Experiment set13IT045 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS01115 -6.0 -2.4 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS17975 -5.5 -3.2 tail-specific protease compare
BWI76_RS12090 -5.0 -2.0 HNH endonuclease compare
BWI76_RS26455 -4.6 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS19840 -4.4 -1.1 hypothetical protein compare
BWI76_RS08525 -4.3 -1.7 colicin transporter compare
BWI76_RS08520 -4.0 -1.7 colicin transporter TolQ compare
BWI76_RS04465 -4.0 -3.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS05260 -4.0 -1.0 chaperone compare
BWI76_RS05015 -4.0 -1.9 transcriptional regulator compare
BWI76_RS09335 -3.9 -0.9 baseplate assembly protein W compare
BWI76_RS25960 -3.8 -2.5 NUDIX hydrolase compare
BWI76_RS21475 -3.7 -3.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS05840 -3.5 -2.9 glutamate 5-kinase compare
BWI76_RS00965 -3.5 -0.8 acetolactate synthase 2 small subunit compare
BWI76_RS04160 -3.5 -2.9 phosphoserine phosphatase compare
BWI76_RS20150 -3.4 -1.4 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS08530 -3.3 -1.1 protein TolA compare
BWI76_RS20380 -3.3 -0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS00345 -3.2 -3.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS25920 -3.2 -1.3 peptidylprolyl isomerase compare
BWI76_RS19770 -3.1 -1.1 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS05835 -3.1 -1.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS03295 -3.0 -1.0 transposase compare
BWI76_RS06535 -3.0 -2.0 endopeptidase La compare
BWI76_RS20360 -2.9 -0.7 cell division protein DedD compare
BWI76_RS27425 -2.9 -1.2 DNA-directed RNA polymerase subunit omega compare
BWI76_RS22420 -2.9 -2.1 LacI family transcriptional regulator compare
BWI76_RS24100 -2.9 -3.4 YggS family pyridoxal phosphate enzyme compare
BWI76_RS10575 -2.9 -1.0 polar amino acid ABC transporter permease compare
BWI76_RS10745 -2.8 -0.9 hypothetical protein compare
BWI76_RS26390 -2.8 -6.3 cell division protein FtsX compare
BWI76_RS15825 -2.8 -0.9 hypothetical protein compare
BWI76_RS22755 -2.7 -4.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS15015 -2.7 -1.3 DUF2132 domain-containing protein compare
BWI76_RS25335 -2.7 -1.5 stringent starvation protein A compare
BWI76_RS23360 -2.7 -1.2 diaminopimelate decarboxylase compare
BWI76_RS25300 -2.5 -2.0 hybrid sensor histidine kinase/response regulator compare
BWI76_RS26460 -2.5 -2.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS08210 -2.4 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS09755 -2.4 -3.5 phosphoserine transaminase compare
BWI76_RS17980 -2.4 -3.2 RNA chaperone ProQ compare
BWI76_RS07465 -2.4 -0.7 TetR family transcriptional regulator compare
BWI76_RS13315 -2.4 -1.7 50S ribosomal protein L7/L12-serine acetyltransferase compare
BWI76_RS11255 -2.4 -1.8 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS21690 -2.4 -1.7 hypothetical protein compare
BWI76_RS23265 -2.4 -1.8 hypothetical protein compare
BWI76_RS13820 -2.3 -1.2 hypothetical protein compare
BWI76_RS04250 -2.3 -5.5 homoserine kinase compare
BWI76_RS23365 -2.3 -2.5 LysR family transcriptional regulator compare
BWI76_RS01210 -2.3 -0.9 tyrosine recombinase XerC compare
BWI76_RS20750 -2.3 -0.7 carboxysome structural protein EutK compare
BWI76_RS25065 -2.2 -3.2 polyribonucleotide nucleotidyltransferase compare
BWI76_RS16210 -2.2 -1.4 hypothetical protein compare
BWI76_RS20965 -2.2 -2.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20355 -2.2 -3.4 colicin V production protein compare
BWI76_RS08605 -2.2 -1.6 phosphoglyceromutase compare
BWI76_RS13560 -2.2 -0.7 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS20280 -2.1 -3.4 phosphodiesterase compare
BWI76_RS24900 -2.1 -1.0 DeoR family transcriptional regulator compare
BWI76_RS05450 -2.1 -0.7 ribonuclease HI compare
BWI76_RS23920 -2.1 -2.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09730 -2.1 -0.7 pyruvate formate lyase 1-activating protein compare
BWI76_RS00875 -2.1 -2.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS23885 -2.0 -0.7 2-octaprenylphenol hydroxylase compare
BWI76_RS00400 -2.0 -0.8 glutamine synthetase compare
BWI76_RS21370 -2.0 -0.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS01220 -2.0 -4.1 DNA-dependent helicase II compare
BWI76_RS12400 -2.0 -4.7 TetR family transcriptional regulator compare
BWI76_RS17720 -2.0 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS04685 -2.0 -5.5 putative leucine operon leader peptide compare
BWI76_RS20335 -2.0 -3.4 zinc transporter compare
BWI76_RS05915 -1.9 -2.4 helix-turn-helix transcriptional regulator compare
BWI76_RS26395 -1.9 -3.4 cell division protein FtsE compare
BWI76_RS25115 -1.9 -3.3 argininosuccinate synthase compare
BWI76_RS23520 -1.9 -1.4 hypothetical protein compare
BWI76_RS00855 -1.9 -5.9 argininosuccinate lyase compare
BWI76_RS08275 -1.9 -1.5 LexA regulated protein compare
BWI76_RS04470 -1.9 -5.0 carbamoyl phosphate synthase large subunit compare
BWI76_RS10990 -1.8 -2.3 dihydroorotase compare
BWI76_RS01095 -1.8 -1.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS00805 -1.8 -3.1 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS26665 -1.8 -2.4 DNA-binding response regulator compare
BWI76_RS14320 -1.8 -1.5 hypothetical protein compare
BWI76_RS12050 -1.8 -2.8 hypothetical protein compare
BWI76_RS09255 -1.8 -2.4 hypothetical protein compare
BWI76_RS17300 -1.7 -0.5 tRNA-Tyr compare
BWI76_RS24600 -1.7 -1.9 dihydroxyacetone kinase compare
BWI76_RS15110 -1.7 -5.6 putative excinuclease ABC subunit A compare
BWI76_RS22765 -1.7 -6.9 sulfite reductase subunit alpha compare
BWI76_RS09670 -1.6 -2.4 recombination factor protein RarA compare
BWI76_RS18950 -1.6 -2.4 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00990 -1.6 -5.0 ketol-acid reductoisomerase compare
BWI76_RS22760 -1.6 -4.1 sulfite reductase subunit beta compare
BWI76_RS04100 -1.6 -1.8 peptide chain release factor 3 compare
BWI76_RS10835 -1.6 -0.8 hypothetical protein compare
BWI76_RS00835 -1.6 -6.1 phosphoenolpyruvate carboxylase compare
BWI76_RS00975 -1.6 -7.3 dihydroxy-acid dehydratase compare
BWI76_RS07065 -1.6 -4.1 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS16490 -1.6 -1.1 glutaredoxin compare
BWI76_RS08020 -1.6 -3.0 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS09970 -1.6 -1.0 porin OmpA compare
BWI76_RS23220 -1.5 -4.8 amino-acid N-acetyltransferase compare
BWI76_RS07185 -1.5 -0.8 hypothetical protein compare
BWI76_RS08495 -1.5 -2.3 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS11860 -1.5 -5.6 anthranilate synthase component I compare
BWI76_RS21870 -1.5 -4.4 hypothetical protein compare
BWI76_RS15920 -1.5 -0.9 hypothetical protein compare
BWI76_RS12145 -1.5 -1.1 hypothetical protein compare
BWI76_RS01800 -1.5 -1.4 glucose-6-phosphate isomerase compare
BWI76_RS18225 -1.5 -2.6 universal stress protein C compare
BWI76_RS27915 -1.5 -1.2 YceK/YidQ family lipoprotein compare
BWI76_RS15115 -1.5 -1.0 MFS transporter compare
BWI76_RS12215 -1.5 -2.7 HNH endonuclease compare
BWI76_RS21580 -1.5 -0.6 SsrA-binding protein compare
BWI76_RS19010 -1.5 -1.7 polysaccharide pyruvyl transferase yvff compare
BWI76_RS06405 -1.4 -1.1 2-dehydropantoate 2-reductase compare
BWI76_RS09025 -1.4 -1.7 GntR family transcriptional regulator compare
BWI76_RS00845 -1.4 -4.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS03225 -1.4 -3.9 transcriptional regulator compare
BWI76_RS15655 -1.4 -3.9 hypothetical protein compare
BWI76_RS12205 -1.4 -2.8 hypothetical protein compare
BWI76_RS05120 -1.4 -4.3 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS00715 -1.4 -0.9 two-component sensor histidine kinase compare
BWI76_RS09625 -1.4 -0.7 hypothetical protein compare
BWI76_RS18935 -1.4 -3.5 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS27745 -1.4 -3.0 PTS sugar transporter subunit IIB compare
BWI76_RS24405 -1.4 -3.5 hypothetical protein compare
BWI76_RS15705 -1.3 -2.6 putative holin protein compare
BWI76_RS18605 -1.3 -0.9 oxidoreductase molybdopterin-binding protein compare
BWI76_RS00980 -1.3 -5.0 PLP-dependent threonine dehydratase compare
BWI76_RS04245 -1.3 -6.4 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS00850 -1.3 -3.9 acetylglutamate kinase compare
BWI76_RS13025 -1.3 -2.3 histidine phosphatase family protein compare
BWI76_RS05025 -1.3 -2.0 2'-5' RNA ligase compare
BWI76_RS09190 -1.3 -1.8 hypothetical protein compare
BWI76_RS10950 -1.3 -1.1 MFS transporter compare
BWI76_RS27385 -1.3 -3.6 orotate phosphoribosyltransferase compare
BWI76_RS18930 -1.3 -1.7 histidinol-phosphate transaminase compare
BWI76_RS20970 -1.3 -1.2 phosphoribosylglycinamide formyltransferase compare
BWI76_RS20350 -1.3 -3.0 amidophosphoribosyltransferase compare
BWI76_RS13245 -1.3 -1.5 DNA-damage-inducible protein I compare
BWI76_RS18940 -1.3 -3.0 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS08375 -1.3 -1.1 pyroglutamyl-peptidase I compare
BWI76_RS12320 -1.3 -4.3 hypothetical protein compare
BWI76_RS27440 -1.3 -1.5 DNA helicase RecG compare
BWI76_RS04675 -1.3 -2.9 3-isopropylmalate dehydrogenase compare
BWI76_RS15530 -1.3 -2.0 hypothetical protein compare
BWI76_RS15720 -1.3 -1.5 prophage protein NinE compare
BWI76_RS11900 -1.3 -0.7 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS18360 -1.3 -1.1 aminocyclopropane-1-carboxylate deaminase/D-cysteine desulfhydrase family protein compare
BWI76_RS14005 -1.3 -0.9 TetR family transcriptional regulator compare
BWI76_RS26075 -1.3 -0.7 DNA adenine methylase compare
BWI76_RS12260 -1.3 -2.9 hypothetical protein compare
BWI76_RS11850 -1.3 -4.0 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS21660 -1.2 -1.0 antirestriction protein compare
BWI76_RS07985 -1.2 -0.7 fluoride ion transporter CrcB compare
BWI76_RS09825 -1.2 -2.5 envelope biogenesis factor ElyC compare
BWI76_RS22805 -1.2 -4.5 GTP diphosphokinase compare
BWI76_RS02995 -1.2 -2.4 aspartate carbamoyltransferase compare
BWI76_RS14835 -1.2 -1.5 hypothetical protein compare
BWI76_RS07780 -1.2 -0.9 hypothetical protein compare
BWI76_RS15840 -1.2 -2.4 prophage protein compare
BWI76_RS04665 -1.2 -7.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01615 -1.2 -4.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS21140 -1.2 -0.6 molecular chaperone HscA compare
BWI76_RS01080 -1.2 -2.5 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09910 -1.2 -6.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS21465 -1.2 -2.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS15810 -1.2 -3.0 hypothetical protein compare
BWI76_RS02735 -1.2 -2.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS22130 -1.2 -1.3 fructose-1-phosphate/6-phosphogluconate phosphatase compare
BWI76_RS03790 -1.2 -2.8 hypothetical protein compare
BWI76_RS04255 -1.2 -4.0 threonine synthase compare
BWI76_RS11895 -1.2 -1.3 AraC family transcriptional regulator compare
BWI76_RS20930 -1.2 -1.1 arsenate reductase (glutaredoxin) compare
BWI76_RS15515 -1.2 -4.7 hypothetical protein compare
BWI76_RS26440 -1.2 -0.5 hypothetical protein compare
BWI76_RS00180 -1.1 -0.4 F0F1 ATP synthase subunit epsilon compare
BWI76_RS13755 -1.1 -0.7 hypothetical protein compare
BWI76_RS11965 -1.1 -1.8 orotidine-5'-phosphate decarboxylase compare
BWI76_RS15690 -1.1 -2.0 hypothetical protein compare
BWI76_RS14620 -1.1 -1.1 acetylornithine deacetylase or succinyl-diaminopimelate desuccinylase compare
BWI76_RS00415 -1.1 -2.8 glucose-1-phosphatase compare
BWI76_RS02550 -1.1 -1.7 protease modulator HflC compare
BWI76_RS12040 -1.1 -0.9 hypothetical protein compare
BWI76_RS02695 -1.1 -2.2 peptidyl-prolyl cis-trans isomerase compare
BWI76_RS12280 -1.1 -2.9 hypothetical protein compare
BWI76_RS12070 -1.1 -0.7 hypothetical protein compare
BWI76_RS12245 -1.1 -4.1 hypothetical protein compare
BWI76_RS12155 -1.1 -1.9 hypothetical protein compare
BWI76_RS11300 -1.1 -0.5 cupin compare
BWI76_RS18000 -1.1 -2.1 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare
BWI76_RS25060 -1.1 -2.0 lipoprotein NlpI compare
BWI76_RS12870 -1.1 -1.2 putative phytanoyl-CoA dioxygenase compare
BWI76_RS25700 -1.1 -2.1 heavy metal-responsive transcriptional regulator compare
BWI76_RS24740 -1.1 -1.4 GntR family transcriptional regulator compare
BWI76_RS09155 -1.1 -1.8 undecaprenyl-diphosphatase compare
BWI76_RS08405 -1.1 -1.7 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS12270 -1.1 -1.3 hypothetical protein compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella across organisms