Experiment set13IT039 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS26460 -5.1 -5.0 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS17975 -5.0 -5.9 tail-specific protease compare
BWI76_RS26455 -4.8 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS23265 -4.6 -2.0 hypothetical protein compare
BWI76_RS17980 -4.6 -6.6 RNA chaperone ProQ compare
BWI76_RS08520 -4.3 -2.2 colicin transporter TolQ compare
BWI76_RS08535 -4.0 -2.1 translocation protein TolB compare
BWI76_RS08525 -3.9 -2.9 colicin transporter compare
BWI76_RS09645 -3.8 -1.2 thioredoxin-disulfide reductase compare
BWI76_RS20355 -3.8 -4.1 colicin V production protein compare
BWI76_RS16965 -3.7 -3.1 murein lipoprotein compare
BWI76_RS22755 -3.5 -5.3 phosphoadenosine phosphosulfate reductase compare
BWI76_RS05015 -3.5 -2.9 transcriptional regulator compare
BWI76_RS00875 -3.4 -6.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS08385 -3.4 -4.1 citrate (Si)-synthase compare
BWI76_RS09755 -3.3 -3.2 phosphoserine transaminase compare
BWI76_RS21780 -3.1 -4.1 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS01610 -3.0 -9.7 phosphoribosylamine--glycine ligase compare
BWI76_RS18950 -3.0 -6.0 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS05840 -3.0 -3.9 glutamate 5-kinase compare
BWI76_RS02995 -3.0 -8.1 aspartate carbamoyltransferase compare
BWI76_RS01800 -3.0 -2.0 glucose-6-phosphate isomerase compare
BWI76_RS01350 -2.9 -0.9 NAD(P)H-flavin reductase compare
BWI76_RS21340 -2.9 -2.3 SoxR reducing system protein RseC compare
BWI76_RS04470 -2.9 -9.8 carbamoyl phosphate synthase large subunit compare
BWI76_RS00345 -2.9 -4.6 protein disulfide oxidoreductase DsbA compare
BWI76_RS06535 -2.8 -3.3 endopeptidase La compare
BWI76_RS07065 -2.8 -7.6 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS01095 -2.8 -2.8 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS09910 -2.8 -15.7 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS21475 -2.8 -4.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS23920 -2.7 -2.4 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS01615 -2.7 -9.4 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS21265 -2.7 -15.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS09625 -2.7 -1.4 hypothetical protein compare
BWI76_RS26395 -2.7 -8.3 cell division protein FtsE compare
BWI76_RS22690 -2.7 -1.7 adenylyl-sulfate kinase compare
BWI76_RS08210 -2.6 -1.1 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS01210 -2.6 -1.3 tyrosine recombinase XerC compare
BWI76_RS20350 -2.5 -9.1 amidophosphoribosyltransferase compare
BWI76_RS27390 -2.5 -5.9 ribonuclease PH compare
BWI76_RS22765 -2.5 -9.5 sulfite reductase subunit alpha compare
BWI76_RS26390 -2.5 -5.0 cell division protein FtsX compare
BWI76_RS00965 -2.5 -1.1 acetolactate synthase 2 small subunit compare
BWI76_RS20895 -2.5 -5.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS09760 -2.5 -3.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS00835 -2.5 -12.3 phosphoenolpyruvate carboxylase compare
BWI76_RS24900 -2.5 -1.5 DeoR family transcriptional regulator compare
BWI76_RS27385 -2.5 -6.8 orotate phosphoribosyltransferase compare
BWI76_RS04465 -2.4 -3.9 carbamoyl-phosphate synthase small subunit compare
BWI76_RS11845 -2.4 -3.6 tryptophan synthase subunit beta compare
BWI76_RS25645 -2.4 -6.1 shikimate dehydrogenase compare
BWI76_RS27440 -2.3 -1.6 DNA helicase RecG compare
BWI76_RS24580 -2.3 -4.9 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS00400 -2.3 -1.2 glutamine synthetase compare
BWI76_RS06680 -2.3 -1.5 hypothetical protein compare
BWI76_RS18920 -2.3 -3.8 ATP phosphoribosyltransferase compare
BWI76_RS05450 -2.3 -0.9 ribonuclease HI compare
BWI76_RS18935 -2.2 -10.7 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS23885 -2.2 -1.0 2-octaprenylphenol hydroxylase compare
BWI76_RS25960 -2.2 -3.8 NUDIX hydrolase compare
BWI76_RS20380 -2.2 -0.9 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS17720 -2.2 -0.6 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS07465 -2.2 -1.1 TetR family transcriptional regulator compare
BWI76_RS11965 -2.1 -5.4 orotidine-5'-phosphate decarboxylase compare
BWI76_RS09190 -2.1 -1.5 hypothetical protein compare
BWI76_RS21370 -2.1 -0.8 ATP-dependent RNA helicase SrmB compare
BWI76_RS00855 -2.1 -6.7 argininosuccinate lyase compare
BWI76_RS26570 -2.1 -2.0 anion permease compare
BWI76_RS15110 -2.1 -5.2 putative excinuclease ABC subunit A compare
BWI76_RS00355 -2.1 -2.1 DNA polymerase I compare
BWI76_RS18955 -2.1 -4.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS12265 -2.0 -5.5 hypothetical protein compare
BWI76_RS03010 -2.0 -8.4 ornithine carbamoyltransferase compare
BWI76_RS25115 -2.0 -6.9 argininosuccinate synthase compare
BWI76_RS18925 -2.0 -4.3 histidinol dehydrogenase compare
BWI76_RS24605 -2.0 -5.4 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS18940 -2.0 -6.7 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS06405 -2.0 -2.8 2-dehydropantoate 2-reductase compare
BWI76_RS05120 -2.0 -6.3 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS01115 -2.0 -2.0 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS21465 -2.0 -5.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS09825 -2.0 -3.9 envelope biogenesis factor ElyC compare
BWI76_RS23490 -1.9 -4.8 fimbrial protein compare
BWI76_RS14065 -1.9 -2.3 hypothetical protein compare
BWI76_RS04645 -1.9 -2.3 3-dehydroquinase compare
BWI76_RS15845 -1.9 -0.9 hypothetical protein compare
BWI76_RS24075 -1.9 -3.6 glutathione synthase compare
BWI76_RS10990 -1.8 -3.1 dihydroorotase compare
BWI76_RS25600 -1.8 -0.9 tRNA-Thr compare
BWI76_RS09970 -1.8 -1.4 porin OmpA compare
BWI76_RS20360 -1.8 -0.7 cell division protein DedD compare
BWI76_RS08530 -1.8 -1.3 protein TolA compare
BWI76_RS11255 -1.8 -2.2 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS00845 -1.8 -7.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS07070 -1.8 -3.9 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS22760 -1.8 -4.5 sulfite reductase subunit beta compare
BWI76_RS22805 -1.8 -8.3 GTP diphosphokinase compare
BWI76_RS04160 -1.8 -2.8 phosphoserine phosphatase compare
BWI76_RS24600 -1.7 -2.3 dihydroxyacetone kinase compare
BWI76_RS08395 -1.7 -1.7 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS26470 -1.7 -4.9 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS10935 -1.7 -3.7 glucan biosynthesis glucosyltransferase H compare
BWI76_RS21580 -1.7 -0.9 SsrA-binding protein compare
BWI76_RS02530 -1.7 -1.1 tRNA dimethylallyltransferase compare
BWI76_RS05570 -1.7 -1.2 hypothetical protein compare
BWI76_RS20965 -1.7 -4.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS11850 -1.7 -5.5 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS11860 -1.7 -5.7 anthranilate synthase component I compare
BWI76_RS19840 -1.6 -1.2 hypothetical protein compare
BWI76_RS09870 -1.6 -6.0 aromatic amino acid aminotransferase compare
BWI76_RS00715 -1.6 -1.1 two-component sensor histidine kinase compare
BWI76_RS01220 -1.6 -3.1 DNA-dependent helicase II compare
BWI76_RS16210 -1.6 -1.8 hypothetical protein compare
BWI76_RS12205 -1.6 -2.5 hypothetical protein compare
BWI76_RS01125 -1.6 -4.5 4-alpha-L-fucosyltransferase compare
BWI76_RS25920 -1.6 -1.2 peptidylprolyl isomerase compare
BWI76_RS23365 -1.6 -3.9 LysR family transcriptional regulator compare
BWI76_RS09655 -1.5 -4.0 leucine-responsive regulatory protein compare
BWI76_RS18930 -1.5 -4.6 histidinol-phosphate transaminase compare
BWI76_RS25065 -1.5 -2.9 polyribonucleotide nucleotidyltransferase compare
BWI76_RS15115 -1.5 -1.7 MFS transporter compare
BWI76_RS21070 -1.5 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS14390 -1.5 -1.1 hypothetical protein compare
BWI76_RS05835 -1.5 -1.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS00850 -1.5 -5.9 acetylglutamate kinase compare
BWI76_RS03660 -1.5 -2.8 hypothetical protein compare
BWI76_RS24740 -1.5 -2.2 GntR family transcriptional regulator compare
BWI76_RS04240 -1.4 -2.5 thr operon leader peptide compare
BWI76_RS26075 -1.4 -1.4 DNA adenine methylase compare
BWI76_RS19770 -1.4 -0.9 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS12125 -1.4 -3.0 hypothetical protein compare
BWI76_RS04305 -1.4 -1.1 molecular chaperone DnaJ compare
BWI76_RS12090 -1.4 -1.4 HNH endonuclease compare
BWI76_RS15635 -1.4 -3.5 hypothetical protein compare
BWI76_RS14005 -1.4 -1.3 TetR family transcriptional regulator compare
BWI76_RS01080 -1.4 -6.0 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS12195 -1.4 -2.5 hypothetical protein compare
BWI76_RS04255 -1.4 -6.6 threonine synthase compare
BWI76_RS12400 -1.3 -4.0 TetR family transcriptional regulator compare
BWI76_RS05260 -1.3 -0.9 chaperone compare
BWI76_RS21250 -1.3 -3.4 two-component system response regulator GlrR compare
BWI76_RS15215 -1.3 -1.0 N-acetyltransferase compare
BWI76_RS25700 -1.3 -5.4 heavy metal-responsive transcriptional regulator compare
BWI76_RS16425 -1.3 -1.3 hypothetical protein compare
BWI76_RS08020 -1.3 -4.3 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS01385 -1.3 -1.2 potassium transporter compare
BWI76_RS25335 -1.3 -0.9 stringent starvation protein A compare
BWI76_RS05235 -1.3 -1.1 hypothetical protein compare
BWI76_RS01185 -1.3 -0.9 adenylate cyclase compare
BWI76_RS12750 -1.3 -3.0 hypothetical protein compare
BWI76_RS00180 -1.3 -0.5 F0F1 ATP synthase subunit epsilon compare
BWI76_RS15565 -1.3 -4.1 hypothetical protein compare
BWI76_RS21660 -1.3 -1.4 antirestriction protein compare
BWI76_RS12190 -1.3 -4.8 glycoside hydrolase family protein compare
BWI76_RS05915 -1.3 -2.6 helix-turn-helix transcriptional regulator compare
BWI76_RS01870 -1.3 -2.8 diacylglycerol kinase compare
BWI76_RS26670 -1.3 -5.9 two-component sensor histidine kinase compare
BWI76_RS11840 -1.3 -3.3 tryptophan synthase subunit alpha compare
BWI76_RS00990 -1.2 -7.0 ketol-acid reductoisomerase compare
BWI76_RS01200 -1.2 -0.8 diaminopimelate epimerase compare
BWI76_RS17190 -1.2 -1.7 TonB system transport protein TonB compare
BWI76_RS01110 -1.2 -2.2 TDP-fucosamine acetyltransferase compare
BWI76_RS01135 -1.2 -3.0 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS23480 -1.2 -9.1 EAL domain-containing protein compare
BWI76_RS12320 -1.2 -4.3 hypothetical protein compare
BWI76_RS00600 -1.2 -3.8 LacI family transcriptional regulator compare
BWI76_RS01105 -1.2 -3.6 glucose-1-phosphate thymidylyltransferase compare
BWI76_RS20475 -1.2 -4.5 phospholipid-binding lipoprotein MlaA compare
BWI76_RS22430 -1.2 -3.4 manganese/iron transporter ATP-binding protein compare
BWI76_RS21075 -1.2 -1.1 membrane protein compare
BWI76_RS02340 -1.2 -2.9 membrane protein FxsA compare
BWI76_RS13920 -1.2 -5.3 magnesium-translocating P-type ATPase compare
BWI76_RS25060 -1.2 -3.5 lipoprotein NlpI compare
BWI76_RS09335 -1.2 -0.8 baseplate assembly protein W compare
BWI76_RS04245 -1.2 -7.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS20280 -1.2 -2.3 phosphodiesterase compare
BWI76_RS12225 -1.2 -1.2 hypothetical protein compare
BWI76_RS15660 -1.1 -1.5 hypothetical protein compare
BWI76_RS13595 -1.1 -3.2 transcriptional regulator compare
BWI76_RS15680 -1.1 -3.0 hypothetical protein compare
BWI76_RS00140 -1.1 -1.2 phosphate transport system regulator PhoU compare
BWI76_RS12230 -1.1 -4.5 hypothetical protein compare
BWI76_RS12325 -1.1 -7.4 hypothetical protein compare
BWI76_RS10575 -1.1 -1.0 polar amino acid ABC transporter permease compare
BWI76_RS02815 -1.1 -1.1 fructose-bisphosphatase class I compare
BWI76_RS04525 -1.1 -0.9 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS13915 -1.1 -5.5 magnesium transport protein MgtC compare
BWI76_RS03225 -1.1 -4.2 transcriptional regulator compare
BWI76_RS22950 -1.1 -1.9 membrane protein compare
BWI76_RS14320 -1.1 -1.3 hypothetical protein compare
BWI76_RS12255 -1.1 -5.9 hypothetical protein compare
BWI76_RS10930 -1.1 -3.6 glucan biosynthesis protein G compare
BWI76_RS12070 -1.1 -1.0 hypothetical protein compare
BWI76_RS24400 -1.1 -2.9 outer membrane channel protein TolC compare
BWI76_RS12250 -1.1 -6.8 terminase compare
BWI76_RS12335 -1.1 -4.0 hypothetical protein compare
BWI76_RS19035 -1.1 -5.5 dTDP-rhamnosyl transferase compare
BWI76_RS21565 -1.1 -0.7 outer membrane protein assembly factor BamE compare
BWI76_RS26620 -1.1 -0.5 Fe-S biogenesis protein NfuA compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Burkholderia bryophila 376MFSha3.1 3:1 starting OD to Klebsiella across organisms