP-sulfoquinovose) biosynthesis protein compare
SM_b20302 +1.0 1.7 hypothetical protein compare
SMc02029 +1.0 3.4 peptide ABC transporter permease compare
SMa5036 +1.0 2.6 hypothetical protein compare
SM_b21442 +1.0 3.0 hypothetical protein compare
SM_b21695 +0.9 2.5 hypothetical protein compare
SM_b21253 +0.9 3.5 hypothetical protein compare
SM_b20684 +0.9 7.3 hypothetical protein compare
SMc01244 +0.9 2.4 tRNA-Ala compare
SM_b20333 +0.9 6.4 transporter protein compare
SMc04242 +0.9 1.2 zinc uptake regulation protein compare
SMc02121 +0.9 1.0 ABC transporter for L-Glutamine, L-Histidine, and other L-amino acids, ATPase component (from data) compare
SM_b21261 +0.9 6.6 mureinpeptideoligopeptide ABC transporter substrate-binding protein precursor compare
SM_b21441 +0.9 1.9 inosine-5'-monophosphate dehydrogenase compare
SMc00555 +0.9 1.0 colicin V production transmembrane protein compare
SMa0647 +0.9 1.7 hypothetical protein compare
SMc01439 +0.9 3.7 hypothetical protein compare
SM_b21176 +0.9 3.3 phosphate uptake ABC transporter substrate-binding protein precursor compare
SMa0063 +0.9 2.6 GntR family transcriptional regulator compare
SM_b21256 +0.9 4.6 nucleotide sugar oxidase compare
SMc00788 +0.9 1.6 peptide ABC transporter permease compare
SMc01346 +0.9 1.1 leucyl/phenylalanyl-tRNA--protein transferase compare
SMc00501 +0.9 4.0 hypothetical protein compare
SMa2029 +0.9 1.7 amidohydrolase compare
SMc01515 +0.9 1.5 hypothetical protein compare
SMc00513 +0.9 2.8 amino acid-binding periplasmic protein compare
SMc01991 +0.8 1.0 short chain dehydrogenase compare
SMc02107 +0.8 0.8 hypothetical protein compare
SMa1367 +0.8 1.9 short chain alcohol dehydrogenase-related dehydrogenase compare
SMc01613 +0.8 2.6 ribose-5-phosphate isomerase B compare
SMc02521 +0.8 2.5 glycerol-3-phosphate regulon repressor transcription regulator protein compare
SMa0106 +0.8 2.1 ABC transporter permease compare
SM_b20139 +0.8 2.9 hypothetical protein compare
SMc04457 +0.8 1.8 hypothetical protein compare
SM_b21268 +0.8 3.3 hypothetical protein compare
SMc00176 +0.8 3.3 hypothetical protein compare
SMa1120 +0.8 3.4 ABC transporter ATP-binding protein compare
SMc02980 +0.8 1.1 hypothetical protein compare
SMa0748 +0.8 1.0 MucR family transcriptional regulator compare
SMa1365 +0.8 1.0 ATP-binding protein compare
SMc00877 +0.8 3.5 transcriptional regulator compare
SMc00099 +0.8 1.2 alkylphosphonate uptake protein compare
SMc00554 +0.8 2.3 amidophosphoribosyltransferase compare
SMc02449 +0.8 2.4 acetyltransferase compare
SMc01468 +0.8 1.7 chemotaxis protein compare
SMc00761 +0.8 5.3 oxidoreductase compare
SMc00856 +0.8 0.6 hypothetical protein compare
SM_b21170 +0.8 3.5 guanylate kinase compare
SM_b20145 +0.8 1.1 hypothetical protein compare
SM_b22001 +0.8 1.3 hypothetical protein compare
SMa2168 +0.8 0.8 tRNA-Met compare
SM_b20540 +0.8 0.9 hypothetical protein compare
SM_b20312 +0.8 3.6 dihydroxyacetone kinase compare
SMc03123 +0.8 5.8 transcriptional regulator compare
SMc02142 +0.8 2.5 phosphate transporter ATP-binding protein compare
SMc00174 +0.8 4.5 hypothetical protein compare
SM_b20882 +0.8 1.1 hypothetical protein compare
SMc03250 +0.8 2.2 hypothetical protein compare
SM_b20221 +0.8 2.7 epoxide hydrolase compare
SM_b20746 +0.8 0.9 hypothetical protein compare
SMc00083 +0.8 2.8 hypothetical protein compare
SMc02593 +0.8 1.0 hypothetical protein compare
SMc02503 +0.8 2.9 hypothetical protein compare
SM_b21258 +0.8 1.6 adenylate cyclase compare
SM_b21547 +0.8 1.4 hypothetical protein compare
SM_b21177 +0.8 2.7 phosphate uptake ABC transporter ATP-binding protein compare
SMa0736 +0.8 1.3 hypothetical protein compare
SM_b20372 +0.8 2.4 hypothetical protein compare
SMc04381 +0.8 3.5 hypothetical protein compare
SMa0833 +0.8 1.0 hypothetical protein compare
SMc00412 +0.7 1.7 orotidine 5'-phosphate decarboxylase compare
SMc04337 +0.7 2.2 hypothetical protein compare
SMc01769 +0.7 4.9 hypothetical protein compare
SMc00131 +0.7 4.7 transcriptional regulator compare
SMc03963 +0.7 3.4 sulfolipid biosynthesis protein compare
SMc02141 +0.7 1.0 phosphate transporter PhoU compare
SMa2317 +0.7 1.4 hypothetical protein compare
SMc04174 +0.7 0.6 signal peptide protein compare
SMc01363 +0.7 0.8 hypothetical protein compare
SMc02245 +0.7 2.8 dihydroorotate dehydrogenase 2 compare
SMa2023 +0.7 2.6 hypothetical protein compare
SMc01172 +0.7 2.7 thiosulfate sulfurtransferase compare
SMc00194 +0.7 1.7 hypothetical protein compare
SM_b21452 +0.7 1.3 hypothetical protein compare
SM_b20866 +0.7 2.2 hypothetical protein compare
SM_b20580 +0.7 1.3 LysR family transcriptional regulator compare
SMc04166 +0.7 1.6 hypothetical protein compare
SMc00175 +0.7 2.4 ABC transporter ATP-binding protein compare
SMc04081 +0.7 3.3 glycosyl transferase (sulfolipid biosynthesis) protein compare
SM_b21029 +0.7 1.5 hypothetical protein compare
SM_b20595 +0.7 2.2 cell division protein FtsK compare
SMa1158 +0.7 0.9 hypothetical protein compare
SM_b20398 +0.7 1.3 hypothetical protein compare
SMc01957 +0.7 2.6 hypothetical protein compare
SM_b20260 +0.7 1.0 hypothetical protein compare
SMc00764 +0.7 2.5 hypothetical protein compare
SMa0659 +0.7 0.9 cytochrome c binding protein, carboxyl terminus compare
SM_b21639 +0.7 3.0 phenylacetate-CoA oxygenase subunit PaaB compare
SMc01705 +0.7 1.3 hypothetical protein compare
SMc02904 +0.7 1.3 hypothetical protein compare
SMc03871 +0.7 1.5 ABC transporter ATP-binding protein compare
SMa1924 +0.7 0.6 hypothetical protein compare
SMc04213 +0.7 1.3 diacylglycerol kinase compare
SMc01852 +0.7 3.3 pyrophosphate--fructose-6-phosphate 1-phosphotransferase compare
SMc01801 +0.7 1.7 N-acetylglutamylphosphate reductase (EC 1.2.1.38) (from data) compare
SMc04161 +0.7 1.6 hypothetical protein compare
SM_b20280 +0.7 1.6 hypothetical protein compare
SMc00075 +0.7 2.3 ribosomal-protein-alanine acetyltransferase compare
SMc04235 +0.7 2.6 tRNA-dihydrouridine synthase A compare
SMc02490 +0.7 3.1 hypothetical protein compare
SM_b20589 +0.7 1.5 beta-ketoadipyl CoA thiolase compare
SMc00790 +0.7 4.4 peptide ABC transporter ATP-binding protein compare
SMa1092 +0.7 1.1 hypothetical protein compare
SM_b20554 +0.7 3.0 hypothetical protein compare


Specific Phenotypes

For 6 genes in this experiment