Experiment set13IT084 for Pseudomonas fluorescens SBW25-INTG

Compare to:

L-Glutamine (C)(N); with TAPS

200 most important genes:

  gene name fitness t score description  
PFLU_RS28535 -4.8 -5.8 dihydroxy-acid dehydratase compare
PFLU_RS20565 -4.6 -7.6 3-isopropylmalate dehydrogenase compare
PFLU_RS20580 -4.4 -7.4 3-isopropylmalate dehydratase large subunit compare
PFLU_RS24765 -4.4 -19.0 2-isopropylmalate synthase compare
PFLU_RS23065 -4.3 -4.2 phosphate acyltransferase PlsX compare
PFLU_RS25640 -4.2 -8.5 ketol-acid reductoisomerase compare
PFLU_RS28390 -4.2 -9.3 methionine biosynthesis protein MetW compare
PFLU_RS28695 -4.1 -7.9 phosphoglycerate dehydrogenase compare
PFLU_RS20575 -4.0 -6.6 3-isopropylmalate dehydratase small subunit compare
PFLU_RS04465 -3.7 -9.1 ATP phosphoribosyltransferase compare
PFLU_RS20510 -3.6 -13.3 O-succinylhomoserine sulfhydrylase compare
PFLU_RS28165 -3.6 -10.8 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS28655 -3.6 -4.9 HAD family hydrolase compare
PFLU_RS28385 -3.5 -13.6 homoserine O-acetyltransferase compare
PFLU_RS04470 -3.2 -10.4 histidinol dehydrogenase compare
PFLU_RS01605 -3.1 -6.3 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS27365 -3.0 -10.2 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS02590 -3.0 -9.6 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS01900 -3.0 -6.6 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS22630 -3.0 -16.7 phosphoenolpyruvate synthase compare
PFLU_RS01620 -2.9 -5.9 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS02490 -2.9 -13.3 phosphoserine phosphatase SerB compare
PFLU_RS01995 -2.9 -9.9 malate dehydrogenase compare
PFLU_RS20515 -2.8 -3.3 amidophosphoribosyltransferase compare
PFLU_RS23070 -2.7 -1.7 50S ribosomal protein L32 compare
PFLU_RS09055 -2.5 -1.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS00180 -2.5 -7.2 tryptophan synthase subunit beta compare
PFLU_RS12450 -2.5 -8.8 cyclic peptide export ABC transporter compare
PFLU_RS00175 -2.5 -8.0 tryptophan synthase subunit alpha compare
PFLU_RS27370 -2.4 -11.7 anthranilate phosphoribosyltransferase compare
PFLU_RS20540 -2.4 -10.4 phosphoribosylanthranilate isomerase compare
PFLU_RS22070 -2.4 -3.5 phosphoribosylglycinamide formyltransferase compare
PFLU_RS22740 -2.3 -3.5 phosphoadenylyl-sulfate reductase compare
PFLU_RS26640 -2.3 -5.2 septal ring lytic transglycosylase RlpA family protein compare
PFLU_RS23920 -2.3 -2.7 septation protein A compare
PFLU_RS29515 -2.2 -10.2 RidA family protein compare
PFLU_RS01910 -2.2 -2.0 sterol-binding protein compare
PFLU_RS12975 -2.1 -4.2 DUF934 domain-containing protein compare
PFLU_RS13035 -2.0 -3.5 cobalamin biosynthesis protein CobW compare
PFLU_RS25750 -2.0 -3.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS21995 -2.0 -4.0 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PFLU_RS12980 -2.0 -8.1 nitrite/sulfite reductase compare
PFLU_RS07245 -2.0 -7.8 DegQ family serine endoprotease compare
PFLU_RS27650 -2.0 -7.2 biotin synthase BioB compare
PFLU_RS01610 -2.0 -9.3 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS07685 -2.0 -4.3 transcriptional repressor LexA compare
PFLU_RS01625 -1.9 -1.8 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS28195 -1.9 -8.0 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
PFLU_RS23380 -1.9 -1.7 HAD-IB family hydrolase compare
PFLU_RS23590 -1.9 -2.5 gluconokinase compare
PFLU_RS12445 -1.8 -11.3 TonB-dependent siderophore receptor compare
PFLU_RS02760 -1.8 -6.9 N-acylglucosamine 2-epimerase compare
PFLU_RS14805 -1.7 -2.5 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnF compare
PFLU_RS04315 -1.7 -3.2 rod shape-determining protein MreD compare
PFLU_RS00210 -1.7 -2.5 OsmC family protein compare
PFLU_RS18530 -1.7 -3.1 DNA translocase FtsK compare
PFLU_RS04015 -1.7 -2.4 1-phosphofructokinase compare
PFLU_RS27630 -1.6 -2.9 dethiobiotin synthase compare
PFLU_RS25735 -1.6 -2.5 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS01895 -1.6 -4.3 phosphoribosyl-ATP diphosphatase compare
PFLU_RS18505 -1.6 -7.5 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS03995 -1.6 -1.4 hypothetical protein compare
PFLU_RS23235 -1.6 -2.3 Arc family DNA-binding protein compare
PFLU_RS13540 -1.6 -2.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS29310 -1.6 -1.3 accessory factor UbiK family protein compare
PFLU_RS01485 -1.6 -10.2 cellulase compare
PFLU_RS18645 -1.6 -1.1 NADH-quinone oxidoreductase subunit NuoH compare
PFLU_RS29400 -1.6 -1.3 DUF1127 domain-containing protein compare
PFLU_RS22105 -1.5 -4.2 cysteine synthase CysM compare
PFLU_RS27645 -1.5 -7.2 8-amino-7-oxononanoate synthase compare
PFLU_RS16310 -1.5 -2.7 hypothetical protein compare
PFLU_RS25120 -1.5 -2.9 response regulator compare
PFLU_RS13350 -1.5 -1.6 ParD-like family protein compare
PFLU_RS24050 -1.5 -8.5 tol-pal system protein YbgF compare
PFLU_RS26735 -1.4 -5.9 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PFLU_RS02365 -1.4 -7.6 glycosyltransferase compare
PFLU_RS20335 -1.4 -2.0 hypothetical protein compare
PFLU_RS23730 -1.4 -9.1 MurR/RpiR family transcriptional regulator compare
PFLU_RS27635 -1.4 -4.5 malonyl-ACP O-methyltransferase BioC compare
PFLU_RS15410 -1.3 -1.8 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS09845 -1.3 -2.6 biotin carboxyl carrier domain-containing protein compare
PFLU_RS20290 -1.3 -1.4 integration host factor subunit alpha compare
PFLU_RS18615 -1.3 -1.2 NADH-quinone oxidoreductase subunit A compare
PFLU_RS19175 -1.3 -5.6 trigger factor compare
PFLU_RS13795 -1.3 -2.1 hypothetical protein compare
PFLU_RS22520 -1.2 -2.1 GntR family transcriptional regulator compare
PFLU_RS31290 -1.2 -1.7 EamA family transporter compare
PFLU_RS28650 -1.2 -4.2 RNA pyrophosphohydrolase compare
PFLU_RS13665 -1.2 -1.4 MarR family transcriptional regulator compare
PFLU_RS01955 -1.2 -5.0 DUF971 domain-containing protein compare
PFLU_RS23310 -1.2 -6.5 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS30725 -1.2 -2.9 DUF1652 domain-containing protein compare
PFLU_RS26290 -1.2 -0.9 2Fe-2S iron-sulfur cluster binding domain-containing protein compare
PFLU_RS13045 -1.2 -4.0 AAA domain-containing protein compare
PFLU_RS01660 -1.2 -2.3 rhodanese-like domain-containing protein compare
PFLU_RS29900 -1.2 -6.8 DNA helicase II compare
PFLU_RS29340 -1.2 -4.9 bifunctional diguanylate cyclase/phosphodiesterase compare
PFLU_RS03075 -1.2 -1.5 translation initiation factor Sui1 compare
PFLU_RS28965 -1.2 -6.1 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS11475 -1.1 -1.1 histidine kinase compare
PFLU_RS04220 -1.1 -5.7 FadR family transcriptional regulator compare
PFLU_RS08675 -1.1 -1.7 DsbE family thiol:disulfide interchange protein compare
PFLU_RS17340 -1.1 -1.9 AAA family ATPase compare
PFLU_RS08660 -1.1 -1.3 heme exporter protein CcmD compare
PFLU_RS24485 -1.1 -5.9 hypothetical protein compare
PFLU_RS21645 -1.1 -5.3 chemotaxis protein CheA compare
PFLU_RS09480 -1.1 -2.0 hypothetical protein compare
PFLU_RS08410 -1.1 -4.8 HTH-type transcriptional regulator CysB compare
PFLU_RS24025 -1.1 -6.3 quinolinate synthase NadA compare
PFLU_RS29560 -1.1 -1.2 hypothetical protein compare
PFLU_RS24085 -1.1 -0.7 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS02670 -1.0 -2.5 hypothetical protein compare
PFLU_RS13015 -1.0 -3.7 precorrin-4 C(11)-methyltransferase compare
PFLU_RS22600 -1.0 -0.7 RNA polymerase sigma factor SigX compare
PFLU_RS11980 -1.0 -3.7 precorrin-6A synthase (deacetylating) compare
PFLU_RS30865 -1.0 -2.4 transposase compare
PFLU_RS01670 -1.0 -4.8 protein-export chaperone SecB compare
PFLU_RS25790 -1.0 -4.0 polyribonucleotide nucleotidyltransferase compare
PFLU_RS22400 -1.0 -2.7 adenine phosphoribosyltransferase compare
PFLU_RS30165 -1.0 -4.8 ParA family protein compare
PFLU_RS07540 -1.0 -1.9 class II glutamine amidotransferase compare
PFLU_RS04430 -1.0 -4.1 ATP-binding cassette domain-containing protein compare
PFLU_RS24125 -1.0 -2.2 cold-shock protein compare
PFLU_RS28645 -1.0 -6.9 phosphoenolpyruvate--protein phosphotransferase compare
PFLU_RS21740 -1.0 -3.8 Hpt domain-containing protein compare
PFLU_RS19160 -1.0 -5.0 endopeptidase La compare
PFLU_RS01960 -1.0 -0.9 ATP-dependent protease ATPase subunit HslU compare
PFLU_RS08160 -1.0 -3.4 sugar transferase compare
PFLU_RS24825 -1.0 -1.6 Fe-S cluster assembly protein IscX compare
PFLU_RS12660 -1.0 -3.7 hypothetical protein compare
PFLU_RS04780 -1.0 -1.8 hypothetical protein compare
PFLU_RS25740 -1.0 -3.5 polynucleotide adenylyltransferase PcnB compare
PFLU_RS22010 -1.0 -3.8 threonine-phosphate decarboxylase compare
PFLU_RS26485 -0.9 -2.5 hypothetical protein compare
PFLU_RS01645 -0.9 -5.5 S41 family peptidase compare
PFLU_RS06620 -0.9 -2.6 DUF2282 domain-containing protein compare
PFLU_RS03770 -0.9 -5.9 sulfate adenylyltransferase subunit CysN compare
PFLU_RS15065 -0.9 -3.1 IclR family transcriptional regulator compare
PFLU_RS29550 -0.9 -3.0 ATP-dependent DNA helicase RecG compare
PFLU_RS01005 -0.9 -0.9 ABC transporter ATP-binding protein compare
PFLU_RS30105 -0.9 -2.5 DeoR family transcriptional regulator compare
PFLU_RS00750 -0.9 -2.7 poly-beta-1,6-N-acetyl-D-glucosamine biosynthesis protein PgaD compare
PFLU_RS09960 -0.9 -2.3 DUF1232 domain-containing protein compare
PFLU_RS18805 -0.9 -2.4 ABC transporter ATP-binding protein compare
PFLU_RS25210 -0.9 -2.6 cytochrome o ubiquinol oxidase subunit III compare
PFLU_RS22095 -0.9 -7.0 GTP diphosphokinase compare
PFLU_RS22025 -0.9 -6.1 cobyrinate a,c-diamide synthase compare
PFLU_RS17815 -0.9 -2.0 response regulator compare
PFLU_RS12175 -0.9 -0.6 methyl-accepting chemotaxis protein compare
PFLU_RS24090 -0.9 -0.6 Holliday junction branch migration protein RuvA compare
PFLU_RS13900 -0.9 -2.2 hypothetical protein compare
PFLU_RS02325 -0.8 -2.6 ATP-binding cassette domain-containing protein compare
PFLU_RS22770 -0.8 -2.4 DUF2784 domain-containing protein compare
PFLU_RS03970 -0.8 -4.3 carboxylating nicotinate-nucleotide diphosphorylase compare
PFLU_RS20520 -0.8 -4.5 colicin V production protein CvpA compare
PFLU_RS13050 -0.8 -2.6 VWA domain-containing protein compare
PFLU_RS02975 -0.8 -3.6 precorrin-3B synthase compare
PFLU_RS23445 -0.8 -1.7 DUF1003 domain-containing protein compare
PFLU_RS07780 -0.8 -2.6 hypothetical protein compare
PFLU_RS31275 -0.8 -1.0 hypothetical protein compare
PFLU_RS02625 -0.8 -5.2 ribonuclease R compare
PFLU_RS03535 -0.8 -1.9 YscO family type III secretion system apparatus protein compare
PFLU_RS06205 -0.8 -1.8 cold-shock protein compare
PFLU_RS05020 -0.8 -1.2 DUF1120 domain-containing protein compare
PFLU_RS19420 -0.8 -3.2 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS18780 -0.8 -2.8 NAD(P)-binding protein compare
PFLU_RS21520 -0.8 -2.4 thioesterase compare
PFLU_RS09670 -0.8 -1.3 integrating conjugative element protein compare
PFLU_RS05305 -0.8 -2.2 protease inhibitor I42 family protein compare
PFLU_RS25220 -0.8 -3.5 ubiquinol oxidase subunit II compare
PFLU_RS13040 -0.8 -5.5 cobaltochelatase subunit CobN compare
PFLU_RS14820 -0.8 -2.2 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
PFLU_RS20765 -0.8 -1.6 hypothetical protein compare
PFLU_RS14500 -0.8 -2.8 hypothetical protein compare
PFLU_RS18395 -0.8 -1.2 MotA/TolQ/ExbB proton channel family protein compare
PFLU_RS21990 -0.8 -3.3 alpha-ribazole phosphatase family protein compare
PFLU_RS15265 -0.8 -2.7 EAL domain-containing response regulator compare
PFLU_RS15790 -0.8 -2.6 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
PFLU_RS08105 -0.8 -4.0 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS11025 -0.8 -2.1 hypothetical protein compare
PFLU_RS00530 -0.8 -1.4 DUF2388 domain-containing protein compare
PFLU_RS27380 -0.8 -5.8 anthranilate synthase component I compare
PFLU_RS17490 -0.8 -2.8 glutaminase B compare
PFLU_RS29750 -0.8 -2.8 phosphate signaling complex protein PhoU compare
PFLU_RS22015 -0.8 -4.4 cobalamin biosynthesis protein compare
PFLU_RS03645 -0.8 -4.7 tetratricopeptide repeat protein compare
PFLU_RS04435 -0.8 -2.8 lipid asymmetry maintenance ABC transporter permease subunit MlaE compare
PFLU_RS15725 -0.8 -3.5 siderophore-iron reductase FhuF compare
PFLU_RS05610 -0.8 -3.0 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS00245 -0.8 -3.3 YheV family putative metal-binding protein compare
PFLU_RS18670 -0.7 -0.7 NADH-quinone oxidoreductase subunit M compare
PFLU_RS14005 -0.7 -1.3 hypothetical protein compare
PFLU_RS03665 -0.7 -2.2 molybdopterin-synthase adenylyltransferase MoeB compare
PFLU_RS13020 -0.7 -1.6 cobalamin biosynthesis protein compare
PFLU_RS17390 -0.7 -1.3 DUF4880 domain-containing protein compare
PFLU_RS18640 -0.7 -1.1 NADH-quinone oxidoreductase subunit NuoG compare
PFLU_RS24560 -0.7 -3.8 site-specific tyrosine recombinase XerD compare
PFLU_RS14045 -0.7 -1.3 hypothetical protein compare
PFLU_RS02580 -0.7 -3.8 FtsH protease activity modulator HflK compare
PFLU_RS01615 -0.7 -2.5 DUF2164 domain-containing protein compare


Specific Phenotypes

None in this experiment

For Pseudomonas fluorescens SBW25-INTG in no stress control experiments

For no stress control L-Glutamine across organisms