Experiment set13IT082 for Pseudomonas fluorescens SBW25-INTG

Compare to:

L-Glutamine (C)(N); with TAPS

200 most important genes:

  gene name fitness t score description  
PFLU_RS20575 -5.0 -4.9 3-isopropylmalate dehydratase small subunit compare
PFLU_RS28535 -4.8 -7.4 dihydroxy-acid dehydratase compare
PFLU_RS24765 -4.5 -17.7 2-isopropylmalate synthase compare
PFLU_RS20565 -4.4 -9.5 3-isopropylmalate dehydrogenase compare
PFLU_RS23065 -4.4 -3.1 phosphate acyltransferase PlsX compare
PFLU_RS20580 -4.3 -8.3 3-isopropylmalate dehydratase large subunit compare
PFLU_RS25640 -4.1 -9.7 ketol-acid reductoisomerase compare
PFLU_RS04465 -4.0 -8.6 ATP phosphoribosyltransferase compare
PFLU_RS27640 -3.9 -2.7 alpha/beta fold hydrolase compare
PFLU_RS28695 -3.7 -8.3 phosphoglycerate dehydrogenase compare
PFLU_RS28385 -3.6 -13.7 homoserine O-acetyltransferase compare
PFLU_RS20510 -3.5 -14.1 O-succinylhomoserine sulfhydrylase compare
PFLU_RS28655 -3.5 -6.4 HAD family hydrolase compare
PFLU_RS28390 -3.5 -11.0 methionine biosynthesis protein MetW compare
PFLU_RS01900 -3.1 -6.3 phosphoribosyl-AMP cyclohydrolase compare
PFLU_RS01995 -3.1 -9.1 malate dehydrogenase compare
PFLU_RS02590 -3.1 -10.2 ATP phosphoribosyltransferase regulatory subunit compare
PFLU_RS28165 -3.1 -12.3 methylenetetrahydrofolate reductase [NAD(P)H] compare
PFLU_RS01620 -3.0 -6.2 1-(5-phosphoribosyl)-5-[(5- phosphoribosylamino)methylideneamino]imidazole-4- carboxamide isomerase compare
PFLU_RS01605 -2.9 -6.7 imidazoleglycerol-phosphate dehydratase HisB compare
PFLU_RS22630 -2.8 -16.5 phosphoenolpyruvate synthase compare
PFLU_RS20515 -2.8 -3.7 amidophosphoribosyltransferase compare
PFLU_RS02490 -2.7 -13.2 phosphoserine phosphatase SerB compare
PFLU_RS23070 -2.7 -1.7 50S ribosomal protein L32 compare
PFLU_RS02760 -2.7 -9.8 N-acylglucosamine 2-epimerase compare
PFLU_RS12450 -2.7 -8.0 cyclic peptide export ABC transporter compare
PFLU_RS00175 -2.6 -8.5 tryptophan synthase subunit alpha compare
PFLU_RS09055 -2.5 -1.7 NAD(P)H-dependent glycerol-3-phosphate dehydrogenase compare
PFLU_RS22520 -2.5 -2.9 GntR family transcriptional regulator compare
PFLU_RS01625 -2.5 -1.7 imidazole glycerol phosphate synthase subunit HisF compare
PFLU_RS20540 -2.4 -11.1 phosphoribosylanthranilate isomerase compare
PFLU_RS26640 -2.4 -5.3 septal ring lytic transglycosylase RlpA family protein compare
PFLU_RS04470 -2.3 -10.6 histidinol dehydrogenase compare
PFLU_RS25750 -2.0 -3.8 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
PFLU_RS00180 -2.0 -7.2 tryptophan synthase subunit beta compare
PFLU_RS01610 -2.0 -9.2 imidazole glycerol phosphate synthase subunit HisH compare
PFLU_RS21995 -2.0 -4.1 nicotinate-nucleotide--dimethylbenzimidazole phosphoribosyltransferase compare
PFLU_RS08410 -2.0 -8.0 HTH-type transcriptional regulator CysB compare
PFLU_RS26290 -2.0 -1.3 2Fe-2S iron-sulfur cluster binding domain-containing protein compare
PFLU_RS13370 -1.9 -1.5 DUF2790 domain-containing protein compare
PFLU_RS01895 -1.9 -5.6 phosphoribosyl-ATP diphosphatase compare
PFLU_RS27370 -1.9 -10.3 anthranilate phosphoribosyltransferase compare
PFLU_RS27650 -1.9 -7.4 biotin synthase BioB compare
PFLU_RS22740 -1.9 -3.9 phosphoadenylyl-sulfate reductase compare
PFLU_RS22070 -1.9 -3.3 phosphoribosylglycinamide formyltransferase compare
PFLU_RS07245 -1.9 -7.5 DegQ family serine endoprotease compare
PFLU_RS17950 -1.8 -2.4 hypothetical protein compare
PFLU_RS12445 -1.8 -11.1 TonB-dependent siderophore receptor compare
PFLU_RS20290 -1.8 -2.0 integration host factor subunit alpha compare
PFLU_RS27365 -1.8 -6.1 indole-3-glycerol phosphate synthase TrpC compare
PFLU_RS12980 -1.7 -7.5 nitrite/sulfite reductase compare
PFLU_RS02980 -1.7 -1.8 precorrin-8X methylmutase compare
PFLU_RS19555 -1.6 -2.0 histidine phosphatase family protein compare
PFLU_RS18530 -1.6 -3.5 DNA translocase FtsK compare
PFLU_RS28195 -1.6 -7.4 adenosylmethionine--8-amino-7-oxononanoate transaminase compare
PFLU_RS18645 -1.6 -1.1 NADH-quinone oxidoreductase subunit NuoH compare
PFLU_RS06205 -1.6 -3.4 cold-shock protein compare
PFLU_RS13350 -1.6 -2.3 ParD-like family protein compare
PFLU_RS22105 -1.6 -4.3 cysteine synthase CysM compare
PFLU_RS24825 -1.6 -3.8 Fe-S cluster assembly protein IscX compare
PFLU_RS25735 -1.6 -3.1 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS04315 -1.6 -2.7 rod shape-determining protein MreD compare
PFLU_RS13540 -1.6 -2.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS01955 -1.5 -5.7 DUF971 domain-containing protein compare
PFLU_RS18505 -1.5 -7.4 uroporphyrinogen-III C-methyltransferase compare
PFLU_RS31800 -1.5 -1.7 hypothetical protein compare
PFLU_RS11475 -1.5 -1.4 histidine kinase compare
PFLU_RS25645 -1.5 -2.4 acetolactate synthase small subunit compare
PFLU_RS00070 -1.5 -2.8 tetratricopeptide repeat protein compare
PFLU_RS27645 -1.4 -6.8 8-amino-7-oxononanoate synthase compare
PFLU_RS03535 -1.4 -2.9 YscO family type III secretion system apparatus protein compare
PFLU_RS01485 -1.4 -9.0 cellulase compare
PFLU_RS12975 -1.4 -3.6 DUF934 domain-containing protein compare
PFLU_RS02365 -1.4 -7.6 glycosyltransferase compare
PFLU_RS29515 -1.4 -7.6 RidA family protein compare
PFLU_RS25740 -1.4 -4.4 polynucleotide adenylyltransferase PcnB compare
PFLU_RS09535 -1.4 -1.7 TIGR03750 family conjugal transfer protein compare
PFLU_RS23235 -1.4 -2.8 Arc family DNA-binding protein compare
PFLU_RS07860 -1.3 -3.0 hypothetical protein compare
PFLU_RS13010 -1.3 -3.3 Fe-S biogenesis protein NfuA compare
PFLU_RS31510 -1.3 -1.5 transcriptional regulator compare
PFLU_RS18615 -1.3 -1.2 NADH-quinone oxidoreductase subunit A compare
PFLU_RS15410 -1.3 -1.8 zinc-dependent alcohol dehydrogenase family protein compare
PFLU_RS27630 -1.3 -2.7 dethiobiotin synthase compare
PFLU_RS17390 -1.3 -2.8 DUF4880 domain-containing protein compare
PFLU_RS13035 -1.3 -2.5 cobalamin biosynthesis protein CobW compare
PFLU_RS18820 -1.2 -2.7 acyl-CoA dehydrogenase compare
PFLU_RS08160 -1.2 -4.4 sugar transferase compare
PFLU_RS02990 -1.2 -3.6 precorrin-3B C(17)-methyltransferase compare
PFLU_RS30345 -1.2 -2.6 DUF2559 family protein compare
PFLU_RS02115 -1.2 -2.2 outer membrane lipoprotein carrier protein LolA compare
PFLU_RS13580 -1.2 -3.2 ribonucleotide-diphosphate reductase subunit beta compare
PFLU_RS22195 -1.2 -2.8 DEAD/DEAH box helicase compare
PFLU_RS01670 -1.2 -5.3 protein-export chaperone SecB compare
PFLU_RS05250 -1.2 -2.2 elongation factor 4 compare
PFLU_RS07685 -1.2 -3.2 transcriptional repressor LexA compare
PFLU_RS05910 -1.2 -2.0 response regulator transcription factor compare
PFLU_RS21495 -1.1 -1.7 TlpA family protein disulfide reductase compare
PFLU_RS08650 -1.1 -1.0 heme exporter protein CcmB compare
PFLU_RS13045 -1.1 -3.8 AAA domain-containing protein compare
PFLU_RS06855 -1.1 -1.8 helix-turn-helix transcriptional regulator compare
PFLU_RS05690 -1.1 -1.4 Grx4 family monothiol glutaredoxin compare
PFLU_RS24125 -1.1 -2.6 cold-shock protein compare
PFLU_RS13105 -1.1 -2.4 nuclear transport factor 2 family protein compare
PFLU_RS27635 -1.0 -3.9 malonyl-ACP O-methyltransferase BioC compare
PFLU_RS30105 -1.0 -2.8 DeoR family transcriptional regulator compare
PFLU_RS02690 -1.0 -1.7 hypothetical protein compare
PFLU_RS19420 -1.0 -3.6 sigma-70 family RNA polymerase sigma factor compare
PFLU_RS26735 -1.0 -4.8 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
PFLU_RS14210 -1.0 -2.1 TetR/AcrR family transcriptional regulator compare
PFLU_RS11980 -1.0 -4.2 precorrin-6A synthase (deacetylating) compare
PFLU_RS03100 -1.0 -1.7 hypothetical protein compare
PFLU_RS24050 -1.0 -6.2 tol-pal system protein YbgF compare
PFLU_RS19175 -1.0 -4.9 trigger factor compare
PFLU_RS24085 -1.0 -1.0 Holliday junction branch migration DNA helicase RuvB compare
PFLU_RS13750 -1.0 -1.4 hypothetical protein compare
PFLU_RS28650 -1.0 -3.8 RNA pyrophosphohydrolase compare
PFLU_RS06555 -1.0 -6.1 OmpA family protein compare
PFLU_RS20390 -1.0 -2.1 DUF1654 domain-containing protein compare
PFLU_RS29550 -1.0 -3.2 ATP-dependent DNA helicase RecG compare
PFLU_RS00695 -1.0 -1.4 DUF2789 domain-containing protein compare
PFLU_RS23730 -1.0 -6.5 MurR/RpiR family transcriptional regulator compare
PFLU_RS16285 -1.0 -2.8 hypothetical protein compare
PFLU_RS03665 -1.0 -3.1 molybdopterin-synthase adenylyltransferase MoeB compare
PFLU_RS01645 -1.0 -6.2 S41 family peptidase compare
PFLU_RS07645 -1.0 -2.9 hypothetical protein compare
PFLU_RS04165 -1.0 -3.0 cell division protein ZapE compare
PFLU_RS01315 -1.0 -1.8 Hsp33 family molecular chaperone HslO compare
PFLU_RS28965 -1.0 -5.0 5-formyltetrahydrofolate cyclo-ligase compare
PFLU_RS23220 -1.0 -2.1 tRNA-Arg compare
PFLU_RS04220 -1.0 -5.2 FadR family transcriptional regulator compare
PFLU_RS20970 -1.0 -1.3 phytanoyl-CoA dioxygenase family protein compare
PFLU_RS03645 -1.0 -5.9 tetratricopeptide repeat protein compare
PFLU_RS28645 -1.0 -6.2 phosphoenolpyruvate--protein phosphotransferase compare
PFLU_RS12715 -1.0 -1.4 fumarylacetoacetate hydrolase family protein compare
PFLU_RS02670 -1.0 -2.5 hypothetical protein compare
PFLU_RS21925 -1.0 -2.5 YecA family protein compare
PFLU_RS19160 -1.0 -5.0 endopeptidase La compare
PFLU_RS08185 -1.0 -4.5 DegT/DnrJ/EryC1/StrS aminotransferase family protein compare
PFLU_RS00210 -0.9 -1.0 OsmC family protein compare
PFLU_RS10835 -0.9 -2.0 enoyl-CoA hydratase/isomerase family protein compare
PFLU_RS02455 -0.9 -1.4 3',5'-cyclic-AMP phosphodiesterase compare
PFLU_RS16310 -0.9 -1.9 hypothetical protein compare
PFLU_RS21425 -0.9 -2.9 lipid A biosynthesis lauroyl acyltransferase compare
PFLU_RS03770 -0.9 -5.5 sulfate adenylyltransferase subunit CysN compare
PFLU_RS31425 -0.9 -1.2 hypothetical protein compare
PFLU_RS02565 -0.9 -2.0 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
PFLU_RS23185 -0.9 -5.8 protein-glutamate O-methyltransferase CheR compare
PFLU_RS31305 -0.9 -2.8 cell wall hydrolase compare
PFLU_RS22030 -0.9 -2.1 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
PFLU_RS29340 -0.9 -4.3 bifunctional diguanylate cyclase/phosphodiesterase compare
PFLU_RS15610 -0.9 -2.5 helix-turn-helix transcriptional regulator compare
PFLU_RS07695 -0.9 -2.0 beta-N-acetylhexosaminidase compare
PFLU_RS13015 -0.9 -3.2 precorrin-4 C(11)-methyltransferase compare
PFLU_RS22025 -0.9 -6.3 cobyrinate a,c-diamide synthase compare
PFLU_RS21580 -0.9 -1.6 MOSC domain-containing protein compare
PFLU_RS04070 -0.9 -1.1 peptide chain release factor 3 compare
PFLU_RS29560 -0.9 -1.3 hypothetical protein compare
PFLU_RS30510 -0.9 -2.4 glycosyltransferase family 4 protein compare
PFLU_RS02585 -0.9 -2.8 protease modulator HflC compare
PFLU_RS31530 -0.8 -0.7 transposase compare
PFLU_RS31590 -0.8 -1.1 hypothetical protein compare
PFLU_RS20845 -0.8 -1.7 hypothetical protein compare
PFLU_RS05050 -0.8 -1.9 response regulator transcription factor compare
PFLU_RS03575 -0.8 -1.7 hypothetical protein compare
PFLU_RS01615 -0.8 -2.4 DUF2164 domain-containing protein compare
PFLU_RS05655 -0.8 -2.4 DeoR/GlpR family transcriptional regulator compare
PFLU_RS22725 -0.8 -1.6 transcriptional regulator compare
PFLU_RS17580 -0.8 -1.1 repressor LexA compare
PFLU_RS17920 -0.8 -1.0 acyltransferase compare
PFLU_RS01020 -0.8 -1.8 LysR family transcriptional regulator compare
PFLU_RS25730 -0.8 -5.7 PAS domain S-box protein compare
PFLU_RS22250 -0.8 -1.3 hypothetical protein compare
PFLU_RS07525 -0.8 -1.0 cyclic nucleotide-binding domain-containing protein compare
PFLU_RS22005 -0.8 -4.7 cobyric acid synthase compare
PFLU_RS12800 -0.8 -1.3 amino acid ABC transporter ATP-binding protein compare
PFLU_RS28450 -0.8 -1.5 cell division ATP-binding protein FtsE compare
PFLU_RS24485 -0.8 -4.2 hypothetical protein compare
PFLU_RS20770 -0.8 -2.2 membrane protein compare
PFLU_RS08105 -0.8 -4.2 bifunctional prephenate dehydrogenase/3-phosphoshikimate 1-carboxyvinyltransferase compare
PFLU_RS19580 -0.8 -1.7 helix-turn-helix transcriptional regulator compare
PFLU_RS04430 -0.8 -3.4 ATP-binding cassette domain-containing protein compare
PFLU_RS18670 -0.8 -0.7 NADH-quinone oxidoreductase subunit M compare
PFLU_RS15005 -0.8 -1.6 hypothetical protein compare
PFLU_RS14830 -0.8 -3.6 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
PFLU_RS06235 -0.8 -2.6 SufE family protein compare
PFLU_RS13150 -0.8 -2.3 hypothetical protein compare
PFLU_RS23310 -0.8 -4.5 arginine/ornithine succinyltransferase subunit alpha compare
PFLU_RS18655 -0.8 -0.5 NADH-quinone oxidoreductase subunit J compare
PFLU_RS15045 -0.8 -2.6 glycosyl hydrolase compare
PFLU_RS06055 -0.8 -1.3 chemotaxis response regulator protein-glutamate methylesterase compare
PFLU_RS07275 -0.8 -1.6 4-hydroxy-tetrahydrodipicolinate synthase compare
PFLU_RS07565 -0.8 -3.6 biotin-dependent carboxyltransferase compare
PFLU_RS13040 -0.8 -5.4 cobaltochelatase subunit CobN compare
PFLU_RS22000 -0.8 -3.7 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
PFLU_RS22095 -0.8 -6.1 GTP diphosphokinase compare
PFLU_RS01095 -0.8 -2.0 ribbon-helix-helix protein, CopG family compare
PFLU_RS08675 -0.8 -1.6 DsbE family thiol:disulfide interchange protein compare
PFLU_RS02975 -0.7 -3.6 precorrin-3B synthase compare
PFLU_RS20520 -0.7 -4.3 colicin V production protein CvpA compare


Specific Phenotypes

None in this experiment

For Pseudomonas fluorescens SBW25-INTG in no stress control experiments

For no stress control L-Glutamine across organisms