Experiment set13IT042 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS20355 -5.8 -3.1 colicin V production protein compare
BWI76_RS26460 -5.1 -5.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.9 -2.0 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS09760 -4.7 -3.2 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23265 -4.7 -1.9 hypothetical protein compare
BWI76_RS17980 -4.6 -5.6 RNA chaperone ProQ compare
BWI76_RS04250 -4.5 -9.3 homoserine kinase compare
BWI76_RS19840 -4.5 -1.3 hypothetical protein compare
BWI76_RS05015 -4.3 -2.4 transcriptional regulator compare
BWI76_RS04160 -4.2 -2.9 phosphoserine phosphatase compare
BWI76_RS10990 -4.1 -1.8 dihydroorotase compare
BWI76_RS04470 -4.0 -10.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS21070 -3.8 -1.8 outer membrane protein assembly factor BamB compare
BWI76_RS08525 -3.8 -2.7 colicin transporter compare
BWI76_RS09645 -3.7 -1.1 thioredoxin-disulfide reductase compare
BWI76_RS00855 -3.7 -8.1 argininosuccinate lyase compare
BWI76_RS04465 -3.6 -6.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS01615 -3.6 -11.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS07070 -3.6 -4.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS04255 -3.5 -13.4 threonine synthase compare
BWI76_RS18930 -3.5 -5.2 histidinol-phosphate transaminase compare
BWI76_RS07065 -3.5 -8.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS16965 -3.5 -2.8 murein lipoprotein compare
BWI76_RS05835 -3.4 -2.0 gamma-glutamyl-phosphate reductase compare
BWI76_RS25115 -3.4 -8.1 argininosuccinate synthase compare
BWI76_RS08520 -3.4 -1.9 colicin transporter TolQ compare
BWI76_RS04245 -3.2 -13.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23220 -3.2 -8.1 amino-acid N-acetyltransferase compare
BWI76_RS05840 -3.1 -3.8 glutamate 5-kinase compare
BWI76_RS08535 -3.0 -1.8 translocation protein TolB compare
BWI76_RS20350 -3.0 -5.8 amidophosphoribosyltransferase compare
BWI76_RS01115 -2.9 -2.6 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS21265 -2.9 -14.3 phosphoribosylformylglycinamidine synthase compare
BWI76_RS27385 -2.9 -7.4 orotate phosphoribosyltransferase compare
BWI76_RS22765 -2.9 -8.1 sulfite reductase subunit alpha compare
BWI76_RS01610 -2.9 -11.1 phosphoribosylamine--glycine ligase compare
BWI76_RS08385 -2.9 -3.5 citrate (Si)-synthase compare
BWI76_RS03010 -2.9 -7.5 ornithine carbamoyltransferase compare
BWI76_RS00845 -2.9 -9.3 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS11840 -2.8 -5.4 tryptophan synthase subunit alpha compare
BWI76_RS00875 -2.8 -6.5 DNA-binding transcriptional regulator FabR compare
BWI76_RS20895 -2.8 -4.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS09910 -2.8 -14.0 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS12070 -2.8 -1.4 hypothetical protein compare
BWI76_RS22755 -2.8 -4.8 phosphoadenosine phosphosulfate reductase compare
BWI76_RS27390 -2.7 -7.8 ribonuclease PH compare
BWI76_RS11965 -2.7 -4.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01220 -2.7 -5.3 DNA-dependent helicase II compare
BWI76_RS15350 -2.7 -1.1 hypothetical protein compare
BWI76_RS17975 -2.7 -4.4 tail-specific protease compare
BWI76_RS01800 -2.7 -2.5 glucose-6-phosphate isomerase compare
BWI76_RS00835 -2.7 -12.1 phosphoenolpyruvate carboxylase compare
BWI76_RS26390 -2.7 -8.8 cell division protein FtsX compare
BWI76_RS21690 -2.6 -2.2 hypothetical protein compare
BWI76_RS26395 -2.6 -6.7 cell division protein FtsE compare
BWI76_RS01095 -2.6 -3.0 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS06535 -2.6 -3.2 endopeptidase La compare
BWI76_RS01210 -2.6 -1.2 tyrosine recombinase XerC compare
BWI76_RS08210 -2.6 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS07465 -2.5 -0.9 TetR family transcriptional regulator compare
BWI76_RS00345 -2.5 -4.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS18935 -2.5 -7.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS11845 -2.4 -3.1 tryptophan synthase subunit beta compare
BWI76_RS20965 -2.4 -2.5 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS18815 -2.4 -2.9 nitrogenase molybdenum-iron protein alpha chain compare
BWI76_RS18940 -2.4 -7.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS02995 -2.3 -8.1 aspartate carbamoyltransferase compare
BWI76_RS15845 -2.3 -0.9 hypothetical protein compare
BWI76_RS00990 -2.3 -9.5 ketol-acid reductoisomerase compare
BWI76_RS11860 -2.3 -5.7 anthranilate synthase component I compare
BWI76_RS00850 -2.3 -5.7 acetylglutamate kinase compare
BWI76_RS00400 -2.3 -1.1 glutamine synthetase compare
BWI76_RS11850 -2.2 -6.4 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS21075 -2.2 -1.3 membrane protein compare
BWI76_RS23365 -2.2 -4.1 LysR family transcriptional regulator compare
BWI76_RS27440 -2.1 -2.0 DNA helicase RecG compare
BWI76_RS08530 -2.1 -1.4 protein TolA compare
BWI76_RS18920 -2.1 -3.3 ATP phosphoribosyltransferase compare
BWI76_RS24580 -2.1 -4.9 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS04525 -2.1 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS27425 -2.1 -1.7 DNA-directed RNA polymerase subunit omega compare
BWI76_RS21370 -2.1 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS20380 -2.1 -0.8 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS17720 -2.1 -0.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS04240 -2.0 -2.9 thr operon leader peptide compare
BWI76_RS18950 -2.0 -5.2 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS18955 -2.0 -3.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS19010 -2.0 -2.3 polysaccharide pyruvyl transferase yvff compare
BWI76_RS11255 -2.0 -1.7 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS24900 -2.0 -1.5 DeoR family transcriptional regulator compare
BWI76_RS25645 -2.0 -5.7 shikimate dehydrogenase compare
BWI76_RS26570 -2.0 -1.9 anion permease compare
BWI76_RS23360 -1.9 -1.7 diaminopimelate decarboxylase compare
BWI76_RS09670 -1.9 -2.5 recombination factor protein RarA compare
BWI76_RS09970 -1.9 -1.2 porin OmpA compare
BWI76_RS18925 -1.9 -6.8 histidinol dehydrogenase compare
BWI76_RS00975 -1.9 -7.5 dihydroxy-acid dehydratase compare
BWI76_RS15110 -1.9 -4.5 putative excinuclease ABC subunit A compare
BWI76_RS23920 -1.9 -2.1 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS25700 -1.9 -6.3 heavy metal-responsive transcriptional regulator compare
BWI76_RS21475 -1.9 -3.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS24595 -1.9 -2.8 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS09650 -1.9 -4.6 hypothetical protein compare
BWI76_RS00965 -1.8 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS05120 -1.8 -7.1 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS25060 -1.8 -3.7 lipoprotein NlpI compare
BWI76_RS01080 -1.8 -6.0 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS00980 -1.8 -7.4 PLP-dependent threonine dehydratase compare
BWI76_RS04715 -1.8 -2.3 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS13755 -1.8 -1.2 hypothetical protein compare
BWI76_RS14065 -1.8 -1.9 hypothetical protein compare
BWI76_RS24605 -1.8 -4.8 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS14075 -1.8 -1.8 TetR family transcriptional regulator compare
BWI76_RS02530 -1.8 -1.1 tRNA dimethylallyltransferase compare
BWI76_RS07185 -1.8 -1.1 hypothetical protein compare
BWI76_RS22805 -1.7 -8.0 GTP diphosphokinase compare
BWI76_RS26620 -1.7 -0.7 Fe-S biogenesis protein NfuA compare
BWI76_RS23480 -1.7 -12.9 EAL domain-containing protein compare
BWI76_RS24740 -1.7 -1.6 GntR family transcriptional regulator compare
BWI76_RS26095 -1.7 -0.6 shikimate kinase compare
BWI76_RS04645 -1.7 -2.9 3-dehydroquinase compare
BWI76_RS21100 -1.7 -2.1 nucleoside-diphosphate kinase compare
BWI76_RS26670 -1.6 -6.4 two-component sensor histidine kinase compare
BWI76_RS26665 -1.6 -2.8 DNA-binding response regulator compare
BWI76_RS00715 -1.6 -1.1 two-component sensor histidine kinase compare
BWI76_RS05450 -1.6 -0.7 ribonuclease HI compare
BWI76_RS04670 -1.6 -7.3 3-isopropylmalate dehydratase large subunit compare
BWI76_RS15680 -1.6 -3.6 hypothetical protein compare
BWI76_RS09755 -1.6 -2.5 phosphoserine transaminase compare
BWI76_RS02340 -1.6 -5.3 membrane protein FxsA compare
BWI76_RS09655 -1.6 -3.7 leucine-responsive regulatory protein compare
BWI76_RS21310 -1.6 -0.7 DNA repair protein RecO compare
BWI76_RS25920 -1.6 -1.1 peptidylprolyl isomerase compare
BWI76_RS25300 -1.6 -2.7 hybrid sensor histidine kinase/response regulator compare
BWI76_RS16920 -1.5 -1.1 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS04675 -1.5 -3.5 3-isopropylmalate dehydrogenase compare
BWI76_RS19685 -1.5 -3.6 lysine transporter compare
BWI76_RS12265 -1.5 -4.1 hypothetical protein compare
BWI76_RS04680 -1.5 -9.0 2-isopropylmalate synthase compare
BWI76_RS23490 -1.5 -5.4 fimbrial protein compare
BWI76_RS01135 -1.5 -3.6 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS01655 -1.5 -6.1 homoserine O-succinyltransferase compare
BWI76_RS21350 -1.5 -1.7 anti-RNA polymerase sigma factor SigE compare
BWI76_RS04665 -1.5 -10.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS00785 -1.5 -4.4 cystathionine gamma-synthase compare
BWI76_RS05915 -1.5 -2.0 helix-turn-helix transcriptional regulator compare
BWI76_RS09870 -1.5 -4.3 aromatic amino acid aminotransferase compare
BWI76_RS02550 -1.4 -4.0 protease modulator HflC compare
BWI76_RS17290 -1.4 -2.9 formyltetrahydrofolate deformylase compare
BWI76_RS13920 -1.4 -6.1 magnesium-translocating P-type ATPase compare
BWI76_RS22760 -1.4 -4.1 sulfite reductase subunit beta compare
BWI76_RS22420 -1.4 -2.1 LacI family transcriptional regulator compare
BWI76_RS12230 -1.4 -5.6 hypothetical protein compare
BWI76_RS09190 -1.4 -2.0 hypothetical protein compare
BWI76_RS06405 -1.4 -2.1 2-dehydropantoate 2-reductase compare
BWI76_RS15565 -1.4 -4.3 hypothetical protein compare
BWI76_RS25070 -1.4 -1.0 hypothetical protein compare
BWI76_RS13595 -1.4 -4.2 transcriptional regulator compare
BWI76_RS13915 -1.4 -5.5 magnesium transport protein MgtC compare
BWI76_RS00805 -1.4 -4.8 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS03660 -1.4 -2.8 hypothetical protein compare
BWI76_RS02735 -1.4 -2.6 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS21565 -1.4 -0.7 outer membrane protein assembly factor BamE compare
BWI76_RS16425 -1.4 -1.1 hypothetical protein compare
BWI76_RS15590 -1.4 -3.1 hypothetical protein compare
BWI76_RS12290 -1.4 -4.6 hypothetical protein compare
BWI76_RS15115 -1.4 -1.3 MFS transporter compare
BWI76_RS12145 -1.3 -1.5 hypothetical protein compare
BWI76_RS02775 -1.3 -3.6 outer membrane protein assembly factor compare
BWI76_RS15835 -1.3 -1.5 hypothetical protein compare
BWI76_RS15740 -1.3 -2.3 HNH endonuclease compare
BWI76_RS26075 -1.3 -1.2 DNA adenine methylase compare
BWI76_RS05880 -1.3 -1.2 AraC-type DNA-binding domain-containing protein compare
BWI76_RS00180 -1.3 -0.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS12335 -1.3 -5.5 hypothetical protein compare
BWI76_RS01185 -1.3 -0.9 adenylate cyclase compare
BWI76_RS08020 -1.3 -4.8 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS20270 -1.3 -4.6 hypothetical protein compare
BWI76_RS21780 -1.3 -3.0 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS10930 -1.3 -4.1 glucan biosynthesis protein G compare
BWI76_RS10575 -1.3 -0.9 polar amino acid ABC transporter permease compare
BWI76_RS12340 -1.3 -2.7 molecular chaperone Tir compare
BWI76_RS21250 -1.3 -2.9 two-component system response regulator GlrR compare
BWI76_RS25960 -1.3 -2.3 NUDIX hydrolase compare
BWI76_RS12200 -1.3 -1.6 hypothetical protein compare
BWI76_RS15195 -1.3 -1.2 DUF4186 domain-containing protein compare
BWI76_RS13025 -1.3 -2.2 histidine phosphatase family protein compare
BWI76_RS17805 -1.3 -1.2 membrane protein compare
BWI76_RS01200 -1.3 -0.8 diaminopimelate epimerase compare
BWI76_RS12220 -1.3 -5.6 hypothetical protein compare
BWI76_RS12375 -1.3 -2.1 DNA-invertase hin compare
BWI76_RS01125 -1.3 -4.7 4-alpha-L-fucosyltransferase compare
BWI76_RS04685 -1.2 -5.7 putative leucine operon leader peptide compare
BWI76_RS20640 -1.2 -2.5 cysteine synthase A compare
BWI76_RS15515 -1.2 -6.1 hypothetical protein compare
BWI76_RS08605 -1.2 -1.3 phosphoglyceromutase compare
BWI76_RS25285 -1.2 -0.9 HPr family phosphocarrier protein compare
BWI76_RS09825 -1.2 -2.6 envelope biogenesis factor ElyC compare
BWI76_RS16275 -1.2 -1.9 fumarate hydratase FumA compare
BWI76_RS25065 -1.2 -2.0 polyribonucleotide nucleotidyltransferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Pseudomonas simiae WCS417 3:1 starting OD to Klebsiella across organisms