Experiment set13IT052 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 0.5x with Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS20355 -7.0 -2.9 colicin V production protein compare
BWI76_RS18930 -7.0 -3.5 histidinol-phosphate transaminase compare
BWI76_RS18940 -6.9 -4.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS20350 -6.8 -6.7 amidophosphoribosyltransferase compare
BWI76_RS20965 -6.7 -3.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS02995 -6.2 -6.9 aspartate carbamoyltransferase compare
BWI76_RS25700 -5.8 -5.5 heavy metal-responsive transcriptional regulator compare
BWI76_RS23365 -5.7 -2.6 LysR family transcriptional regulator compare
BWI76_RS21265 -5.7 -12.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS26460 -5.6 -3.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS04470 -5.5 -6.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS01610 -5.5 -8.1 phosphoribosylamine--glycine ligase compare
BWI76_RS26425 -5.5 -9.2 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS04255 -5.4 -9.4 threonine synthase compare
BWI76_RS18950 -5.4 -3.2 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS17975 -5.4 -3.1 tail-specific protease compare
BWI76_RS08385 -5.4 -2.2 citrate (Si)-synthase compare
BWI76_RS00845 -5.4 -8.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS01615 -5.3 -10.8 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04250 -5.3 -7.3 homoserine kinase compare
BWI76_RS18925 -5.3 -5.8 histidinol dehydrogenase compare
BWI76_RS27385 -5.3 -8.7 orotate phosphoribosyltransferase compare
BWI76_RS00875 -5.2 -3.6 DNA-binding transcriptional regulator FabR compare
BWI76_RS00855 -5.2 -9.9 argininosuccinate lyase compare
BWI76_RS18935 -5.2 -7.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS16965 -4.9 -1.7 murein lipoprotein compare
BWI76_RS04465 -4.9 -4.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS26455 -4.8 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS04305 -4.7 -1.1 molecular chaperone DnaJ compare
BWI76_RS18920 -4.7 -3.1 ATP phosphoribosyltransferase compare
BWI76_RS24340 -4.7 -8.6 two-component sensor histidine kinase compare
BWI76_RS26395 -4.6 -6.6 cell division protein FtsE compare
BWI76_RS23265 -4.6 -1.6 hypothetical protein compare
BWI76_RS03010 -4.5 -9.5 ornithine carbamoyltransferase compare
BWI76_RS04245 -4.5 -11.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS21345 -4.4 -1.8 sigma-E factor regulatory protein RseB compare
BWI76_RS01095 -4.4 -2.5 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS09760 -4.4 -2.6 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS11965 -4.4 -2.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04240 -4.4 -1.4 thr operon leader peptide compare
BWI76_RS19840 -4.3 -1.1 hypothetical protein compare
BWI76_RS11850 -4.3 -10.6 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00975 -4.3 -8.7 dihydroxy-acid dehydratase compare
BWI76_RS07065 -4.3 -4.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS07070 -4.3 -4.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS23220 -4.2 -6.4 amino-acid N-acetyltransferase compare
BWI76_RS26000 -4.2 -5.9 aspartate aminotransferase family protein compare
BWI76_RS17980 -4.2 -3.1 RNA chaperone ProQ compare
BWI76_RS09625 -4.2 -1.0 hypothetical protein compare
BWI76_RS11860 -4.2 -7.3 anthranilate synthase component I compare
BWI76_RS01655 -4.2 -8.4 homoserine O-succinyltransferase compare
BWI76_RS21350 -4.2 -3.7 anti-RNA polymerase sigma factor SigE compare
BWI76_RS00835 -4.1 -10.6 phosphoenolpyruvate carboxylase compare
BWI76_RS09910 -4.1 -15.6 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS05260 -4.1 -1.0 chaperone compare
BWI76_RS00850 -4.1 -6.0 acetylglutamate kinase compare
BWI76_RS20440 -4.1 -3.3 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS05015 -4.0 -1.9 transcriptional regulator compare
BWI76_RS15975 -4.0 -1.0 hypothetical protein compare
BWI76_RS16515 -4.0 -1.4 LysR family transcriptional regulator compare
BWI76_RS25115 -4.0 -4.3 argininosuccinate synthase compare
BWI76_RS05840 -4.0 -2.5 glutamate 5-kinase compare
BWI76_RS21475 -4.0 -3.3 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS08520 -3.9 -1.6 colicin transporter TolQ compare
BWI76_RS11855 -3.9 -5.5 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS22755 -3.8 -4.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS18955 -3.8 -3.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00990 -3.8 -10.1 ketol-acid reductoisomerase compare
BWI76_RS04665 -3.8 -20.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01125 -3.7 -6.9 4-alpha-L-fucosyltransferase compare
BWI76_RS00965 -3.7 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS11845 -3.7 -1.8 tryptophan synthase subunit beta compare
BWI76_RS20895 -3.6 -4.3 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS04670 -3.6 -9.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS08535 -3.6 -1.5 translocation protein TolB compare
BWI76_RS00785 -3.6 -6.7 cystathionine gamma-synthase compare
BWI76_RS04675 -3.5 -7.1 3-isopropylmalate dehydrogenase compare
BWI76_RS04645 -3.5 -2.4 3-dehydroquinase compare
BWI76_RS21070 -3.5 -1.4 outer membrane protein assembly factor BamB compare
BWI76_RS08525 -3.5 -2.1 colicin transporter compare
BWI76_RS09645 -3.5 -0.8 thioredoxin-disulfide reductase compare
BWI76_RS22760 -3.5 -6.8 sulfite reductase subunit beta compare
BWI76_RS06525 -3.5 -2.9 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS00720 -3.5 -1.6 DNA-binding response regulator compare
BWI76_RS04525 -3.5 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS22765 -3.5 -9.8 sulfite reductase subunit alpha compare
BWI76_RS25335 -3.4 -1.4 stringent starvation protein A compare
BWI76_RS25645 -3.4 -6.4 shikimate dehydrogenase compare
BWI76_RS20390 -3.4 -3.9 erythronate-4-phosphate dehydrogenase compare
BWI76_RS14320 -3.4 -1.8 hypothetical protein compare
BWI76_RS04160 -3.3 -3.1 phosphoserine phosphatase compare
BWI76_RS00980 -3.2 -10.0 PLP-dependent threonine dehydratase compare
BWI76_RS01115 -3.2 -2.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS20380 -3.2 -0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS08530 -3.2 -1.1 protein TolA compare
BWI76_RS05835 -3.1 -1.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS10990 -3.1 -2.2 dihydroorotase compare
BWI76_RS04680 -3.1 -9.7 2-isopropylmalate synthase compare
BWI76_RS09755 -3.1 -2.1 phosphoserine transaminase compare
BWI76_RS23920 -3.1 -1.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS21450 -3.0 -1.4 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS26570 -3.0 -1.9 anion permease compare
BWI76_RS04715 -3.0 -2.0 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS27425 -3.0 -1.2 DNA-directed RNA polymerase subunit omega compare
BWI76_RS06535 -3.0 -2.0 endopeptidase La compare
BWI76_RS16375 -3.0 -2.3 electron transport complex subunit G compare
BWI76_RS00805 -2.9 -3.1 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS02775 -2.8 -4.7 outer membrane protein assembly factor compare
BWI76_RS21075 -2.8 -1.1 membrane protein compare
BWI76_RS01110 -2.8 -5.2 TDP-fucosamine acetyltransferase compare
BWI76_RS26670 -2.8 -6.6 two-component sensor histidine kinase compare
BWI76_RS01800 -2.8 -1.7 glucose-6-phosphate isomerase compare
BWI76_RS10935 -2.8 -4.4 glucan biosynthesis glucosyltransferase H compare
BWI76_RS23360 -2.7 -1.2 diaminopimelate decarboxylase compare
BWI76_RS01220 -2.7 -5.1 DNA-dependent helicase II compare
BWI76_RS01135 -2.7 -3.2 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS00345 -2.7 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS10575 -2.7 -0.9 polar amino acid ABC transporter permease compare
BWI76_RS08765 -2.7 -2.7 8-amino-7-oxononanoate synthase compare
BWI76_RS00390 -2.7 -5.5 two-component system sensor histidine kinase NtrB compare
BWI76_RS24285 -2.7 -6.5 cystathionine beta-lyase compare
BWI76_RS04685 -2.7 -7.5 putative leucine operon leader peptide compare
BWI76_RS08760 -2.6 -5.2 biotin synthase compare
BWI76_RS08040 -2.5 -1.8 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS04100 -2.5 -3.0 peptide chain release factor 3 compare
BWI76_RS09970 -2.5 -0.8 porin OmpA compare
BWI76_RS21465 -2.5 -4.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS21675 -2.4 -0.8 hypothetical protein compare
BWI76_RS05120 -2.4 -6.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS15825 -2.4 -0.8 hypothetical protein compare
BWI76_RS01210 -2.4 -1.0 tyrosine recombinase XerC compare
BWI76_RS22690 -2.4 -1.2 adenylyl-sulfate kinase compare
BWI76_RS19685 -2.4 -3.6 lysine transporter compare
BWI76_RS25300 -2.4 -1.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS16425 -2.4 -1.8 hypothetical protein compare
BWI76_RS08210 -2.4 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS06680 -2.3 -1.1 hypothetical protein compare
BWI76_RS27450 -2.3 -5.1 ferredoxin--NADP(+) reductase compare
BWI76_RS27390 -2.3 -3.1 ribonuclease PH compare
BWI76_RS15740 -2.3 -2.7 HNH endonuclease compare
BWI76_RS27915 -2.3 -1.7 YceK/YidQ family lipoprotein compare
BWI76_RS24900 -2.2 -1.0 DeoR family transcriptional regulator compare
BWI76_RS20750 -2.2 -0.7 carboxysome structural protein EutK compare
BWI76_RS15635 -2.2 -4.2 hypothetical protein compare
BWI76_RS14505 -2.2 -1.5 salicylate synthase Irp9 compare
BWI76_RS04990 -2.2 -4.1 pantoate--beta-alanine ligase compare
BWI76_RS04995 -2.2 -5.6 3-methyl-2-oxobutanoate hydroxymethyltransferase compare
BWI76_RS00960 -2.2 -5.0 acetolactate synthase 2 catalytic subunit compare
BWI76_RS27440 -2.2 -1.5 DNA helicase RecG compare
BWI76_RS24400 -2.2 -2.6 outer membrane channel protein TolC compare
BWI76_RS17185 -2.2 -2.8 fructosamine kinase family protein compare
BWI76_RS05450 -2.2 -0.7 ribonuclease HI compare
BWI76_RS23985 -2.2 -5.7 erythrose-4-phosphate dehydrogenase compare
BWI76_RS22805 -2.1 -6.7 GTP diphosphokinase compare
BWI76_RS00400 -2.1 -0.9 glutamine synthetase compare
BWI76_RS01195 -2.1 -1.1 membrane protein compare
BWI76_RS10930 -2.1 -4.7 glucan biosynthesis protein G compare
BWI76_RS06530 -2.1 -4.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS26665 -2.1 -1.8 DNA-binding response regulator compare
BWI76_RS09305 -2.1 -2.9 hypothetical protein compare
BWI76_RS24885 -2.1 -0.8 PTS galactitol transporter subunit IIB compare
BWI76_RS25320 -2.1 -7.2 glutamate synthase compare
BWI76_RS09615 -2.1 -2.0 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS24605 -2.0 -4.6 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS03225 -2.0 -5.7 transcriptional regulator compare
BWI76_RS04845 -2.0 -5.2 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS18815 -2.0 -2.1 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS21370 -2.0 -0.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS26730 -1.9 -3.6 inner membrane protein YhjD compare
BWI76_RS00240 -1.9 -0.9 FMN-binding protein MioC compare
BWI76_RS01080 -1.9 -5.3 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS00355 -1.9 -1.5 DNA polymerase I compare
BWI76_RS07465 -1.9 -0.8 TetR family transcriptional regulator compare
BWI76_RS00600 -1.9 -3.6 LacI family transcriptional regulator compare
BWI76_RS07640 -1.9 -1.8 short chain dehydrogenase compare
BWI76_RS08020 -1.9 -5.3 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS05075 -1.9 -0.4 type II secretion system protein GspG compare
BWI76_RS25280 -1.9 -1.0 RNase adaptor protein RapZ compare
BWI76_RS17720 -1.8 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS08775 -1.8 -6.7 dethiobiotin synthase compare
BWI76_RS01275 -1.8 -8.1 LysR family transcriptional regulator compare
BWI76_RS09335 -1.8 -0.7 baseplate assembly protein W compare
BWI76_RS15110 -1.8 -2.2 putative excinuclease ABC subunit A compare
BWI76_RS09655 -1.8 -3.0 leucine-responsive regulatory protein compare
BWI76_RS16955 -1.8 -0.6 hypothetical protein compare
BWI76_RS20640 -1.8 -2.6 cysteine synthase A compare
BWI76_RS20720 -1.8 -0.7 hypothetical protein compare
BWI76_RS12400 -1.8 -5.3 TetR family transcriptional regulator compare
BWI76_RS13050 -1.8 -1.5 transcriptional regulator compare
BWI76_RS08580 -1.8 -2.5 quinolinate synthetase compare
BWI76_RS02780 -1.8 -9.3 translocation and assembly module TamB compare
BWI76_RS25315 -1.8 -9.3 glutamate synthase large subunit compare
BWI76_RS02550 -1.8 -2.9 protease modulator HflC compare
BWI76_RS19375 -1.8 -1.3 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS10835 -1.8 -0.8 hypothetical protein compare
BWI76_RS24580 -1.8 -4.4 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS01105 -1.8 -2.0 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS05005 -1.7 -1.6 polynucleotide adenylyltransferase compare
BWI76_RS04985 -1.7 -3.1 aspartate 1-decarboxylase compare
BWI76_RS23830 -1.7 -3.6 hypothetical protein compare


Specific Phenotypes

For 5 genes in this experiment

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL in Klebsiella michiganensis M5al

For mixed community Mixed culture; Trichoderma harzianum M10 spores at 2.5*10^6 spores/mL across organisms