Experiment set13IT058 for Pseudomonas fluorescens SBW25-INTG

Compare to:

Glucose (C) and Ammonium chloride (N); with TAPS

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS14715 +1.6 11.1 protein-glutamate O-methyltransferase CheR compare
PFLU_RS14440 +1.4 2.2 hypothetical protein compare
PFLU_RS27910 +1.3 2.4 helix-turn-helix transcriptional regulator compare
PFLU_RS21795 +1.2 10.8 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS23195 +1.1 9.6 flagellar basal body P-ring formation protein FlgA compare
PFLU_RS21695 +1.1 6.9 flagellar biosynthesis protein FlhB compare
PFLU_RS21860 +1.1 7.5 flagellar basal body rod protein FlgF compare
PFLU_RS23180 +1.1 7.8 flagellar basal body rod protein FlgB compare
PFLU_RS21780 +1.1 5.5 flagellar hook-basal body complex protein FliE compare
PFLU_RS13845 +1.1 3.3 hypothetical protein compare
PFLU_RS01875 +1.1 1.9 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
PFLU_RS30030 +1.0 1.9 membrane protein compare
PFLU_RS21770 +1.0 6.0 flagellar motor switch protein FliG compare
PFLU_RS21855 +1.0 7.3 flagellar basal-body rod protein FlgG compare
PFLU_RS21675 +1.0 9.1 flagellar biosynthesis protein FlhA compare
PFLU_RS23175 +1.0 5.3 flagellar basal body rod protein FlgC compare
PFLU_RS21850 +1.0 8.5 flagellar basal body L-ring protein FlgH compare
PFLU_RS21710 +1.0 6.3 flagellar type III secretion system pore protein FliP compare
PFLU_RS12650 +1.0 1.9 hypothetical protein compare
PFLU_RS00460 +1.0 7.6 glutamate/aspartate:proton symporter GltP compare
PFLU_RS11380 +1.0 1.9 sarcosine oxidase subunit delta compare
PFLU_RS21760 +1.0 7.7 flagellar protein export ATPase FliI compare
PFLU_RS23165 +1.0 9.0 flagellar hook protein FlgE compare
PFLU_RS21705 +1.0 5.4 flagellar biosynthesis protein FliQ compare
PFLU_RS21735 +1.0 7.3 flagellar hook-length control protein FliK compare
PFLU_RS18000 +1.0 1.9 AhpC/TSA family protein compare
PFLU_RS13370 +0.9 1.0 DUF2790 domain-containing protein compare
PFLU_RS21775 +0.9 7.1 flagellar basal body M-ring protein FliF compare
PFLU_RS21755 +0.9 6.7 flagella biosynthesis chaperone FliJ compare
PFLU_RS09500 +0.9 1.5 hypothetical protein compare
PFLU_RS21660 +0.9 7.3 RNA polymerase sigma factor FliA compare
PFLU_RS23205 +0.9 6.7 flagellar protein FlgN compare
PFLU_RS21700 +0.9 5.2 flagellar type III secretion system protein FliR compare
PFLU_RS18410 +0.9 4.0 response regulator compare
PFLU_RS29810 +0.9 6.4 LysR family transcriptional regulator compare
PFLU_RS29065 +0.9 1.3 amino acid ABC transporter ATP-binding protein compare
PFLU_RS29360 +0.9 1.6 cytochrome c5 family protein compare
PFLU_RS29480 +0.9 6.3 exodeoxyribonuclease III compare
PFLU_RS21765 +0.8 5.2 flagellar assembly protein FliH compare
PFLU_RS10765 +0.8 6.2 UvrY/SirA/GacA family response regulator transcription factor compare
PFLU_RS21840 +0.8 5.6 flagellar assembly peptidoglycan hydrolase FlgJ compare
PFLU_RS28080 +0.8 3.1 hypothetical protein compare
PFLU_RS13610 +0.8 2.8 ABC transporter ATP-binding protein compare
PFLU_RS12260 +0.8 1.6 hypothetical protein compare
PFLU_RS24305 +0.8 2.7 antibiotic biosynthesis monooxygenase compare
PFLU_RS21725 +0.8 6.1 flagellar motor switch protein FliM compare
PFLU_RS19745 +0.8 3.1 acetylornithine deacetylase compare
PFLU_RS02510 +0.8 6.7 flagellar motor stator protein MotA compare
PFLU_RS21835 +0.8 6.8 flagellar hook-associated protein FlgK compare
PFLU_RS21830 +0.8 7.1 flagellar hook-associated protein 3 compare
PFLU_RS05890 +0.8 0.8 recombination regulator RecX compare
PFLU_RS17990 +0.8 3.2 ABC transporter substrate-binding protein compare
PFLU_RS21845 +0.7 4.7 flagellar basal body P-ring protein FlgI compare
PFLU_RS10310 +0.7 4.0 SDR family oxidoreductase compare
PFLU_RS00040 +0.7 6.1 1-acyl-sn-glycerol-3-phosphate acyltransferase compare
PFLU_RS07540 +0.7 2.2 class II glutamine amidotransferase compare
PFLU_RS21810 +0.7 6.5 flagellar filament capping protein FliD compare
PFLU_RS25865 +0.7 1.8 YhbY family RNA-binding protein compare
PFLU_RS31820 +0.7 2.9 MFS sugar transporter compare
PFLU_RS00070 +0.7 1.7 tetratricopeptide repeat protein compare
PFLU_RS10595 +0.7 1.7 hypothetical protein compare
PFLU_RS04530 +0.7 1.9 hypothetical protein compare
PFLU_RS13025 +0.7 3.5 CbtA family protein compare
PFLU_RS15745 +0.7 1.6 type II secretion system ATPase GspE compare
PFLU_RS02515 +0.7 2.9 flagellar motor protein MotB compare
PFLU_RS08060 +0.7 2.5 YciK family oxidoreductase compare
PFLU_RS08350 +0.7 1.4 ABC transporter ATP-binding protein compare
PFLU_RS17615 +0.7 1.2 DeoR/GlpR transcriptional regulator compare
PFLU_RS03585 +0.7 1.4 hypothetical protein compare
PFLU_RS13750 +0.7 1.1 hypothetical protein compare
PFLU_RS13605 +0.7 1.9 DUF4880 domain-containing protein compare
PFLU_RS00410 +0.7 5.1 cytochrome c4 compare
PFLU_RS02575 +0.7 4.8 GTPase HflX compare
PFLU_RS08280 +0.7 1.9 hypothetical protein compare
PFLU_RS29780 +0.7 3.6 acyl-CoA thioesterase compare
PFLU_RS08490 +0.7 0.7 DEAD/DEAH box helicase compare
PFLU_RS14450 +0.7 1.6 AzlD domain-containing protein compare
PFLU_RS21910 +0.7 5.7 BamA/TamA family outer membrane protein compare
PFLU_RS00435 +0.7 5.6 PAS domain-containing protein compare
PFLU_RS08575 +0.6 1.7 hypothetical protein compare
PFLU_RS31755 +0.6 0.8 hypothetical protein compare
PFLU_RS15810 +0.6 1.3 hypothetical protein compare
PFLU_RS15275 +0.6 1.2 hypothetical protein compare
PFLU_RS14560 +0.6 2.0 DNA-binding protein compare
PFLU_RS13640 +0.6 1.2 isochorismatase family protein compare
PFLU_RS22380 +0.6 3.2 sulfite exporter TauE/SafE family protein compare
PFLU_RS12205 +0.6 2.1 DNA binding protein compare
PFLU_RS17940 +0.6 2.8 low molecular weight phosphotyrosine protein phosphatase compare
PFLU_RS12580 +0.6 4.0 MurR/RpiR family transcriptional regulator compare
PFLU_RS02925 +0.6 2.7 ABC transporter ATP-binding protein compare
PFLU_RS17545 +0.6 0.7 DUF465 domain-containing protein compare
PFLU_RS27755 +0.6 3.0 glutathione S-transferase compare
PFLU_RS21670 +0.6 4.7 flagellar biosynthesis protein FlhF compare
PFLU_RS28320 +0.6 1.3 glutathione synthase compare
PFLU_RS04200 +0.6 5.1 cytochrome bc complex cytochrome b subunit compare
PFLU_RS03555 +0.6 0.7 EscS/YscS/HrcS family type III secretion system export apparatus protein compare
PFLU_RS31275 +0.6 1.0 hypothetical protein compare
PFLU_RS30390 +0.6 1.9 type III secretion system rspB compare
PFLU_RS15950 +0.6 1.9 2-oxo-hepta-3-ene-1,7-dioic acid hydratase compare
PFLU_RS16530 +0.6 2.3 hypothetical protein compare
PFLU_RS22360 +0.6 5.0 cytochrome c oxidase accessory protein CcoG compare
PFLU_RS31530 +0.6 0.7 transposase compare
PFLU_RS10430 +0.6 1.9 peptidase compare
PFLU_RS00520 +0.6 1.8 DUF2388 domain-containing protein compare
PFLU_RS17295 +0.5 1.9 type VI secretion system contractile sheath small subunit compare
PFLU_RS07495 +0.5 1.3 DUF2892 domain-containing protein compare
PFLU_RS31675 +0.5 1.3 hypothetical protein compare
PFLU_RS14210 +0.5 1.6 TetR/AcrR family transcriptional regulator compare
PFLU_RS04140 +0.5 1.1 response regulator transcription factor compare
PFLU_RS16390 +0.5 0.5 DUF411 domain-containing protein compare
PFLU_RS31010 +0.5 0.7 transposase compare
PFLU_RS03025 +0.5 2.9 tRNA dihydrouridine synthase DusB compare
PFLU_RS20025 +0.5 1.6 amino acid ABC transporter ATP-binding protein compare
PFLU_RS31800 +0.5 1.2 hypothetical protein compare
PFLU_RS11490 +0.5 2.2 ABC transporter ATP-binding protein compare
PFLU_RS15830 +0.5 1.5 His-Xaa-Ser system protein HxsD compare
PFLU_RS15990 +0.5 0.8 SDR family oxidoreductase compare
PFLU_RS24130 +0.5 1.6 protein SlyX compare
PFLU_RS23325 +0.5 3.4 GlxA family transcriptional regulator compare
PFLU_RS22370 +0.5 4.0 cadmium-translocating P-type ATPase compare
PFLU_RS23595 +0.5 4.3 LacI family DNA-binding transcriptional regulator compare
PFLU_RS24015 +0.5 1.5 cold-shock protein compare
PFLU_RS17595 +0.5 2.3 GDP-mannose pyrophosphatase compare
PFLU_RS03400 +0.5 1.5 hypothetical protein compare
PFLU_RS14310 +0.5 2.4 SgcJ/EcaC family oxidoreductase compare
PFLU_RS21580 +0.5 1.3 MOSC domain-containing protein compare
PFLU_RS11565 +0.5 2.3 GntP family transporter compare
PFLU_RS10980 +0.5 2.0 aminotransferase class I/II-fold pyridoxal phosphate-dependent enzyme compare
PFLU_RS10630 +0.5 2.4 LysR family transcriptional regulator compare
PFLU_RS17070 +0.5 1.9 DNA-3-methyladenine glycosylase I compare
PFLU_RS10355 +0.5 1.9 DeoR family transcriptional regulator compare
PFLU_RS27925 +0.5 2.5 GlxA family transcriptional regulator compare
PFLU_RS06430 +0.5 3.9 RNA polymerase sigma factor RpoS compare
PFLU_RS15970 +0.5 1.1 DUF861 domain-containing protein compare
PFLU_RS10300 +0.5 4.1 transaldolase compare
PFLU_RS11350 +0.5 2.3 LLM class flavin-dependent oxidoreductase compare
PFLU_RS13085 +0.5 1.3 DUF1315 family protein compare
PFLU_RS17080 +0.5 1.4 FadR family transcriptional regulator compare
PFLU_RS29485 +0.5 1.7 DUF4870 domain-containing protein compare
PFLU_RS23170 +0.5 2.4 flagellar hook assembly protein FlgD compare
PFLU_RS18350 +0.5 0.7 GIY-YIG nuclease family protein compare
PFLU_RS16360 +0.5 2.2 hypothetical protein compare
PFLU_RS29070 +0.5 2.3 hypothetical protein compare
PFLU_RS09350 +0.5 2.5 hypothetical protein compare
PFLU_RS02690 +0.5 0.9 hypothetical protein compare
PFLU_RS25090 +0.5 2.4 PepSY domain-containing protein compare
PFLU_RS10685 +0.5 2.3 hydratase compare
PFLU_RS21050 +0.5 2.1 hypothetical protein compare
PFLU_RS04205 +0.5 3.4 cytochrome c1 compare
PFLU_RS18080 +0.5 1.4 helix-turn-helix transcriptional regulator compare
PFLU_RS25325 +0.5 2.3 HopJ type III effector protein compare
PFLU_RS18055 +0.5 0.9 hydrolase compare
PFLU_RS12230 +0.5 1.8 carboxymuconolactone decarboxylase family protein compare
PFLU_RS26490 +0.5 1.6 cation diffusion facilitator family transporter compare
PFLU_RS21610 +0.5 2.3 DUF2802 domain-containing protein compare
PFLU_RS20185 +0.5 1.7 hypothetical protein compare
PFLU_RS21730 +0.4 3.3 flagellar basal body-associated protein FliL compare
PFLU_RS01475 +0.4 4.0 UDP-forming cellulose synthase catalytic subunit compare
PFLU_RS29105 +0.4 3.5 DedA family protein compare
PFLU_RS00210 +0.4 0.9 OsmC family protein compare
PFLU_RS11930 +0.4 1.0 biopolymer transporter ExbD compare
PFLU_RS16600 +0.4 2.1 VOC family protein compare
PFLU_RS12145 +0.4 0.9 nuclear transport factor 2 family protein compare
PFLU_RS17895 +0.4 2.3 glycosyltransferase family 2 protein compare
PFLU_RS01480 +0.4 3.9 cellulose biosynthesis cyclic di-GMP-binding regulatory protein BcsB compare
PFLU_RS27465 +0.4 1.5 16S rRNA (adenine(1518)-N(6)/adenine(1519)-N(6))- dimethyltransferase RsmA compare
PFLU_RS23740 +0.4 3.9 porin compare
PFLU_RS14875 +0.4 2.1 hypothetical protein compare
PFLU_RS17380 +0.4 1.6 DUF924 family protein compare
PFLU_RS12915 +0.4 1.2 methyltransferase domain-containing protein compare
PFLU_RS13065 +0.4 2.2 ser/threonine protein phosphatase compare
PFLU_RS08600 +0.4 1.8 glutaredoxin family protein compare
PFLU_RS16595 +0.4 1.7 hypothetical protein compare
PFLU_RS00405 +0.4 1.8 cytochrome c5 family protein compare
PFLU_RS29815 +0.4 1.8 aspartate ammonia-lyase compare
PFLU_RS31595 +0.4 1.4 hypothetical protein compare
PFLU_RS14300 +0.4 0.6 response regulator transcription factor compare
PFLU_RS08360 +0.4 1.6 hypothetical protein compare
PFLU_RS21790 +0.4 2.9 PAS domain-containing protein compare
PFLU_RS06810 +0.4 2.4 efflux RND transporter periplasmic adaptor subunit compare
PFLU_RS21805 +0.4 3.3 flagellar export chaperone FliS compare
PFLU_RS23810 +0.4 1.4 hypothetical protein compare
PFLU_RS08615 +0.4 1.1 YgdI/YgdR family lipoprotein compare
PFLU_RS01490 +0.4 3.8 cellulose biosynthesis protein BcsC compare
PFLU_RS31635 +0.4 1.0 IS21 family transposase compare
PFLU_RS30480 +0.4 2.0 hypothetical protein compare
PFLU_RS18420 +0.4 1.0 hypothetical protein compare
PFLU_RS29380 +0.4 3.1 D-amino acid dehydrogenase compare
PFLU_RS20770 +0.4 1.2 membrane protein compare
PFLU_RS23935 +0.4 2.1 response regulator transcription factor compare
PFLU_RS21655 +0.4 2.1 response regulator compare
PFLU_RS08620 +0.4 1.9 molybdenum cofactor guanylyltransferase MobA compare
PFLU_RS13835 +0.4 1.7 phage recombination protein Bet compare
PFLU_RS24865 +0.4 1.9 serine O-acetyltransferase compare
PFLU_RS22020 +0.4 2.3 5,6-dimethylbenzimidazole synthase compare
PFLU_RS14355 +0.4 1.2 DUF2388 domain-containing protein compare
PFLU_RS21820 +0.4 2.9 flagellin compare
PFLU_RS19705 +0.4 1.9 amino acid ABC transporter permease compare
PFLU_RS26090 +0.4 1.4 methyl-accepting chemotaxis protein compare
PFLU_RS25595 +0.4 0.6 exodeoxyribonuclease V subunit gamma compare


Specific Phenotypes

None in this experiment

For Pseudomonas fluorescens SBW25-INTG in no stress control experiments

For no stress control D-Glucose across organisms