Experiment set13IT044 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS09760 -4.8 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS26460 -4.7 -5.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS23265 -4.6 -1.8 hypothetical protein compare
BWI76_RS18920 -4.5 -4.1 ATP phosphoribosyltransferase compare
BWI76_RS19840 -4.5 -1.2 hypothetical protein compare
BWI76_RS05015 -4.3 -2.3 transcriptional regulator compare
BWI76_RS08520 -4.2 -1.9 colicin transporter TolQ compare
BWI76_RS08535 -3.9 -1.8 translocation protein TolB compare
BWI76_RS14320 -3.9 -2.3 hypothetical protein compare
BWI76_RS09645 -3.8 -1.0 thioredoxin-disulfide reductase compare
BWI76_RS16965 -3.5 -2.4 murein lipoprotein compare
BWI76_RS18930 -3.5 -4.3 histidinol-phosphate transaminase compare
BWI76_RS18940 -3.4 -6.5 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS05840 -3.4 -3.8 glutamate 5-kinase compare
BWI76_RS08530 -3.4 -1.3 protein TolA compare
BWI76_RS20380 -3.4 -0.9 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS18925 -3.4 -4.8 histidinol dehydrogenase compare
BWI76_RS04465 -3.3 -6.0 carbamoyl-phosphate synthase small subunit compare
BWI76_RS00355 -3.3 -1.4 DNA polymerase I compare
BWI76_RS23920 -3.3 -1.9 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS18935 -3.2 -6.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS06535 -3.2 -2.2 endopeptidase La compare
BWI76_RS17980 -3.2 -4.0 RNA chaperone ProQ compare
BWI76_RS04240 -3.1 -2.8 thr operon leader peptide compare
BWI76_RS04255 -3.1 -7.3 threonine synthase compare
BWI76_RS09755 -3.1 -3.6 phosphoserine transaminase compare
BWI76_RS08525 -3.1 -2.7 colicin transporter compare
BWI76_RS01350 -2.9 -0.8 NAD(P)H-flavin reductase compare
BWI76_RS24580 -2.9 -4.0 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS01800 -2.9 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS23365 -2.9 -4.7 LysR family transcriptional regulator compare
BWI76_RS04250 -2.9 -7.1 homoserine kinase compare
BWI76_RS22755 -2.9 -4.6 phosphoadenosine phosphosulfate reductase compare
BWI76_RS01615 -2.9 -10.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS15825 -2.9 -1.1 hypothetical protein compare
BWI76_RS04470 -2.8 -9.7 carbamoyl phosphate synthase large subunit compare
BWI76_RS00855 -2.8 -8.6 argininosuccinate lyase compare
BWI76_RS08385 -2.8 -3.0 citrate (Si)-synthase compare
BWI76_RS26570 -2.7 -2.7 anion permease compare
BWI76_RS09625 -2.7 -1.2 hypothetical protein compare
BWI76_RS10990 -2.7 -3.2 dihydroorotase compare
BWI76_RS18950 -2.6 -4.8 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS26390 -2.6 -6.1 cell division protein FtsX compare
BWI76_RS23490 -2.6 -8.8 fimbrial protein compare
BWI76_RS26455 -2.6 -2.3 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS00720 -2.5 -1.7 DNA-binding response regulator compare
BWI76_RS01210 -2.5 -1.1 tyrosine recombinase XerC compare
BWI76_RS26395 -2.5 -6.9 cell division protein FtsE compare
BWI76_RS07465 -2.5 -0.8 TetR family transcriptional regulator compare
BWI76_RS00965 -2.5 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS02745 -2.5 -1.5 hypothetical protein compare
BWI76_RS24605 -2.4 -5.3 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS03010 -2.4 -7.3 ornithine carbamoyltransferase compare
BWI76_RS14390 -2.4 -1.5 hypothetical protein compare
BWI76_RS24900 -2.4 -1.2 DeoR family transcriptional regulator compare
BWI76_RS05260 -2.4 -1.1 chaperone compare
BWI76_RS00345 -2.4 -3.7 protein disulfide oxidoreductase DsbA compare
BWI76_RS25115 -2.4 -6.7 argininosuccinate synthase compare
BWI76_RS04245 -2.3 -9.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04645 -2.3 -3.8 3-dehydroquinase compare
BWI76_RS00875 -2.3 -5.0 DNA-binding transcriptional regulator FabR compare
BWI76_RS05450 -2.3 -0.8 ribonuclease HI compare
BWI76_RS00845 -2.2 -7.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS23885 -2.2 -0.8 2-octaprenylphenol hydroxylase compare
BWI76_RS15110 -2.2 -4.2 putative excinuclease ABC subunit A compare
BWI76_RS14005 -2.2 -1.4 TetR family transcriptional regulator compare
BWI76_RS15000 -2.2 -3.5 amino acid ABC transporter ATP-binding protein compare
BWI76_RS09730 -2.2 -0.8 pyruvate formate lyase 1-activating protein compare
BWI76_RS17975 -2.2 -5.0 tail-specific protease compare
BWI76_RS22765 -2.2 -6.6 sulfite reductase subunit alpha compare
BWI76_RS25065 -2.2 -3.3 polyribonucleotide nucleotidyltransferase compare
BWI76_RS00850 -2.1 -8.4 acetylglutamate kinase compare
BWI76_RS12090 -2.1 -3.0 HNH endonuclease compare
BWI76_RS17720 -2.1 -0.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS22805 -2.1 -9.1 GTP diphosphokinase compare
BWI76_RS20355 -2.1 -3.5 colicin V production protein compare
BWI76_RS27440 -2.1 -2.0 DNA helicase RecG compare
BWI76_RS01080 -2.1 -6.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS12265 -2.1 -3.5 hypothetical protein compare
BWI76_RS11845 -2.1 -3.1 tryptophan synthase subunit beta compare
BWI76_RS00240 -2.0 -1.0 FMN-binding protein MioC compare
BWI76_RS07070 -2.0 -4.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS21165 -2.0 -1.4 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS21265 -2.0 -9.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS09910 -2.0 -11.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS21075 -2.0 -1.5 membrane protein compare
BWI76_RS21690 -2.0 -2.1 hypothetical protein compare
BWI76_RS02995 -1.9 -6.8 aspartate carbamoyltransferase compare
BWI76_RS08405 -1.9 -2.3 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS23220 -1.9 -5.8 amino-acid N-acetyltransferase compare
BWI76_RS17300 -1.9 -0.7 tRNA-Tyr compare
BWI76_RS05835 -1.9 -1.6 gamma-glutamyl-phosphate reductase compare
BWI76_RS11840 -1.8 -3.8 tryptophan synthase subunit alpha compare
BWI76_RS10935 -1.8 -5.2 glucan biosynthesis glucosyltransferase H compare
BWI76_RS08210 -1.8 -0.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS20895 -1.8 -4.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS21070 -1.8 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS18955 -1.8 -4.3 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS01610 -1.8 -5.1 phosphoribosylamine--glycine ligase compare
BWI76_RS21565 -1.8 -0.8 outer membrane protein assembly factor BamE compare
BWI76_RS09825 -1.8 -4.5 envelope biogenesis factor ElyC compare
BWI76_RS09335 -1.7 -0.9 baseplate assembly protein W compare
BWI76_RS19770 -1.7 -1.2 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS00835 -1.7 -9.2 phosphoenolpyruvate carboxylase compare
BWI76_RS04705 -1.7 -2.8 DNA-binding transcriptional regulator FruR compare
BWI76_RS04160 -1.7 -2.1 phosphoserine phosphatase compare
BWI76_RS20965 -1.7 -3.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS12215 -1.7 -5.3 HNH endonuclease compare
BWI76_RS06680 -1.7 -1.1 hypothetical protein compare
BWI76_RS02530 -1.7 -1.0 tRNA dimethylallyltransferase compare
BWI76_RS21580 -1.7 -0.7 SsrA-binding protein compare
BWI76_RS13755 -1.7 -1.1 hypothetical protein compare
BWI76_RS20350 -1.6 -5.8 amidophosphoribosyltransferase compare
BWI76_RS26470 -1.6 -3.3 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS22690 -1.6 -1.5 adenylyl-sulfate kinase compare
BWI76_RS21570 -1.6 -2.1 RnfH family protein compare
BWI76_RS21370 -1.6 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS15635 -1.6 -5.4 hypothetical protein compare
BWI76_RS06290 -1.6 -1.4 ACP phosphodiesterase compare
BWI76_RS02340 -1.6 -4.7 membrane protein FxsA compare
BWI76_RS09190 -1.6 -2.3 hypothetical protein compare
BWI76_RS26095 -1.6 -0.6 shikimate kinase compare
BWI76_RS06730 -1.6 -1.9 lac repressor compare
BWI76_RS14300 -1.6 -1.6 hypothetical protein compare
BWI76_RS00715 -1.6 -1.1 two-component sensor histidine kinase compare
BWI76_RS01870 -1.6 -2.8 diacylglycerol kinase compare
BWI76_RS12335 -1.6 -5.4 hypothetical protein compare
BWI76_RS27385 -1.6 -4.3 orotate phosphoribosyltransferase compare
BWI76_RS01125 -1.6 -3.5 4-alpha-L-fucosyltransferase compare
BWI76_RS01110 -1.6 -2.5 TDP-fucosamine acetyltransferase compare
BWI76_RS03415 -1.6 -3.7 LacI family transcriptional regulator compare
BWI76_RS23360 -1.5 -1.5 diaminopimelate decarboxylase compare
BWI76_RS21780 -1.5 -3.0 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS17290 -1.5 -4.0 formyltetrahydrofolate deformylase compare
BWI76_RS12460 -1.5 -1.8 envelope stress response membrane protein PspC compare
BWI76_RS27390 -1.5 -4.0 ribonuclease PH compare
BWI76_RS07065 -1.5 -3.9 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS08395 -1.5 -1.3 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS22485 -1.5 -4.1 hypothetical protein compare
BWI76_RS26075 -1.4 -0.9 DNA adenine methylase compare
BWI76_RS21660 -1.4 -1.3 antirestriction protein compare
BWI76_RS11170 -1.4 -0.9 hypothetical protein compare
BWI76_RS15115 -1.4 -1.9 MFS transporter compare
BWI76_RS21340 -1.4 -1.6 SoxR reducing system protein RseC compare
BWI76_RS09255 -1.4 -2.1 hypothetical protein compare
BWI76_RS26440 -1.4 -0.7 hypothetical protein compare
BWI76_RS13915 -1.4 -4.8 magnesium transport protein MgtC compare
BWI76_RS01190 -1.4 -1.2 iron donor protein CyaY compare
BWI76_RS26665 -1.4 -2.5 DNA-binding response regulator compare
BWI76_RS11850 -1.4 -4.0 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS15565 -1.4 -4.0 hypothetical protein compare
BWI76_RS24400 -1.4 -3.2 outer membrane channel protein TolC compare
BWI76_RS05680 -1.4 -3.4 LacI family transcriptional regulator compare
BWI76_RS05120 -1.4 -4.8 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS16000 -1.4 -1.4 multidrug transporter subunit MdtI compare
BWI76_RS15515 -1.4 -6.3 hypothetical protein compare
BWI76_RS08020 -1.4 -4.1 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS17805 -1.4 -1.2 membrane protein compare
BWI76_RS01115 -1.4 -2.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS20155 -1.4 -1.0 NADH-quinone oxidoreductase subunit I compare
BWI76_RS01095 -1.4 -1.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS14240 -1.4 -1.5 thiol reductase thioredoxin compare
BWI76_RS06635 -1.3 -1.8 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS21475 -1.3 -2.2 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS12145 -1.3 -1.5 hypothetical protein compare
BWI76_RS01385 -1.3 -1.4 potassium transporter compare
BWI76_RS00990 -1.3 -7.4 ketol-acid reductoisomerase compare
BWI76_RS12105 -1.3 -2.6 hypothetical protein compare
BWI76_RS22940 -1.3 -1.8 DNA-binding transcriptional activator FucR compare
BWI76_RS25225 -1.3 -2.6 ABC transporter permease compare
BWI76_RS21260 -1.3 -3.5 two-component sensor histidine kinase compare
BWI76_RS11155 -1.3 -1.8 penicillin-binding protein activator LpoB compare
BWI76_RS09655 -1.3 -3.8 leucine-responsive regulatory protein compare
BWI76_RS19685 -1.3 -2.6 lysine transporter compare
BWI76_RS12340 -1.3 -3.1 molecular chaperone Tir compare
BWI76_RS23495 -1.3 -4.4 hypothetical protein compare
BWI76_RS24885 -1.3 -0.8 PTS galactitol transporter subunit IIB compare
BWI76_RS02775 -1.3 -2.5 outer membrane protein assembly factor compare
BWI76_RS15350 -1.3 -0.8 hypothetical protein compare
BWI76_RS00180 -1.3 -0.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS13560 -1.3 -0.6 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS09195 -1.3 -1.1 N-acetyltransferase compare
BWI76_RS15740 -1.3 -2.1 HNH endonuclease compare
BWI76_RS15660 -1.3 -1.4 hypothetical protein compare
BWI76_RS01185 -1.3 -0.8 adenylate cyclase compare
BWI76_RS20270 -1.3 -3.4 hypothetical protein compare
BWI76_RS10350 -1.2 -4.6 EamA family transporter compare
BWI76_RS00975 -1.2 -5.6 dihydroxy-acid dehydratase compare
BWI76_RS15835 -1.2 -1.3 hypothetical protein compare
BWI76_RS01200 -1.2 -0.7 diaminopimelate epimerase compare
BWI76_RS25285 -1.2 -0.8 HPr family phosphocarrier protein compare
BWI76_RS09650 -1.2 -4.2 hypothetical protein compare
BWI76_RS12220 -1.2 -5.4 hypothetical protein compare
BWI76_RS13545 -1.2 -0.9 N-acetyltransferase compare
BWI76_RS08040 -1.2 -1.3 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS01220 -1.2 -2.6 DNA-dependent helicase II compare
BWI76_RS24595 -1.2 -1.9 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS12230 -1.2 -3.7 hypothetical protein compare
BWI76_RS14170 -1.2 -1.8 hypothetical protein compare
BWI76_RS22420 -1.2 -1.3 LacI family transcriptional regulator compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Escherichia coli BW25113 3:1 starting OD to Klebsiella across organisms