Experiment set13IT040 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS01115 -6.4 -3.2 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS26460 -5.9 -4.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26455 -4.9 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS09760 -4.9 -3.4 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS23265 -4.8 -2.0 hypothetical protein compare
BWI76_RS19840 -4.6 -1.4 hypothetical protein compare
BWI76_RS12090 -4.6 -2.3 HNH endonuclease compare
BWI76_RS05015 -4.4 -2.6 transcriptional regulator compare
BWI76_RS08520 -4.4 -2.2 colicin transporter TolQ compare
BWI76_RS17980 -4.3 -7.2 RNA chaperone ProQ compare
BWI76_RS20355 -4.3 -4.4 colicin V production protein compare
BWI76_RS17975 -4.2 -6.7 tail-specific protease compare
BWI76_RS02995 -4.2 -10.2 aspartate carbamoyltransferase compare
BWI76_RS08525 -4.0 -2.9 colicin transporter compare
BWI76_RS10990 -4.0 -2.7 dihydroorotase compare
BWI76_RS09645 -3.9 -1.2 thioredoxin-disulfide reductase compare
BWI76_RS04160 -3.6 -3.9 phosphoserine phosphatase compare
BWI76_RS09755 -3.6 -2.5 phosphoserine transaminase compare
BWI76_RS11965 -3.6 -5.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS26570 -3.3 -2.2 anion permease compare
BWI76_RS04465 -3.3 -6.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS21070 -3.3 -1.9 outer membrane protein assembly factor BamB compare
BWI76_RS07070 -3.2 -6.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS05120 -3.2 -8.3 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS00875 -3.2 -6.8 DNA-binding transcriptional regulator FabR compare
BWI76_RS24580 -3.1 -4.7 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS25335 -3.1 -2.2 stringent starvation protein A compare
BWI76_RS08385 -3.1 -4.0 citrate (Si)-synthase compare
BWI76_RS20360 -3.1 -0.9 cell division protein DedD compare
BWI76_RS04470 -3.1 -9.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS01800 -3.0 -2.1 glucose-6-phosphate isomerase compare
BWI76_RS01350 -3.0 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS04645 -3.0 -4.0 3-dehydroquinase compare
BWI76_RS09335 -2.9 -1.2 baseplate assembly protein W compare
BWI76_RS21235 -2.9 -0.9 hypothetical protein compare
BWI76_RS15825 -2.9 -1.2 hypothetical protein compare
BWI76_RS26390 -2.8 -10.5 cell division protein FtsX compare
BWI76_RS23920 -2.8 -3.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09625 -2.8 -1.4 hypothetical protein compare
BWI76_RS22755 -2.8 -5.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS06535 -2.7 -3.2 endopeptidase La compare
BWI76_RS20350 -2.7 -6.5 amidophosphoribosyltransferase compare
BWI76_RS07065 -2.7 -7.5 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS08210 -2.7 -1.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS01210 -2.6 -1.3 tyrosine recombinase XerC compare
BWI76_RS07465 -2.6 -1.0 TetR family transcriptional regulator compare
BWI76_RS20895 -2.6 -5.0 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS01610 -2.5 -10.1 phosphoribosylamine--glycine ligase compare
BWI76_RS01615 -2.5 -10.0 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS26395 -2.5 -5.3 cell division protein FtsE compare
BWI76_RS09910 -2.5 -14.2 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS21265 -2.5 -11.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01065 -2.4 -3.2 ATP-dependent RNA helicase RhlB compare
BWI76_RS22765 -2.4 -9.3 sulfite reductase subunit alpha compare
BWI76_RS27385 -2.4 -9.9 orotate phosphoribosyltransferase compare
BWI76_RS05450 -2.4 -0.9 ribonuclease HI compare
BWI76_RS08535 -2.3 -1.8 translocation protein TolB compare
BWI76_RS16490 -2.3 -1.8 glutaredoxin compare
BWI76_RS00400 -2.3 -1.2 glutamine synthetase compare
BWI76_RS01095 -2.3 -2.6 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS15110 -2.3 -4.0 putative excinuclease ABC subunit A compare
BWI76_RS16965 -2.3 -2.9 murein lipoprotein compare
BWI76_RS02815 -2.3 -1.6 fructose-bisphosphatase class I compare
BWI76_RS17720 -2.2 -0.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS01110 -2.2 -3.8 TDP-fucosamine acetyltransferase compare
BWI76_RS00355 -2.2 -2.1 DNA polymerase I compare
BWI76_RS26470 -2.2 -5.0 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS01220 -2.1 -6.1 DNA-dependent helicase II compare
BWI76_RS19010 -2.1 -2.5 polysaccharide pyruvyl transferase yvff compare
BWI76_RS24900 -2.1 -1.5 DeoR family transcriptional regulator compare
BWI76_RS24595 -2.1 -3.0 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS05260 -2.1 -1.2 chaperone compare
BWI76_RS25920 -2.1 -1.6 peptidylprolyl isomerase compare
BWI76_RS04715 -2.1 -2.4 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS23360 -2.1 -1.9 diaminopimelate decarboxylase compare
BWI76_RS27390 -2.1 -5.9 ribonuclease PH compare
BWI76_RS20965 -2.0 -4.8 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS09190 -2.0 -1.9 hypothetical protein compare
BWI76_RS25065 -2.0 -3.4 polyribonucleotide nucleotidyltransferase compare
BWI76_RS08530 -1.9 -1.4 protein TolA compare
BWI76_RS23490 -1.9 -6.5 fimbrial protein compare
BWI76_RS07185 -1.9 -1.2 hypothetical protein compare
BWI76_RS05840 -1.8 -2.4 glutamate 5-kinase compare
BWI76_RS00835 -1.8 -8.0 phosphoenolpyruvate carboxylase compare
BWI76_RS10935 -1.8 -4.4 glucan biosynthesis glucosyltransferase H compare
BWI76_RS02530 -1.8 -1.1 tRNA dimethylallyltransferase compare
BWI76_RS22690 -1.8 -2.2 adenylyl-sulfate kinase compare
BWI76_RS21580 -1.8 -0.9 SsrA-binding protein compare
BWI76_RS21100 -1.7 -2.2 nucleoside-diphosphate kinase compare
BWI76_RS10835 -1.7 -1.2 hypothetical protein compare
BWI76_RS26095 -1.7 -0.7 shikimate kinase compare
BWI76_RS21570 -1.7 -2.4 RnfH family protein compare
BWI76_RS00715 -1.7 -1.1 two-component sensor histidine kinase compare
BWI76_RS02735 -1.7 -1.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS19495 -1.6 -1.1 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS12265 -1.6 -5.1 hypothetical protein compare
BWI76_RS24605 -1.6 -4.8 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS25060 -1.6 -5.0 lipoprotein NlpI compare
BWI76_RS09970 -1.6 -1.3 porin OmpA compare
BWI76_RS16425 -1.6 -2.4 hypothetical protein compare
BWI76_RS18455 -1.6 -1.0 tRNA-Ser compare
BWI76_RS04255 -1.6 -7.6 threonine synthase compare
BWI76_RS04525 -1.6 -1.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS09640 -1.6 -2.1 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS24400 -1.5 -3.6 outer membrane channel protein TolC compare
BWI76_RS19730 -1.5 -2.6 1-phosphofructokinase compare
BWI76_RS22805 -1.5 -7.0 GTP diphosphokinase compare
BWI76_RS21165 -1.5 -1.4 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS21350 -1.5 -1.1 anti-RNA polymerase sigma factor SigE compare
BWI76_RS21690 -1.5 -2.2 hypothetical protein compare
BWI76_RS19870 -1.5 -1.9 malate:quinone oxidoreductase compare
BWI76_RS26670 -1.5 -6.1 two-component sensor histidine kinase compare
BWI76_RS04240 -1.5 -2.8 thr operon leader peptide compare
BWI76_RS26665 -1.5 -3.0 DNA-binding response regulator compare
BWI76_RS09825 -1.5 -3.3 envelope biogenesis factor ElyC compare
BWI76_RS00345 -1.5 -3.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS24275 -1.5 -2.5 biopolymer transport protein ExbD compare
BWI76_RS21450 -1.4 -1.6 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS01080 -1.4 -6.2 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS11300 -1.4 -0.9 cupin compare
BWI76_RS01125 -1.4 -4.0 4-alpha-L-fucosyltransferase compare
BWI76_RS21260 -1.4 -5.2 two-component sensor histidine kinase compare
BWI76_RS25225 -1.4 -3.0 ABC transporter permease compare
BWI76_RS15635 -1.4 -5.5 hypothetical protein compare
BWI76_RS21780 -1.4 -3.5 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS09870 -1.4 -3.5 aromatic amino acid aminotransferase compare
BWI76_RS13445 -1.4 -1.7 alpha/beta hydrolase compare
BWI76_RS12195 -1.4 -5.1 hypothetical protein compare
BWI76_RS04245 -1.4 -7.5 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS15600 -1.4 -2.8 hypothetical protein compare
BWI76_RS25070 -1.4 -1.1 hypothetical protein compare
BWI76_RS02340 -1.4 -3.9 membrane protein FxsA compare
BWI76_RS27440 -1.4 -1.9 DNA helicase RecG compare
BWI76_RS01185 -1.4 -0.9 adenylate cyclase compare
BWI76_RS12335 -1.4 -4.6 hypothetical protein compare
BWI76_RS10930 -1.3 -4.6 glucan biosynthesis protein G compare
BWI76_RS00180 -1.3 -0.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS14320 -1.3 -1.7 hypothetical protein compare
BWI76_RS15115 -1.3 -2.2 MFS transporter compare
BWI76_RS21075 -1.3 -1.2 membrane protein compare
BWI76_RS25960 -1.3 -2.3 NUDIX hydrolase compare
BWI76_RS21475 -1.3 -2.5 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS00855 -1.3 -6.5 argininosuccinate lyase compare
BWI76_RS12200 -1.3 -1.7 hypothetical protein compare
BWI76_RS12220 -1.3 -6.6 hypothetical protein compare
BWI76_RS18955 -1.3 -3.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS12375 -1.3 -3.4 DNA-invertase hin compare
BWI76_RS22760 -1.3 -3.1 sulfite reductase subunit beta compare
BWI76_RS15560 -1.3 -6.1 hypothetical protein compare
BWI76_RS09655 -1.3 -3.9 leucine-responsive regulatory protein compare
BWI76_RS25645 -1.2 -5.5 shikimate dehydrogenase compare
BWI76_RS05570 -1.2 -1.0 hypothetical protein compare
BWI76_RS09615 -1.2 -2.1 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS15695 -1.2 -4.3 hypothetical protein compare
BWI76_RS02775 -1.2 -2.9 outer membrane protein assembly factor compare
BWI76_RS26620 -1.2 -0.6 Fe-S biogenesis protein NfuA compare
BWI76_RS18905 -1.2 -2.8 putrescine/spermidine ABC transporter compare
BWI76_RS20150 -1.2 -1.2 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS13785 -1.2 -1.7 ABC transporter permease compare
BWI76_RS15840 -1.2 -2.5 prophage protein compare
BWI76_RS25115 -1.2 -5.5 argininosuccinate synthase compare
BWI76_RS26075 -1.2 -1.2 DNA adenine methylase compare
BWI76_RS00095 -1.2 -1.2 DNA-binding transcriptional regulator compare
BWI76_RS14005 -1.2 -1.2 TetR family transcriptional regulator compare
BWI76_RS13920 -1.2 -4.6 magnesium-translocating P-type ATPase compare
BWI76_RS25280 -1.2 -1.0 RNase adaptor protein RapZ compare
BWI76_RS23365 -1.2 -3.0 LysR family transcriptional regulator compare
BWI76_RS01795 -1.2 -2.4 hypothetical protein compare
BWI76_RS16355 -1.2 -2.1 electron transport complex subunit A compare
BWI76_RS20155 -1.2 -1.2 NADH-quinone oxidoreductase subunit I compare
BWI76_RS12225 -1.2 -2.7 hypothetical protein compare
BWI76_RS21340 -1.2 -1.5 SoxR reducing system protein RseC compare
BWI76_RS21250 -1.2 -4.2 two-component system response regulator GlrR compare
BWI76_RS15680 -1.2 -4.1 hypothetical protein compare
BWI76_RS23495 -1.2 -4.7 hypothetical protein compare
BWI76_RS05835 -1.2 -1.2 gamma-glutamyl-phosphate reductase compare
BWI76_RS14570 -1.1 -1.6 hypothetical protein compare
BWI76_RS12260 -1.1 -2.9 hypothetical protein compare
BWI76_RS03225 -1.1 -4.2 transcriptional regulator compare
BWI76_RS00845 -1.1 -4.5 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS26410 -1.1 -1.3 membrane protein compare
BWI76_RS12040 -1.1 -1.3 hypothetical protein compare
BWI76_RS01135 -1.1 -2.3 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS15515 -1.1 -6.1 hypothetical protein compare
BWI76_RS08275 -1.1 -1.2 LexA regulated protein compare
BWI76_RS07115 -1.1 -3.2 hypothetical protein compare
BWI76_RS12250 -1.1 -6.1 terminase compare
BWI76_RS12305 -1.1 -4.1 hypothetical protein compare
BWI76_RS15740 -1.1 -3.4 HNH endonuclease compare
BWI76_RS24850 -1.1 -3.4 DeoR family transcriptional regulator compare
BWI76_RS01105 -1.1 -2.2 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS21795 -1.1 -2.7 EAL domain-containing protein compare
BWI76_RS22430 -1.1 -1.3 manganese/iron transporter ATP-binding protein compare
BWI76_RS04250 -1.1 -4.3 homoserine kinase compare
BWI76_RS15605 -1.1 -1.7 hypothetical protein compare
BWI76_RS15525 -1.1 -5.2 hypothetical protein compare
BWI76_RS12270 -1.1 -2.4 hypothetical protein compare
BWI76_RS09195 -1.1 -0.9 N-acetyltransferase compare
BWI76_RS17805 -1.1 -1.2 membrane protein compare
BWI76_RS06680 -1.1 -1.0 hypothetical protein compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella in Klebsiella michiganensis M5al

For mixed community Mixed culture; Methylobacterium sp. UNC378MF 3:1 starting OD to Klebsiella across organisms