Experiment set13IT043 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS05075 +2.0 1.1 type II secretion system protein GspG compare
BWI76_RS18605 +1.9 2.2 oxidoreductase molybdopterin-binding protein compare
BWI76_RS11700 +1.4 1.9 hypothetical protein compare
BWI76_RS14770 +1.4 1.2 PTS IIA 2 domain protein compare
BWI76_RS09520 +1.4 3.2 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS16075 +1.3 2.1 oxidoreductase compare
BWI76_RS11675 +1.3 2.8 arginine N-succinyltransferase compare
BWI76_RS01995 +1.2 2.0 AraC family transcriptional regulator compare
BWI76_RS17400 +1.2 1.6 transporter compare
BWI76_RS01540 +1.2 3.0 thiamine biosynthesis protein ThiS compare
BWI76_RS25485 +1.2 2.2 septum formation protein Maf compare
BWI76_RS15035 +1.1 2.0 metal ABC transporter permease compare
BWI76_RS14840 +1.1 3.5 hypothetical protein compare
BWI76_RS24350 +1.1 1.7 quinol monooxygenase compare
BWI76_RS22090 +1.1 1.6 transcriptional regulator compare
BWI76_RS12550 +1.1 2.6 hypothetical protein compare
BWI76_RS23020 +1.1 1.7 cobalamin biosynthesis protein CbiQ compare
BWI76_RS27455 +1.1 2.2 DUF805 domain-containing protein compare
BWI76_RS21395 +1.1 2.5 DTW domain-containing protein compare
BWI76_RS00710 +1.0 1.2 6-N-hydroxylaminopurine resistance protein compare
BWI76_RS11335 +1.0 1.5 tautomerase compare
BWI76_RS13975 +1.0 1.9 urea carboxylase compare
BWI76_RS01195 +1.0 1.7 membrane protein compare
BWI76_RS26440 +1.0 0.9 hypothetical protein compare
BWI76_RS21220 +1.0 3.2 membrane protein compare
BWI76_RS11125 +1.0 1.6 metal-dependent hydrolase compare
BWI76_RS16170 +0.9 5.0 amidohydrolase compare
BWI76_RS25425 +0.9 0.5 arginine repressor compare
BWI76_RS05050 +0.9 2.0 general secretion pathway protein GspL compare
BWI76_RS20940 +0.9 2.1 uracil/xanthine transporter compare
BWI76_RS17645 +0.9 2.9 hypothetical protein compare
BWI76_RS14435 +0.9 1.3 glutamine ABC transporter ATP-binding protein compare
BWI76_RS18675 +0.9 1.4 fimbrial protein compare
BWI76_RS15290 +0.9 0.8 transcriptional regulator compare
BWI76_RS26405 +0.9 1.3 16S rRNA (guanine(966)-N(2))-methyltransferase compare
BWI76_RS05465 +0.9 1.1 amidohydrolase compare
BWI76_RS25945 +0.9 2.7 ABC transporter ATP-binding protein compare
BWI76_RS11645 +0.9 4.2 ABC transporter substrate-binding protein compare
BWI76_RS01675 +0.9 2.2 putative cytoplasmic protein compare
BWI76_RS13990 +0.9 5.2 allophanate hydrolase compare
BWI76_RS13645 +0.9 2.1 N-hydroxyarylamine O-acetyltransferase compare
BWI76_RS07985 +0.9 0.9 fluoride ion transporter CrcB compare
BWI76_RS18870 +0.8 1.5 protein NifZ compare
BWI76_RS17615 +0.8 1.8 RNA pseudouridine synthase compare
BWI76_RS16470 +0.8 1.5 transcriptional repressor NemR compare
BWI76_RS07475 +0.8 1.5 DNA-binding transcriptional regulator RamA compare
BWI76_RS10055 +0.8 1.2 AraC family transcriptional regulator compare
BWI76_RS03835 +0.8 2.7 4-hydroxyphenylacetate catabolism regulatory protein HpaA compare
BWI76_RS13330 +0.8 0.9 tellurite resistance methyltransferase TehB compare
BWI76_RS15235 +0.8 3.1 hypothetical protein compare
BWI76_RS10870 +0.8 2.8 nicotinamidase compare
BWI76_RS13955 +0.8 1.3 hypothetical protein compare
BWI76_RS11260 +0.8 1.4 hypothetical protein compare
BWI76_RS06340 +0.8 1.9 hypothetical protein compare
BWI76_RS07255 +0.8 1.3 hypothetical protein compare
BWI76_RS16815 +0.8 1.3 periplasmic binding protein compare
BWI76_RS24280 +0.8 2.4 biopolymer transporter ExbB compare
BWI76_RS11525 +0.8 1.9 HNH endonuclease compare
BWI76_RS20900 +0.8 1.0 outer membrane protein assembly factor BamC compare
BWI76_RS14450 +0.8 2.4 hypothetical protein compare
BWI76_RS21445 +0.8 1.5 hypothetical protein compare
BWI76_RS02585 +0.8 3.4 hypothetical protein compare
BWI76_RS16175 +0.8 3.5 p-aminobenzoyl-glutamate transporter compare
BWI76_RS10040 +0.8 2.0 heat-shock protein HspQ compare
BWI76_RS07790 +0.7 1.5 plasmid stabilization protein compare
BWI76_RS11185 +0.7 2.9 ligand-gated channel protein compare
BWI76_RS27425 +0.7 1.1 DNA-directed RNA polymerase subunit omega compare
BWI76_RS22270 +0.7 3.1 nickel transporter compare
BWI76_RS23120 +0.7 1.6 propanediol dehydratase medium subunit compare
BWI76_RS16315 +0.7 0.8 SirA-like protein compare
BWI76_RS10835 +0.7 0.8 hypothetical protein compare
BWI76_RS26480 +0.7 4.0 undecaprenyl-phosphate 4-deoxy-4-formamido-L-arabinose transferase compare
BWI76_RS13095 +0.7 1.5 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS10895 +0.7 2.8 phosphatase compare
BWI76_RS06335 +0.7 2.4 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS13420 +0.7 1.1 ABC transporter permease compare
BWI76_RS26185 +0.7 1.3 thiosulfate sulfurtransferase compare
BWI76_RS06075 +0.7 2.2 taurine transporter subunit compare
BWI76_RS04840 +0.7 2.1 prepilin peptidase-dependent pilin compare
BWI76_RS25935 +0.7 2.8 glutathione-regulated potassium-efflux system ancillary protein KefG compare
BWI76_RS07540 +0.7 2.3 dipeptide ABC transporter ATP-binding protein DppD compare
BWI76_RS14030 +0.7 1.7 ABC transporter permease compare
BWI76_RS06295 +0.7 1.5 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS27200 +0.7 2.0 tRNA (uridine(34)/cytosine(34)/5- carboxymethylaminomethyluridine(34)-2'-O)- methyltransferase TrmL compare
BWI76_RS22210 +0.7 2.6 murein transglycosylase B compare
BWI76_RS09765 +0.7 1.2 metalloprotease compare
BWI76_RS20785 +0.7 0.7 ethanolamine utilization protein EutJ compare
BWI76_RS20930 +0.7 1.5 arsenate reductase (glutaredoxin) compare
BWI76_RS25855 +0.7 2.1 bacterioferritin compare
BWI76_RS04915 +0.7 2.8 hypothetical protein compare
BWI76_RS20790 +0.7 3.3 aldehyde dehydrogenase compare
BWI76_RS19215 +0.7 1.0 proline-specific peptidase compare
BWI76_RS18610 +0.7 2.7 transcriptional regulator LysR compare
BWI76_RS15960 +0.7 2.8 LysR family transcriptional regulator compare
BWI76_RS12500 +0.7 1.8 dipeptide epimerase compare
BWI76_RS20375 +0.7 1.1 membrane protein compare
BWI76_RS11680 +0.7 2.5 succinylglutamate-semialdehyde dehydrogenase compare
BWI76_RS24770 +0.7 1.8 hypothetical protein compare
BWI76_RS12480 +0.7 2.8 TIGR01620 family protein compare
BWI76_RS20285 +0.7 3.0 glutathione S-transferase compare
BWI76_RS06505 +0.7 4.2 hypothetical protein compare
BWI76_RS09050 +0.7 1.8 MFS transporter compare
BWI76_RS07865 +0.7 2.2 methylthioribulose 1-phosphate dehydratase compare
BWI76_RS17110 +0.7 1.6 vitamin B12 ABC transporter permease BtuC compare
BWI76_RS16510 +0.7 2.1 transcriptional repressor PurR compare
BWI76_RS13600 +0.7 1.3 hypothetical protein compare
BWI76_RS16030 +0.7 1.2 malonate decarboxylase acyl carrier protein compare
BWI76_RS14750 +0.7 2.5 transcriptional regulator compare
BWI76_RS23015 +0.7 1.1 cobalt transporter ATP-binding subunit compare
BWI76_RS11825 +0.7 2.7 LysR family transcriptional regulator compare
BWI76_RS21200 +0.7 1.7 aldose epimerase compare
BWI76_RS08770 +0.7 3.2 malonyl-ACP O-methyltransferase BioC compare
BWI76_RS27825 +0.7 2.3 hypothetical protein compare
BWI76_RS15285 +0.7 2.2 stress protection protein MarC compare
BWI76_RS02800 +0.7 2.5 ABC transporter compare
BWI76_RS18385 +0.7 1.0 hypothetical protein compare
BWI76_RS13965 +0.7 1.2 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS18060 +0.6 1.0 hypothetical protein compare
BWI76_RS03620 +0.6 2.2 TetR family transcriptional regulator compare
BWI76_RS20295 +0.6 1.8 dihydroneopterin triphosphate 2'-epimerase compare
BWI76_RS23005 +0.6 1.2 bifunctional adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS14515 +0.6 3.5 yersiniabactin-iron ABC transporter permease ATP-binding protein YbtQ compare
BWI76_RS22645 +0.6 2.2 RNA polymerase sigma factor RpoS compare
BWI76_RS07380 +0.6 1.3 hypothetical protein compare
BWI76_RS12860 +0.6 1.2 hypothetical protein compare
BWI76_RS19230 +0.6 2.1 polar amino acid ABC transporter inner membrane subunit compare
BWI76_RS19865 +0.6 1.6 ecotin compare
BWI76_RS04985 +0.6 1.8 aspartate 1-decarboxylase compare
BWI76_RS13215 +0.6 1.2 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS09065 +0.6 2.8 sugar phosphatase SupH compare
BWI76_RS07735 +0.6 2.9 MFS transporter compare
BWI76_RS23515 +0.6 0.9 antibiotic biosynthesis monooxygenase compare
BWI76_RS19890 +0.6 2.0 alpha-ketoglutarate-dependent dioxygenase AlkB compare
BWI76_RS22280 +0.6 2.3 formate dehydrogenase-H ferredoxin subunit compare
BWI76_RS06060 +0.6 2.0 DNA-binding response regulator compare
BWI76_RS04905 +0.6 1.4 DUF3300 domain-containing protein compare
BWI76_RS16080 +0.6 2.2 LysR family transcriptional regulator compare
BWI76_RS20045 +0.6 3.2 hypothetical protein compare
BWI76_RS23960 +0.6 2.4 oxidative stress defense protein compare
BWI76_RS24745 +0.6 2.3 membrane protein compare
BWI76_RS24880 +0.6 1.5 PTS galactitol transporter subunit IIA compare
BWI76_RS12580 +0.6 1.6 oxidoreductase compare
BWI76_RS16660 +0.6 1.7 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS16505 +0.6 1.5 MFS transporter compare
BWI76_RS20880 +0.6 1.1 esterase compare
BWI76_RS08640 +0.6 1.3 multidrug efflux pump-associated protein, AcrZ family compare
BWI76_RS19330 +0.6 0.6 HAD family hydrolase compare
BWI76_RS10665 +0.6 1.6 PTS system fructose-like transporter subunit EIIB compare
BWI76_RS12440 +0.6 2.6 MFS transporter compare
BWI76_RS14035 +0.6 2.7 ABC transporter ATPase compare
BWI76_RS13570 +0.6 2.9 mandelate racemase/muconate lactonizing protein compare
BWI76_RS05800 +0.6 1.4 phage transcriptional activator, Ogr/delta compare
BWI76_RS17200 +0.6 1.6 hypothetical protein compare
BWI76_RS21195 +0.6 3.6 3-phenylpropionic acid transporter compare
BWI76_RS03180 +0.6 1.7 phage transcriptional regulator, AlpA compare
BWI76_RS13625 +0.6 2.0 hypothetical protein compare
BWI76_RS01690 +0.6 2.2 membrane protein compare
BWI76_RS22215 +0.6 1.9 PTS sorbitol transporter subunit IIC compare
BWI76_RS11460 +0.6 1.7 DUF441 family protein compare
BWI76_RS10595 +0.6 2.7 allantoate amidohydrolase compare
BWI76_RS22450 +0.6 1.2 selenoprotein W-related protein compare
BWI76_RS24070 +0.6 2.2 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
BWI76_RS15265 +0.6 2.4 hypothetical protein compare
BWI76_RS16000 +0.6 1.0 multidrug transporter subunit MdtI compare
BWI76_RS24270 +0.6 1.8 membrane protein compare
BWI76_RS22620 +0.6 1.7 3-octaprenyl-4-hydroxybenzoate carboxy-lyase compare
BWI76_RS01630 +0.6 0.5 16S ribosomal RNA compare
BWI76_RS20775 +0.6 3.3 ethanolamine utilization protein EutH compare
BWI76_RS21470 +0.6 1.6 gluconolaconase compare
BWI76_RS11655 +0.6 2.3 TVP38/TMEM64 family protein compare
BWI76_RS12585 +0.6 2.5 transcriptional regulator compare
BWI76_RS20720 +0.6 0.8 hypothetical protein compare
BWI76_RS03605 +0.6 1.5 BMC domain-containing protein compare
BWI76_RS08910 +0.6 2.2 transketolase domain-containing protein compare
BWI76_RS19585 +0.6 0.9 gentisate 1,2-dioxygenase compare
BWI76_RS16745 +0.6 3.6 alpha-acetolactate decarboxylase compare
BWI76_RS15475 +0.6 2.2 NAD(P)-dependent oxidoreductase compare
BWI76_RS20780 +0.6 2.7 alcohol dehydrogenase EutG compare
BWI76_RS25160 +0.6 1.3 transcription elongation factor GreA compare
BWI76_RS24955 +0.6 1.5 hypothetical protein compare
BWI76_RS04545 +0.6 2.5 two-component response regulator for citrate compare
BWI76_RS04095 +0.6 1.6 dUMP phosphatase compare
BWI76_RS20635 +0.6 1.9 sulfate transporter CysZ compare
BWI76_RS18900 +0.6 3.1 protein NifQ compare
BWI76_RS16290 +0.6 2.2 Mal regulon transcriptional regulator MalI compare
BWI76_RS05510 +0.6 1.9 NADH:ubiquinone reductase (Na(+)-transporting) subunit E compare
BWI76_RS18575 +0.6 1.8 transcriptional regulator compare
BWI76_RS03040 +0.6 2.0 leucyl aminopeptidase compare
BWI76_RS12615 +0.6 2.6 LysR family transcriptional regulator compare
BWI76_RS04600 +0.6 2.3 inner membrane protein compare
BWI76_RS13325 +0.6 2.2 dicarboxylate transporter/tellurite-resistance protein TehA compare
BWI76_RS23670 +0.6 1.9 alkaline phosphatase compare
BWI76_RS13405 +0.6 1.8 spermidine/putrescine ABC transporter substrate-binding protein compare
BWI76_RS09830 +0.6 1.3 tRNA uridine 5-oxyacetic acid(34) methyltransferase CmoM compare
BWI76_RS14055 +0.6 2.0 LacI family transcriptional regulator compare
BWI76_RS24825 +0.6 1.1 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS22290 +0.6 3.3 PTS cellobiose/arbutin/salicin transporter subunit IIBC compare
BWI76_RS02860 +0.6 1.4 glycine dehydrogenase compare
BWI76_RS04655 +0.6 2.1 shikimate dehydrogenase compare
BWI76_RS22235 +0.5 1.3 transcriptional regulator GutM compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Cupriavidus sp. AnTP704 3:1 starting OD to Klebsiella across organisms