Experiment set13IT066 for Klebsiella michiganensis M5al

Compare to:

LB 1x with Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS24600 -5.8 -2.9 dihydroxyacetone kinase compare
BWI76_RS26460 -5.6 -3.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.7 -2.0 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS08520 -4.2 -2.1 colicin transporter TolQ compare
BWI76_RS01095 -4.1 -2.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS08535 -3.9 -2.0 translocation protein TolB compare
BWI76_RS21070 -3.8 -1.9 outer membrane protein assembly factor BamB compare
BWI76_RS09645 -3.7 -1.1 thioredoxin-disulfide reductase compare
BWI76_RS23265 -3.6 -1.9 hypothetical protein compare
BWI76_RS21310 -3.4 -1.0 DNA repair protein RecO compare
BWI76_RS04160 -3.3 -3.8 phosphoserine phosphatase compare
BWI76_RS19840 -3.2 -1.3 hypothetical protein compare
BWI76_RS06535 -3.1 -2.1 endopeptidase La compare
BWI76_RS08525 -3.0 -2.9 colicin transporter compare
BWI76_RS10745 -3.0 -1.2 hypothetical protein compare
BWI76_RS12070 -3.0 -1.5 hypothetical protein compare
BWI76_RS06680 -2.9 -1.5 hypothetical protein compare
BWI76_RS24765 -2.6 -4.3 membrane protein compare
BWI76_RS24580 -2.6 -3.5 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS08210 -2.5 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS07730 -2.5 -1.0 iron-enterobactin transporter membrane protein compare
BWI76_RS01210 -2.4 -1.2 tyrosine recombinase XerC compare
BWI76_RS25335 -2.4 -2.0 stringent starvation protein A compare
BWI76_RS00875 -2.4 -5.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS17190 -2.4 -2.5 TonB system transport protein TonB compare
BWI76_RS24900 -2.3 -1.3 DeoR family transcriptional regulator compare
BWI76_RS09760 -2.3 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS16965 -2.2 -2.0 murein lipoprotein compare
BWI76_RS05260 -2.2 -1.1 chaperone compare
BWI76_RS17980 -2.2 -5.8 RNA chaperone ProQ compare
BWI76_RS00400 -2.2 -1.1 glutamine synthetase compare
BWI76_RS27440 -2.1 -1.5 DNA helicase RecG compare
BWI76_RS21345 -2.1 -2.5 sigma-E factor regulatory protein RseB compare
BWI76_RS09730 -2.1 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS24275 -2.1 -2.2 biopolymer transport protein ExbD compare
BWI76_RS17720 -2.1 -0.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS15110 -2.1 -4.5 putative excinuclease ABC subunit A compare
BWI76_RS08530 -2.1 -1.3 protein TolA compare
BWI76_RS00345 -2.0 -3.8 protein disulfide oxidoreductase DsbA compare
BWI76_RS13820 -2.0 -1.7 hypothetical protein compare
BWI76_RS01220 -2.0 -4.3 DNA-dependent helicase II compare
BWI76_RS00240 -2.0 -1.1 FMN-binding protein MioC compare
BWI76_RS21780 -1.9 -3.8 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS07510 -1.9 -1.8 hypothetical protein compare
BWI76_RS11255 -1.9 -1.9 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS05120 -1.8 -6.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS22755 -1.8 -3.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS24850 -1.8 -4.3 DeoR family transcriptional regulator compare
BWI76_RS09755 -1.8 -2.1 phosphoserine transaminase compare
BWI76_RS12145 -1.8 -1.9 hypothetical protein compare
BWI76_RS14065 -1.7 -2.0 hypothetical protein compare
BWI76_RS01065 -1.7 -3.6 ATP-dependent RNA helicase RhlB compare
BWI76_RS20720 -1.7 -1.4 hypothetical protein compare
BWI76_RS21350 -1.7 -1.0 anti-RNA polymerase sigma factor SigE compare
BWI76_RS26390 -1.7 -6.2 cell division protein FtsX compare
BWI76_RS22690 -1.7 -2.0 adenylyl-sulfate kinase compare
BWI76_RS01350 -1.6 -0.6 NAD(P)H-flavin reductase compare
BWI76_RS03665 -1.6 -2.5 ABC transporter ATP-binding protein compare
BWI76_RS16920 -1.6 -1.3 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS15215 -1.6 -1.1 N-acetyltransferase compare
BWI76_RS21580 -1.6 -0.8 SsrA-binding protein compare
BWI76_RS01800 -1.6 -2.3 glucose-6-phosphate isomerase compare
BWI76_RS22765 -1.6 -6.6 sulfite reductase subunit alpha compare
BWI76_RS24605 -1.6 -5.0 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS15115 -1.6 -1.1 MFS transporter compare
BWI76_RS02530 -1.5 -1.0 tRNA dimethylallyltransferase compare
BWI76_RS19010 -1.5 -2.1 polysaccharide pyruvyl transferase yvff compare
BWI76_RS21370 -1.5 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS23490 -1.5 -3.6 fimbrial protein compare
BWI76_RS22805 -1.5 -6.3 GTP diphosphokinase compare
BWI76_RS09825 -1.5 -3.8 envelope biogenesis factor ElyC compare
BWI76_RS12265 -1.5 -6.0 hypothetical protein compare
BWI76_RS12750 -1.5 -2.8 hypothetical protein compare
BWI76_RS15690 -1.4 -3.0 hypothetical protein compare
BWI76_RS23690 -1.4 -1.7 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS01115 -1.4 -2.2 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS18470 -1.4 -1.9 hypothetical protein compare
BWI76_RS09970 -1.4 -1.2 porin OmpA compare
BWI76_RS08405 -1.4 -2.0 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS12205 -1.4 -1.8 hypothetical protein compare
BWI76_RS15635 -1.4 -2.4 hypothetical protein compare
BWI76_RS13920 -1.4 -5.7 magnesium-translocating P-type ATPase compare
BWI76_RS12380 -1.4 -4.1 DNA polymerase V subunit UmuD compare
BWI76_RS11435 -1.4 -2.0 hypothetical protein compare
BWI76_RS02340 -1.4 -3.3 membrane protein FxsA compare
BWI76_RS23365 -1.4 -3.2 LysR family transcriptional regulator compare
BWI76_RS12320 -1.4 -4.5 hypothetical protein compare
BWI76_RS26075 -1.4 -1.3 DNA adenine methylase compare
BWI76_RS12270 -1.3 -3.1 hypothetical protein compare
BWI76_RS00355 -1.3 -1.5 DNA polymerase I compare
BWI76_RS07185 -1.3 -1.1 hypothetical protein compare
BWI76_RS08605 -1.3 -1.5 phosphoglyceromutase compare
BWI76_RS12340 -1.3 -2.9 molecular chaperone Tir compare
BWI76_RS25700 -1.3 -5.9 heavy metal-responsive transcriptional regulator compare
BWI76_RS17975 -1.3 -1.5 tail-specific protease compare
BWI76_RS05235 -1.3 -1.0 hypothetical protein compare
BWI76_RS26175 -1.3 -2.1 DeoR/GlpR family transcriptional regulator compare
BWI76_RS12225 -1.3 -2.4 hypothetical protein compare
BWI76_RS12230 -1.2 -5.8 hypothetical protein compare
BWI76_RS21450 -1.2 -1.5 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS00180 -1.2 -0.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS00765 -1.2 -2.7 DNA-binding transcriptional regulator CytR compare
BWI76_RS00715 -1.2 -1.3 two-component sensor histidine kinase compare
BWI76_RS22450 -1.2 -2.0 selenoprotein W-related protein compare
BWI76_RS19670 -1.2 -1.8 S-formylglutathione hydrolase compare
BWI76_RS06775 -1.2 -7.1 multidrug efflux RND transporter permease subunit compare
BWI76_RS26730 -1.2 -4.5 inner membrane protein YhjD compare
BWI76_RS21680 -1.2 -2.7 antitoxin of the YeeV-YeeU toxin-antitoxin system compare
BWI76_RS21260 -1.2 -3.4 two-component sensor histidine kinase compare
BWI76_RS24280 -1.2 -2.2 biopolymer transporter ExbB compare
BWI76_RS01240 -1.2 -4.9 phospholipase A compare
BWI76_RS04530 -1.1 -0.9 peptidylprolyl isomerase SurA compare
BWI76_RS12790 -1.1 -0.9 lactate dehydrogenase compare
BWI76_RS24400 -1.1 -2.8 outer membrane channel protein TolC compare
BWI76_RS05015 -1.1 -1.0 transcriptional regulator compare
BWI76_RS12260 -1.1 -4.2 hypothetical protein compare
BWI76_RS01200 -1.1 -0.7 diaminopimelate epimerase compare
BWI76_RS15680 -1.1 -2.5 hypothetical protein compare
BWI76_RS06290 -1.1 -1.2 ACP phosphodiesterase compare
BWI76_RS08750 -1.1 -1.1 kinase inhibitor compare
BWI76_RS12200 -1.1 -2.3 hypothetical protein compare
BWI76_RS05810 -1.1 -0.9 hypothetical protein compare
BWI76_RS03655 -1.1 -3.1 hypothetical protein compare
BWI76_RS20640 -1.1 -3.0 cysteine synthase A compare
BWI76_RS22430 -1.1 -1.7 manganese/iron transporter ATP-binding protein compare
BWI76_RS04705 -1.1 -2.3 DNA-binding transcriptional regulator FruR compare
BWI76_RS00755 -1.1 -2.1 ATP-dependent protease subunit HslV compare
BWI76_RS12495 -1.1 -0.8 2-Cys peroxiredoxin compare
BWI76_RS12300 -1.1 -3.3 hypothetical protein compare
BWI76_RS12185 -1.1 -2.6 hypothetical protein compare
BWI76_RS07115 -1.1 -3.8 hypothetical protein compare
BWI76_RS03080 -1.1 -3.4 (Fe-S)-cluster assembly protein compare
BWI76_RS09190 -1.1 -1.8 hypothetical protein compare
BWI76_RS13585 -1.1 -1.5 4-oxalocrotonate tautomerase compare
BWI76_RS25920 -1.1 -0.9 peptidylprolyl isomerase compare
BWI76_RS22840 -1.1 -1.3 transposase compare
BWI76_RS12250 -1.0 -5.2 terminase compare
BWI76_RS19860 -1.0 -2.5 hypothetical protein compare
BWI76_RS22485 -1.0 -2.4 hypothetical protein compare
BWI76_RS12275 -1.0 -4.6 hypothetical protein compare
BWI76_RS23520 -1.0 -1.3 hypothetical protein compare
BWI76_RS14390 -1.0 -1.2 hypothetical protein compare
BWI76_RS15600 -1.0 -2.1 hypothetical protein compare
BWI76_RS11300 -1.0 -0.7 cupin compare
BWI76_RS00080 -1.0 -1.7 N-acetylmannosamine kinase compare
BWI76_RS11900 -1.0 -0.8 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS06780 -1.0 -3.6 MexE family multidrug efflux RND transporter periplasmic adaptor subunit compare
BWI76_RS12155 -1.0 -2.2 hypothetical protein compare
BWI76_RS15575 -1.0 -2.1 hypothetical protein compare
BWI76_RS00795 -1.0 -1.8 carboxymuconolactone decarboxylase compare
BWI76_RS12245 -1.0 -5.2 hypothetical protein compare
BWI76_RS19200 -1.0 -2.4 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS00940 -1.0 -2.0 transcriptional regulator HdfR compare
BWI76_RS12255 -1.0 -5.5 hypothetical protein compare
BWI76_RS15660 -1.0 -1.3 hypothetical protein compare
BWI76_RS14980 -1.0 -1.4 hypothetical protein compare
BWI76_RS01870 -1.0 -1.6 diacylglycerol kinase compare
BWI76_RS10930 -1.0 -4.4 glucan biosynthesis protein G compare
BWI76_RS08040 -1.0 -1.5 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS15740 -1.0 -1.8 HNH endonuclease compare
BWI76_RS15695 -1.0 -2.9 hypothetical protein compare
BWI76_RS15515 -1.0 -5.4 hypothetical protein compare
BWI76_RS12670 -1.0 -1.2 DNA polymerase V subunit UmuD compare
BWI76_RS10350 -1.0 -3.4 EamA family transporter compare
BWI76_RS11015 -1.0 -1.6 hypothetical protein compare
BWI76_RS15560 -1.0 -5.2 hypothetical protein compare
BWI76_RS02775 -1.0 -3.1 outer membrane protein assembly factor compare
BWI76_RS12325 -1.0 -6.0 hypothetical protein compare
BWI76_RS20565 -1.0 -1.2 hypothetical protein compare
BWI76_RS09305 -1.0 -1.5 hypothetical protein compare
BWI76_RS20750 -0.9 -0.6 carboxysome structural protein EutK compare
BWI76_RS13715 -0.9 -1.6 2-chlorobenzoate 1 2-dioxygenase electron transfer subunit compare
BWI76_RS12335 -0.9 -3.8 hypothetical protein compare
BWI76_RS04645 -0.9 -1.5 3-dehydroquinase compare
BWI76_RS20155 -0.9 -0.8 NADH-quinone oxidoreductase subunit I compare
BWI76_RS04955 -0.9 -1.1 hypoxanthine phosphoribosyltransferase compare
BWI76_RS08110 -0.9 -2.3 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS12305 -0.9 -3.7 hypothetical protein compare
BWI76_RS14305 -0.9 -1.7 metallophosphoesterase compare
BWI76_RS12220 -0.9 -4.0 hypothetical protein compare
BWI76_RS02735 -0.9 -1.8 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS01795 -0.9 -1.9 hypothetical protein compare
BWI76_RS19460 -0.9 -1.2 lipoprotein compare
BWI76_RS09150 -0.9 -2.8 DNA-binding transcriptional repressor DeoR compare
BWI76_RS15350 -0.9 -0.6 hypothetical protein compare
BWI76_RS19935 -0.9 -1.1 hypothetical protein compare
BWI76_RS07465 -0.9 -0.8 TetR family transcriptional regulator compare
BWI76_RS23900 -0.9 -2.2 hypothetical protein compare
BWI76_RS18390 -0.9 -1.3 hypothetical protein compare
BWI76_RS03595 -0.9 -1.3 ethanolamine utilization protein EutM compare
BWI76_RS12295 -0.9 -3.8 hypothetical protein compare
BWI76_RS15705 -0.9 -2.9 putative holin protein compare
BWI76_RS27225 -0.9 -0.9 rhodanese-like domain-containing protein compare
BWI76_RS12240 -0.9 -2.3 terminase small subunit compare
BWI76_RS05450 -0.9 -0.5 ribonuclease HI compare
BWI76_RS26125 -0.9 -3.5 carboxypeptidase/penicillin-binding protein 1A compare
BWI76_RS18230 -0.9 -1.8 trehalose-6-phosphate synthase compare
BWI76_RS12125 -0.9 -1.7 hypothetical protein compare
BWI76_RS17805 -0.9 -0.9 membrane protein compare
BWI76_RS18000 -0.9 -1.7 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare


Specific Phenotypes

For 2 genes in this experiment

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma virens G41 spores at 2.5*10^4 spores/mL across organisms