Experiment set13IT043 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS09760 -4.8 -3.3 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23265 -4.6 -1.9 hypothetical protein compare
BWI76_RS08385 -4.5 -4.0 citrate (Si)-synthase compare
BWI76_RS19840 -4.5 -1.3 hypothetical protein compare
BWI76_RS20895 -4.4 -6.6 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS05015 -4.2 -2.5 transcriptional regulator compare
BWI76_RS08520 -4.2 -2.1 colicin transporter TolQ compare
BWI76_RS21475 -4.2 -4.0 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS05260 -4.2 -1.2 chaperone compare
BWI76_RS09335 -4.0 -1.2 baseplate assembly protein W compare
BWI76_RS01115 -3.8 -3.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS17980 -3.8 -4.7 RNA chaperone ProQ compare
BWI76_RS21070 -3.8 -1.9 outer membrane protein assembly factor BamB compare
BWI76_RS17975 -3.6 -6.1 tail-specific protease compare
BWI76_RS11845 -3.5 -2.8 tryptophan synthase subunit beta compare
BWI76_RS26460 -3.5 -3.4 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS20380 -3.3 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS24600 -3.2 -2.2 dihydroxyacetone kinase compare
BWI76_RS23920 -3.2 -2.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS04465 -3.2 -5.5 carbamoyl-phosphate synthase small subunit compare
BWI76_RS05840 -3.1 -4.1 glutamate 5-kinase compare
BWI76_RS26390 -3.1 -6.6 cell division protein FtsX compare
BWI76_RS01615 -3.0 -10.2 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS08525 -3.0 -2.9 colicin transporter compare
BWI76_RS22765 -3.0 -9.1 sulfite reductase subunit alpha compare
BWI76_RS27385 -3.0 -8.8 orotate phosphoribosyltransferase compare
BWI76_RS01610 -3.0 -12.1 phosphoribosylamine--glycine ligase compare
BWI76_RS25335 -2.9 -1.6 stringent starvation protein A compare
BWI76_RS20965 -2.9 -5.3 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS26470 -2.9 -4.2 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS20355 -2.9 -4.6 colicin V production protein compare
BWI76_RS09755 -2.8 -3.6 phosphoserine transaminase compare
BWI76_RS15825 -2.8 -1.1 hypothetical protein compare
BWI76_RS20350 -2.8 -10.5 amidophosphoribosyltransferase compare
BWI76_RS04645 -2.8 -3.7 3-dehydroquinase compare
BWI76_RS22755 -2.8 -4.4 phosphoadenosine phosphosulfate reductase compare
BWI76_RS09910 -2.7 -12.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS07070 -2.7 -5.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS24580 -2.7 -4.7 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS11965 -2.7 -3.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS07065 -2.7 -6.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS21465 -2.6 -6.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS01385 -2.6 -1.8 potassium transporter compare
BWI76_RS26570 -2.6 -2.8 anion permease compare
BWI76_RS00835 -2.6 -10.5 phosphoenolpyruvate carboxylase compare
BWI76_RS11860 -2.6 -12.4 anthranilate synthase component I compare
BWI76_RS25645 -2.6 -6.1 shikimate dehydrogenase compare
BWI76_RS05835 -2.5 -2.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS05120 -2.5 -6.9 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS07465 -2.5 -0.9 TetR family transcriptional regulator compare
BWI76_RS08210 -2.5 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS26455 -2.5 -2.4 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS01210 -2.5 -1.2 tyrosine recombinase XerC compare
BWI76_RS02995 -2.4 -6.1 aspartate carbamoyltransferase compare
BWI76_RS14300 -2.4 -2.0 hypothetical protein compare
BWI76_RS00990 -2.4 -9.8 ketol-acid reductoisomerase compare
BWI76_RS21265 -2.4 -12.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS16490 -2.4 -1.7 glutaredoxin compare
BWI76_RS01220 -2.4 -5.0 DNA-dependent helicase II compare
BWI76_RS23360 -2.4 -1.8 diaminopimelate decarboxylase compare
BWI76_RS26395 -2.4 -6.2 cell division protein FtsE compare
BWI76_RS18950 -2.3 -2.7 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS20440 -2.3 -4.0 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS04470 -2.3 -6.5 carbamoyl phosphate synthase large subunit compare
BWI76_RS11855 -2.3 -7.8 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS11840 -2.3 -5.8 tryptophan synthase subunit alpha compare
BWI76_RS18925 -2.3 -5.1 histidinol dehydrogenase compare
BWI76_RS27440 -2.3 -1.5 DNA helicase RecG compare
BWI76_RS05450 -2.2 -0.8 ribonuclease HI compare
BWI76_RS27390 -2.2 -6.6 ribonuclease PH compare
BWI76_RS24885 -2.2 -1.1 PTS galactitol transporter subunit IIB compare
BWI76_RS09730 -2.2 -0.9 pyruvate formate lyase 1-activating protein compare
BWI76_RS04160 -2.2 -2.6 phosphoserine phosphatase compare
BWI76_RS04255 -2.2 -9.2 threonine synthase compare
BWI76_RS20640 -2.2 -4.1 cysteine synthase A compare
BWI76_RS00400 -2.2 -1.1 glutamine synthetase compare
BWI76_RS08535 -2.2 -1.6 translocation protein TolB compare
BWI76_RS17720 -2.1 -0.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS12335 -2.1 -7.9 hypothetical protein compare
BWI76_RS21340 -2.1 -2.2 SoxR reducing system protein RseC compare
BWI76_RS09255 -2.1 -3.5 hypothetical protein compare
BWI76_RS10990 -2.1 -3.1 dihydroorotase compare
BWI76_RS21370 -2.1 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS08040 -2.0 -1.9 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS12870 -2.0 -2.2 putative phytanoyl-CoA dioxygenase compare
BWI76_RS06535 -2.0 -3.5 endopeptidase La compare
BWI76_RS11520 -2.0 -1.4 hypothetical protein compare
BWI76_RS00875 -2.0 -4.9 DNA-binding transcriptional regulator FabR compare
BWI76_RS11850 -2.0 -7.0 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS25280 -2.0 -1.2 RNase adaptor protein RapZ compare
BWI76_RS12495 -1.9 -1.1 2-Cys peroxiredoxin compare
BWI76_RS22805 -1.9 -6.5 GTP diphosphokinase compare
BWI76_RS09190 -1.9 -1.8 hypothetical protein compare
BWI76_RS01800 -1.9 -1.8 glucose-6-phosphate isomerase compare
BWI76_RS16895 -1.9 -1.7 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS24900 -1.9 -1.5 DeoR family transcriptional regulator compare
BWI76_RS04675 -1.9 -4.7 3-isopropylmalate dehydrogenase compare
BWI76_RS00095 -1.9 -2.4 DNA-binding transcriptional regulator compare
BWI76_RS18920 -1.9 -3.5 ATP phosphoribosyltransferase compare
BWI76_RS02725 -1.8 -1.0 HxlR family transcriptional regulator compare
BWI76_RS17300 -1.8 -0.7 tRNA-Tyr compare
BWI76_RS01125 -1.8 -4.8 4-alpha-L-fucosyltransferase compare
BWI76_RS18940 -1.8 -5.3 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS24605 -1.8 -4.7 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS08530 -1.8 -1.4 protein TolA compare
BWI76_RS22760 -1.8 -4.8 sulfite reductase subunit beta compare
BWI76_RS00975 -1.8 -6.5 dihydroxy-acid dehydratase compare
BWI76_RS09970 -1.8 -1.3 porin OmpA compare
BWI76_RS04250 -1.7 -6.0 homoserine kinase compare
BWI76_RS00965 -1.7 -0.8 acetolactate synthase 2 small subunit compare
BWI76_RS25070 -1.7 -1.2 hypothetical protein compare
BWI76_RS21460 -1.7 -1.1 translation inhibitor protein RaiA compare
BWI76_RS14320 -1.7 -1.7 hypothetical protein compare
BWI76_RS15110 -1.7 -5.2 putative excinuclease ABC subunit A compare
BWI76_RS16485 -1.7 -1.2 ribonuclease T compare
BWI76_RS00720 -1.7 -1.7 DNA-binding response regulator compare
BWI76_RS18930 -1.7 -4.4 histidinol-phosphate transaminase compare
BWI76_RS07510 -1.7 -2.1 hypothetical protein compare
BWI76_RS11255 -1.7 -2.0 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS02530 -1.7 -1.0 tRNA dimethylallyltransferase compare
BWI76_RS02815 -1.7 -1.3 fructose-bisphosphatase class I compare
BWI76_RS25870 -1.6 -1.0 elongation factor Tu compare
BWI76_RS12070 -1.6 -1.2 hypothetical protein compare
BWI76_RS26620 -1.6 -0.6 Fe-S biogenesis protein NfuA compare
BWI76_RS14075 -1.6 -1.9 TetR family transcriptional regulator compare
BWI76_RS18935 -1.6 -7.9 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS25065 -1.6 -3.1 polyribonucleotide nucleotidyltransferase compare
BWI76_RS23365 -1.6 -4.0 LysR family transcriptional regulator compare
BWI76_RS15115 -1.6 -1.1 MFS transporter compare
BWI76_RS10745 -1.6 -1.0 hypothetical protein compare
BWI76_RS04685 -1.6 -5.8 putative leucine operon leader peptide compare
BWI76_RS01135 -1.6 -3.6 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS26095 -1.6 -0.6 shikimate kinase compare
BWI76_RS21100 -1.6 -1.9 nucleoside-diphosphate kinase compare
BWI76_RS10935 -1.5 -4.1 glucan biosynthesis glucosyltransferase H compare
BWI76_RS12205 -1.5 -2.7 hypothetical protein compare
BWI76_RS17805 -1.5 -1.4 membrane protein compare
BWI76_RS21680 -1.5 -3.8 antitoxin of the YeeV-YeeU toxin-antitoxin system compare
BWI76_RS21235 -1.5 -0.6 hypothetical protein compare
BWI76_RS00715 -1.5 -1.0 two-component sensor histidine kinase compare
BWI76_RS22420 -1.5 -1.7 LacI family transcriptional regulator compare
BWI76_RS21350 -1.5 -1.6 anti-RNA polymerase sigma factor SigE compare
BWI76_RS13820 -1.5 -1.4 hypothetical protein compare
BWI76_RS01080 -1.5 -5.3 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS03660 -1.5 -2.9 hypothetical protein compare
BWI76_RS04245 -1.5 -8.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS04240 -1.5 -2.4 thr operon leader peptide compare
BWI76_RS09870 -1.5 -4.5 aromatic amino acid aminotransferase compare
BWI76_RS26075 -1.5 -1.0 DNA adenine methylase compare
BWI76_RS00985 -1.4 -5.3 transcriptional regulator IlvY compare
BWI76_RS00980 -1.4 -6.8 PLP-dependent threonine dehydratase compare
BWI76_RS25115 -1.4 -7.8 argininosuccinate synthase compare
BWI76_RS04705 -1.4 -2.5 DNA-binding transcriptional regulator FruR compare
BWI76_RS04665 -1.4 -9.0 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04670 -1.4 -6.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS16425 -1.4 -1.5 hypothetical protein compare
BWI76_RS12265 -1.4 -4.2 hypothetical protein compare
BWI76_RS08395 -1.4 -1.4 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS04680 -1.4 -7.7 2-isopropylmalate synthase compare
BWI76_RS18770 -1.4 -1.0 DNA gyrase inhibitor compare
BWI76_RS25960 -1.3 -2.0 NUDIX hydrolase compare
BWI76_RS07185 -1.3 -1.1 hypothetical protein compare
BWI76_RS00785 -1.3 -3.5 cystathionine gamma-synthase compare
BWI76_RS02775 -1.3 -4.1 outer membrane protein assembly factor compare
BWI76_RS00850 -1.3 -4.6 acetylglutamate kinase compare
BWI76_RS23490 -1.3 -4.1 fimbrial protein compare
BWI76_RS08110 -1.3 -2.5 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS21740 -1.3 -2.8 transcriptional regulator, LysR family protein compare
BWI76_RS08330 -1.3 -1.4 hypothetical protein compare
BWI76_RS10930 -1.3 -4.6 glucan biosynthesis protein G compare
BWI76_RS10575 -1.3 -1.0 polar amino acid ABC transporter permease compare
BWI76_RS12405 -1.3 -5.3 diguanylate phosphodiesterase compare
BWI76_RS12260 -1.3 -3.8 hypothetical protein compare
BWI76_RS23520 -1.2 -1.5 hypothetical protein compare
BWI76_RS17195 -1.2 -1.8 hypothetical protein compare
BWI76_RS02340 -1.2 -3.0 membrane protein FxsA compare
BWI76_RS13915 -1.2 -4.8 magnesium transport protein MgtC compare
BWI76_RS26670 -1.2 -4.3 two-component sensor histidine kinase compare
BWI76_RS13585 -1.2 -2.7 4-oxalocrotonate tautomerase compare
BWI76_RS25320 -1.2 -6.4 glutamate synthase compare
BWI76_RS01185 -1.2 -0.8 adenylate cyclase compare
BWI76_RS09655 -1.2 -2.3 leucine-responsive regulatory protein compare
BWI76_RS24740 -1.2 -2.1 GntR family transcriptional regulator compare
BWI76_RS12400 -1.2 -3.4 TetR family transcriptional regulator compare
BWI76_RS06730 -1.2 -1.8 lac repressor compare
BWI76_RS24400 -1.2 -3.0 outer membrane channel protein TolC compare
BWI76_RS00180 -1.2 -0.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS06490 -1.2 -4.3 cytochrome ubiquinol oxidase subunit I compare
BWI76_RS18165 -1.2 -1.2 NUDIX pyrophosphatase compare
BWI76_RS21115 -1.2 -1.7 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS20995 -1.2 -5.3 RNA degradosome polyphosphate kinase compare
BWI76_RS11205 -1.2 -2.4 transcription-repair coupling factor compare
BWI76_RS15590 -1.2 -4.5 hypothetical protein compare
BWI76_RS24920 -1.2 -1.9 YraN family protein compare
BWI76_RS25315 -1.2 -6.7 glutamate synthase large subunit compare
BWI76_RS00795 -1.2 -1.6 carboxymuconolactone decarboxylase compare
BWI76_RS01200 -1.2 -0.7 diaminopimelate epimerase compare
BWI76_RS04715 -1.2 -1.4 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS15705 -1.2 -2.8 putative holin protein compare
BWI76_RS01095 -1.1 -1.7 UDP-N-acetyl-D-mannosamine dehydrogenase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella across organisms