Experiment set13IT082 for Pseudomonas fluorescens SBW25-INTG

Compare to:

L-Glutamine (C)(N); with TAPS

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS00415 +2.5 5.9 thiol:disulfide interchange protein DsbA/DsbL compare
PFLU_RS21795 +2.1 19.7 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS21695 +1.5 7.6 flagellar biosynthesis protein FlhB compare
PFLU_RS21860 +1.5 9.4 flagellar basal body rod protein FlgF compare
PFLU_RS23175 +1.4 7.8 flagellar basal body rod protein FlgC compare
PFLU_RS01475 +1.4 12.5 UDP-forming cellulose synthase catalytic subunit compare
PFLU_RS01490 +1.3 12.4 cellulose biosynthesis protein BcsC compare
PFLU_RS03075 +1.3 2.0 translation initiation factor Sui1 compare
PFLU_RS21855 +1.3 9.6 flagellar basal-body rod protein FlgG compare
PFLU_RS23195 +1.3 11.5 flagellar basal body P-ring formation protein FlgA compare
PFLU_RS23180 +1.3 8.9 flagellar basal body rod protein FlgB compare
PFLU_RS01480 +1.3 12.0 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB compare
PFLU_RS31010 +1.3 1.6 transposase compare
PFLU_RS14715 +1.3 9.5 protein-glutamate O-methyltransferase CheR compare
PFLU_RS21850 +1.3 10.8 flagellar basal body L-ring protein FlgH compare
PFLU_RS18725 +1.3 1.9 alpha/beta hydrolase compare
PFLU_RS13365 +1.3 1.9 hypothetical protein compare
PFLU_RS23205 +1.3 9.0 flagellar protein FlgN compare
PFLU_RS12650 +1.2 3.3 hypothetical protein compare
PFLU_RS23165 +1.2 11.0 flagellar hook protein FlgE compare
PFLU_RS21835 +1.2 10.5 flagellar hook-associated protein FlgK compare
PFLU_RS21735 +1.2 8.8 flagellar hook-length control protein FliK compare
PFLU_RS21660 +1.2 9.8 RNA polymerase sigma factor FliA compare
PFLU_RS21360 +1.2 1.4 MarR family transcriptional regulator compare
PFLU_RS08660 +1.1 2.5 heme exporter protein CcmD compare
PFLU_RS26145 +1.1 1.2 hypothetical protein compare
PFLU_RS31440 +1.1 2.2 hypothetical protein compare
PFLU_RS27910 +1.1 1.6 helix-turn-helix transcriptional regulator compare
PFLU_RS28310 +1.1 1.7 response regulator compare
PFLU_RS05965 +1.1 1.7 hypothetical protein compare
PFLU_RS21830 +1.1 10.1 flagellar hook-associated protein 3 compare
PFLU_RS10765 +1.1 7.9 UvrY/SirA/GacA family response regulator transcription factor compare
PFLU_RS21810 +1.1 9.7 flagellar filament capping protein FliD compare
PFLU_RS02510 +1.1 8.7 flagellar motor stator protein MotA compare
PFLU_RS13315 +1.1 3.9 class I SAM-dependent methyltransferase compare
PFLU_RS21755 +1.0 7.6 flagella biosynthesis chaperone FliJ compare
PFLU_RS21845 +1.0 5.9 flagellar basal body P-ring protein FlgI compare
PFLU_RS21675 +1.0 8.4 flagellar biosynthesis protein FlhA compare
PFLU_RS01875 +1.0 1.1 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
PFLU_RS21765 +1.0 6.1 flagellar assembly protein FliH compare
PFLU_RS19165 +1.0 4.0 ATP-dependent Clp protease ATP-binding subunit ClpX compare
PFLU_RS26835 +1.0 3.0 exodeoxyribonuclease VII small subunit compare
PFLU_RS08575 +1.0 2.6 hypothetical protein compare
PFLU_RS01470 +1.0 6.4 cellulose synthase operon protein YhjQ compare
PFLU_RS31275 +1.0 1.4 hypothetical protein compare
PFLU_RS19730 +0.9 3.2 glyoxylate/hydroxypyruvate reductase A compare
PFLU_RS29505 +0.9 4.4 DNA-directed RNA polymerase subunit omega compare
PFLU_RS15810 +0.9 2.1 hypothetical protein compare
PFLU_RS21760 +0.9 7.6 flagellar protein export ATPase FliI compare
PFLU_RS14550 +0.9 5.0 UTP--glucose-1-phosphate uridylyltransferase GalU compare
PFLU_RS15200 +0.9 1.6 ABC transporter substrate-binding protein compare
PFLU_RS21840 +0.9 5.8 flagellar assembly peptidoglycan hydrolase FlgJ compare
PFLU_RS13715 +0.9 1.5 MmcQ/YjbR family DNA-binding protein compare
PFLU_RS18515 +0.9 2.6 fluoride efflux transporter CrcB compare
PFLU_RS09540 +0.9 2.5 TIGR03745 family integrating conjugative element membrane protein compare
PFLU_RS29555 +0.9 6.9 HDOD domain-containing protein compare
PFLU_RS13215 +0.9 2.8 LysR family transcriptional regulator compare
PFLU_RS14355 +0.9 2.8 DUF2388 domain-containing protein compare
PFLU_RS06430 +0.9 6.6 RNA polymerase sigma factor RpoS compare
PFLU_RS13605 +0.9 2.7 DUF4880 domain-containing protein compare
PFLU_RS13765 +0.9 1.9 hypothetical protein compare
PFLU_RS02515 +0.9 3.6 flagellar motor protein MotB compare
PFLU_RS02180 +0.8 1.5 thioredoxin TrxC compare
PFLU_RS21710 +0.8 5.2 flagellar type III secretion system pore protein FliP compare
PFLU_RS21805 +0.8 6.3 flagellar export chaperone FliS compare
PFLU_RS29065 +0.8 1.1 amino acid ABC transporter ATP-binding protein compare
PFLU_RS15310 +0.8 1.8 YgdI/YgdR family lipoprotein compare
PFLU_RS09500 +0.8 0.8 hypothetical protein compare
PFLU_RS14370 +0.8 2.6 hypothetical protein compare
PFLU_RS13085 +0.8 1.9 DUF1315 family protein compare
PFLU_RS21700 +0.8 5.0 flagellar type III secretion system protein FliR compare
PFLU_RS25760 +0.8 4.6 glucose-6-phosphate isomerase compare
PFLU_RS16250 +0.8 3.0 hypothetical protein compare
PFLU_RS31820 +0.8 2.5 MFS sugar transporter compare
PFLU_RS04780 +0.8 2.1 hypothetical protein compare
PFLU_RS28895 +0.8 1.7 DUF2388 domain-containing protein compare
PFLU_RS08165 +0.8 1.5 acyl carrier protein compare
PFLU_RS19015 +0.8 4.8 anti-sigma factor compare
PFLU_RS21705 +0.8 3.6 flagellar biosynthesis protein FliQ compare
PFLU_RS15985 +0.7 3.3 SDR family oxidoreductase compare
PFLU_RS22645 +0.7 6.1 EamA family transporter compare
PFLU_RS25190 +0.7 1.2 hypothetical protein compare
PFLU_RS22665 +0.7 2.7 alanyl-tRNA editing protein compare
PFLU_RS14205 +0.7 3.3 nuclear transport factor 2 family protein compare
PFLU_RS13895 +0.7 0.6 helix-turn-helix transcriptional regulator compare
PFLU_RS23445 +0.7 1.6 DUF1003 domain-containing protein compare
PFLU_RS17080 +0.7 2.2 FadR family transcriptional regulator compare
PFLU_RS20335 +0.7 1.4 hypothetical protein compare
PFLU_RS00310 +0.7 1.5 twin transmembrane helix small protein compare
PFLU_RS21730 +0.7 4.9 flagellar basal body-associated protein FliL compare
PFLU_RS03025 +0.7 3.9 tRNA dihydrouridine synthase DusB compare
PFLU_RS31545 +0.7 1.6 LysR family transcriptional regulator compare
PFLU_RS00520 +0.7 1.5 DUF2388 domain-containing protein compare
PFLU_RS10960 +0.7 2.2 transcriptional regulator LrhA compare
PFLU_RS17990 +0.7 2.8 ABC transporter substrate-binding protein compare
PFLU_RS21820 +0.7 5.2 flagellin compare
PFLU_RS07235 +0.7 2.2 sigma factor AlgU negative regulatory protein compare
PFLU_RS18410 +0.7 2.7 response regulator compare
PFLU_RS15990 +0.7 1.2 SDR family oxidoreductase compare
PFLU_RS01500 +0.7 2.1 cell division protein FtsQ compare
PFLU_RS04530 +0.7 1.7 hypothetical protein compare
PFLU_RS12710 +0.6 1.8 AbrB family transcriptional regulator compare
PFLU_RS16565 +0.6 2.2 hypothetical protein compare
PFLU_RS13885 +0.6 1.5 hypothetical protein compare
PFLU_RS12740 +0.6 1.1 BcpO-related WXXGXW repeat protein compare
PFLU_RS22185 +0.6 2.4 hypothetical protein compare
PFLU_RS14810 +0.6 1.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
PFLU_RS07380 +0.6 3.3 LysR family transcriptional regulator compare
PFLU_RS18370 +0.6 3.2 low molecular weight phosphotyrosine protein phosphatase compare
PFLU_RS22380 +0.6 3.7 sulfite exporter TauE/SafE family protein compare
PFLU_RS17595 +0.6 2.9 GDP-mannose pyrophosphatase compare
PFLU_RS21670 +0.6 4.3 flagellar biosynthesis protein FlhF compare
PFLU_RS31445 +0.6 2.1 colicin immunity protein compare
PFLU_RS19875 +0.6 1.7 amino acid ABC transporter ATP-binding protein compare
PFLU_RS18005 +0.6 1.2 acyl-CoA/acyl-ACP dehydrogenase compare
PFLU_RS21725 +0.6 3.8 flagellar motor switch protein FliM compare
PFLU_RS31670 +0.6 2.8 hypothetical protein compare
PFLU_RS14005 +0.6 1.7 hypothetical protein compare
PFLU_RS15800 +0.6 1.7 immunity 49 family protein compare
PFLU_RS13640 +0.6 1.5 isochorismatase family protein compare
PFLU_RS30650 +0.6 2.8 DNA-binding protein compare
PFLU_RS17370 +0.6 1.9 hypothetical protein compare
PFLU_RS10980 +0.6 2.2 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
PFLU_RS31470 +0.6 1.8 hypothetical protein compare
PFLU_RS12230 +0.6 2.3 carboxymuconolactone decarboxylase family protein compare
PFLU_RS14505 +0.6 2.7 bifunctional DNA-binding transcriptional regulator/O6-methylguanine-DNA methyltransferase Ada compare
PFLU_RS17750 +0.6 1.5 pirin family protein compare
PFLU_RS16595 +0.6 1.9 hypothetical protein compare
PFLU_RS09495 +0.6 1.4 helix-turn-helix transcriptional regulator compare
PFLU_RS05020 +0.6 0.5 DUF1120 domain-containing protein compare
PFLU_RS19900 +0.6 1.6 general secretion pathway protein GspM compare
PFLU_RS21665 +0.6 2.4 MinD/ParA family protein compare
PFLU_RS14545 +0.6 1.1 hypothetical protein compare
PFLU_RS27695 +0.6 3.9 CBS domain-containing protein compare
PFLU_RS20955 +0.6 1.2 DUF1028 domain-containing protein compare
PFLU_RS24130 +0.6 2.2 protein SlyX compare
PFLU_RS25955 +0.6 1.0 hypothetical protein compare
PFLU_RS21775 +0.5 3.9 flagellar basal body M-ring protein FliF compare
PFLU_RS22535 +0.5 4.4 D-alanyl-D-alanine carboxypeptidase/D-alanyl-D-alanine-endopeptidase compare
PFLU_RS27580 +0.5 1.5 pyrroloquinoline quinone biosynthesis peptide chaperone PqqD compare
PFLU_RS16445 +0.5 1.9 PIG-L family deacetylase compare
PFLU_RS21910 +0.5 4.6 BamA/TamA family outer membrane protein compare
PFLU_RS01680 +0.5 2.8 hypothetical protein compare
PFLU_RS00040 +0.5 4.4 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PFLU_RS25325 +0.5 2.7 HopJ type III effector protein compare
PFLU_RS23810 +0.5 1.5 hypothetical protein compare
PFLU_RS00850 +0.5 1.7 hypothetical protein compare
PFLU_RS05795 +0.5 2.7 phage baseplate assembly protein V compare
PFLU_RS03055 +0.5 1.6 methyl-accepting chemotaxis protein compare
PFLU_RS31180 +0.5 2.5 YqaE/Pmp3 family membrane protein compare
PFLU_RS24670 +0.5 1.2 HigA family addiction module antidote protein compare
PFLU_RS28990 +0.5 4.0 flagellar basal body-associated protein FliL compare
PFLU_RS02410 +0.5 1.9 multidrug efflux SMR transporter compare
PFLU_RS30590 +0.5 1.0 hypothetical protein compare
PFLU_RS00410 +0.5 3.7 cytochrome c4 compare
PFLU_RS16055 +0.5 1.6 GntR family transcriptional regulator compare
PFLU_RS23170 +0.5 3.0 flagellar hook assembly protein FlgD compare
PFLU_RS04975 +0.5 2.1 amino acid ABC transporter ATP-binding protein compare
PFLU_RS04490 +0.5 1.8 hypoxanthine-guanine phosphoribosyltransferase compare
PFLU_RS14690 +0.5 2.0 hypothetical protein compare
PFLU_RS01170 +0.5 2.7 ABC transporter permease compare
PFLU_RS21655 +0.5 2.7 response regulator compare
PFLU_RS01660 +0.5 1.1 rhodanese-like domain-containing protein compare
PFLU_RS16785 +0.5 1.2 GAF domain-containing protein compare
PFLU_RS15920 +0.5 2.5 4-hydroxyphenylacetate isomerase compare
PFLU_RS16685 +0.5 2.8 AMP-binding protein compare
PFLU_RS15755 +0.5 1.1 type II secretion system protein M compare
PFLU_RS00435 +0.5 4.2 PAS domain-containing protein compare
PFLU_RS10660 +0.5 1.4 DUF1652 domain-containing protein compare
PFLU_RS02130 +0.5 1.0 glycosyl transferase compare
PFLU_RS11760 +0.5 1.6 GlxA family transcriptional regulator compare
PFLU_RS09880 +0.5 2.6 short-chain fatty acid transporter compare
PFLU_RS02255 +0.5 2.7 23S rRNA (adenine(2030)-N(6))-methyltransferase RlmJ compare
PFLU_RS30480 +0.5 1.8 hypothetical protein compare
PFLU_RS28910 +0.5 3.2 glycine cleavage system protein GcvH compare
PFLU_RS30730 +0.5 1.0 helix-turn-helix domain-containing protein compare
PFLU_RS11185 +0.5 2.6 mandelate racemase compare
PFLU_RS31825 +0.5 1.7 hypothetical protein compare
PFLU_RS21770 +0.5 3.2 flagellar motor switch protein FliG compare
PFLU_RS13775 +0.5 1.9 hypothetical protein compare
PFLU_RS22040 +0.5 2.8 NlpC/P60 family protein compare
PFLU_RS13090 +0.5 2.0 DUF2797 domain-containing protein compare
PFLU_RS13850 +0.5 1.6 hypothetical protein compare
PFLU_RS21600 +0.5 1.2 response regulator transcription factor compare
PFLU_RS21790 +0.5 2.7 PAS domain-containing protein compare
PFLU_RS29255 +0.5 1.9 iron donor protein CyaY compare
PFLU_RS25920 +0.5 1.2 outer membrane protein assembly factor BamE compare
PFLU_RS15050 +0.5 1.8 SDR family oxidoreductase compare
PFLU_RS16030 +0.5 2.3 aldehyde dehydrogenase family protein compare
PFLU_RS25135 +0.5 1.4 hypothetical protein compare
PFLU_RS24970 +0.5 2.1 chemoreceptor glutamine deamidase CheD compare
PFLU_RS13930 +0.5 2.6 hypothetical protein compare
PFLU_RS02095 +0.5 1.8 hypothetical protein compare
PFLU_RS25390 +0.5 2.2 hypothetical protein compare
PFLU_RS20705 +0.5 2.3 hypothetical protein compare
PFLU_RS20110 +0.5 2.2 Lrp/AsnC family transcriptional regulator compare
PFLU_RS10355 +0.5 1.5 DeoR family transcriptional regulator compare
PFLU_RS28250 +0.5 1.2 malonate decarboxylase holo-ACP synthase compare
PFLU_RS29950 +0.5 1.8 GTP-binding protein compare
PFLU_RS28480 +0.5 2.3 sulfurtransferase compare


Specific Phenotypes

None in this experiment

For Pseudomonas fluorescens SBW25-INTG in no stress control experiments

For no stress control L-Glutamine across organisms