Experiment set13IT037 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 0.1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS01115 -6.2 -2.5 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS27915 -4.9 -2.0 YceK/YidQ family lipoprotein compare
BWI76_RS26455 -4.8 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS23265 -4.6 -1.5 hypothetical protein compare
BWI76_RS19840 -4.5 -1.1 hypothetical protein compare
BWI76_RS08525 -4.5 -1.8 colicin transporter compare
BWI76_RS05015 -4.2 -1.9 transcriptional regulator compare
BWI76_RS08520 -4.2 -1.7 colicin transporter TolQ compare
BWI76_RS02725 -4.2 -1.0 HxlR family transcriptional regulator compare
BWI76_RS16965 -4.0 -2.2 murein lipoprotein compare
BWI76_RS07820 -3.9 -1.3 S-methyl-5-thioribose kinase compare
BWI76_RS08535 -3.9 -1.6 translocation protein TolB compare
BWI76_RS09645 -3.8 -0.9 thioredoxin-disulfide reductase compare
BWI76_RS01095 -3.7 -2.4 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS00965 -3.7 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS20750 -3.7 -0.8 carboxysome structural protein EutK compare
BWI76_RS04515 -3.7 -1.2 Co2+/Mg2+ efflux protein ApaG compare
BWI76_RS25600 -3.6 -0.8 tRNA-Thr compare
BWI76_RS26395 -3.5 -6.2 cell division protein FtsE compare
BWI76_RS25920 -3.4 -1.4 peptidylprolyl isomerase compare
BWI76_RS08530 -3.4 -1.1 protein TolA compare
BWI76_RS09760 -3.4 -3.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS08385 -3.4 -3.3 citrate (Si)-synthase compare
BWI76_RS04240 -3.4 -2.4 thr operon leader peptide compare
BWI76_RS09195 -3.3 -1.1 N-acetyltransferase compare
BWI76_RS05835 -3.3 -1.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS06015 -3.2 -1.4 hypothetical protein compare
BWI76_RS00355 -3.2 -1.2 DNA polymerase I compare
BWI76_RS26390 -3.2 -7.9 cell division protein FtsX compare
BWI76_RS23920 -3.2 -1.6 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS22755 -3.2 -3.8 phosphoadenosine phosphosulfate reductase compare
BWI76_RS05840 -3.1 -3.2 glutamate 5-kinase compare
BWI76_RS21075 -3.1 -1.2 membrane protein compare
BWI76_RS26570 -3.1 -1.9 anion permease compare
BWI76_RS20565 -3.0 -1.4 hypothetical protein compare
BWI76_RS20360 -3.0 -0.7 cell division protein DedD compare
BWI76_RS17980 -2.9 -2.7 RNA chaperone ProQ compare
BWI76_RS24605 -2.9 -5.5 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS25070 -2.9 -1.1 hypothetical protein compare
BWI76_RS26620 -2.9 -0.7 Fe-S biogenesis protein NfuA compare
BWI76_RS15825 -2.9 -0.9 hypothetical protein compare
BWI76_RS26460 -2.8 -2.6 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS11300 -2.8 -0.9 cupin compare
BWI76_RS16335 -2.8 -1.9 division septum protein Blr compare
BWI76_RS21260 -2.7 -4.5 two-component sensor histidine kinase compare
BWI76_RS00755 -2.7 -2.4 ATP-dependent protease subunit HslV compare
BWI76_RS24580 -2.7 -5.0 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS01385 -2.6 -1.4 potassium transporter compare
BWI76_RS20895 -2.6 -4.2 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS08210 -2.6 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS16230 -2.5 -1.7 dihydromonapterin reductase compare
BWI76_RS07465 -2.5 -0.8 TetR family transcriptional regulator compare
BWI76_RS12855 -2.5 -2.1 enamine deaminase RidA compare
BWI76_RS18935 -2.5 -8.6 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS01210 -2.5 -1.0 tyrosine recombinase XerC compare
BWI76_RS07070 -2.5 -4.7 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS15215 -2.4 -1.1 N-acetyltransferase compare
BWI76_RS25115 -2.4 -4.4 argininosuccinate synthase compare
BWI76_RS09670 -2.4 -1.8 recombination factor protein RarA compare
BWI76_RS23690 -2.3 -1.6 putative glyoxalase/bleomycin resistance protein/dioxygenase compare
BWI76_RS21070 -2.3 -1.2 outer membrane protein assembly factor BamB compare
BWI76_RS05450 -2.2 -0.7 ribonuclease HI compare
BWI76_RS05810 -2.2 -1.1 hypothetical protein compare
BWI76_RS27440 -2.2 -1.5 DNA helicase RecG compare
BWI76_RS20380 -2.2 -0.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS04160 -2.2 -2.7 phosphoserine phosphatase compare
BWI76_RS16260 -2.2 -1.6 two-component sensor histidine kinase compare
BWI76_RS03660 -2.2 -2.5 hypothetical protein compare
BWI76_RS00875 -2.2 -3.3 DNA-binding transcriptional regulator FabR compare
BWI76_RS09730 -2.2 -0.7 pyruvate formate lyase 1-activating protein compare
BWI76_RS18950 -2.2 -3.1 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS17720 -2.2 -0.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS00835 -2.2 -7.5 phosphoenolpyruvate carboxylase compare
BWI76_RS11520 -2.2 -1.2 hypothetical protein compare
BWI76_RS00400 -2.2 -0.8 glutamine synthetase compare
BWI76_RS07065 -2.1 -6.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS12750 -2.1 -2.9 hypothetical protein compare
BWI76_RS01220 -2.1 -4.0 DNA-dependent helicase II compare
BWI76_RS20490 -2.1 -2.2 hypothetical protein compare
BWI76_RS21370 -2.1 -0.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS06635 -2.1 -2.2 methylated-DNA--protein-cysteine methyltransferase compare
BWI76_RS15110 -2.1 -5.4 putative excinuclease ABC subunit A compare
BWI76_RS25335 -2.1 -1.5 stringent starvation protein A compare
BWI76_RS26665 -2.0 -2.7 DNA-binding response regulator compare
BWI76_RS09190 -2.0 -1.4 hypothetical protein compare
BWI76_RS20350 -2.0 -4.6 amidophosphoribosyltransferase compare
BWI76_RS06535 -2.0 -2.7 endopeptidase La compare
BWI76_RS10990 -2.0 -2.6 dihydroorotase compare
BWI76_RS16555 -2.0 -3.3 hypothetical protein compare
BWI76_RS20355 -2.0 -3.3 colicin V production protein compare
BWI76_RS18770 -2.0 -1.0 DNA gyrase inhibitor compare
BWI76_RS21475 -2.0 -2.9 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS21780 -2.0 -3.9 S-(hydroxymethyl)glutathione synthase compare
BWI76_RS00240 -2.0 -0.9 FMN-binding protein MioC compare
BWI76_RS09755 -1.9 -3.0 phosphoserine transaminase compare
BWI76_RS16425 -1.9 -2.2 hypothetical protein compare
BWI76_RS01615 -1.9 -6.1 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS21375 -1.9 -0.6 autonomous glycyl radical cofactor GrcA compare
BWI76_RS00845 -1.9 -5.1 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00345 -1.9 -2.4 protein disulfide oxidoreductase DsbA compare
BWI76_RS05120 -1.9 -4.3 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS01110 -1.9 -3.4 TDP-fucosamine acetyltransferase compare
BWI76_RS18930 -1.9 -2.6 histidinol-phosphate transaminase compare
BWI76_RS05915 -1.9 -2.8 helix-turn-helix transcriptional regulator compare
BWI76_RS27385 -1.9 -5.3 orotate phosphoribosyltransferase compare
BWI76_RS17975 -1.8 -2.9 tail-specific protease compare
BWI76_RS19460 -1.8 -1.9 lipoprotein compare
BWI76_RS00855 -1.8 -4.1 argininosuccinate lyase compare
BWI76_RS22765 -1.8 -5.0 sulfite reductase subunit alpha compare
BWI76_RS08380 -1.8 -1.2 endonuclease VIII compare
BWI76_RS04470 -1.8 -5.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS07785 -1.8 -1.3 transcriptional regulator compare
BWI76_RS09825 -1.8 -3.0 envelope biogenesis factor ElyC compare
BWI76_RS18940 -1.7 -2.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS13755 -1.7 -1.0 hypothetical protein compare
BWI76_RS01350 -1.7 -0.5 NAD(P)H-flavin reductase compare
BWI76_RS16735 -1.7 -2.1 cold-shock protein compare
BWI76_RS15565 -1.7 -2.4 hypothetical protein compare
BWI76_RS04705 -1.7 -2.4 DNA-binding transcriptional regulator FruR compare
BWI76_RS09555 -1.7 -2.7 pyruvate oxidase compare
BWI76_RS04250 -1.7 -3.6 homoserine kinase compare
BWI76_RS19035 -1.7 -6.2 dTDP-rhamnosyl transferase compare
BWI76_RS23490 -1.7 -3.8 fimbrial protein compare
BWI76_RS14320 -1.7 -1.6 hypothetical protein compare
BWI76_RS25645 -1.6 -3.5 shikimate dehydrogenase compare
BWI76_RS08205 -1.6 -2.9 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS03010 -1.6 -5.3 ornithine carbamoyltransferase compare
BWI76_RS21450 -1.6 -0.9 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS02530 -1.6 -0.8 tRNA dimethylallyltransferase compare
BWI76_RS06680 -1.6 -1.0 hypothetical protein compare
BWI76_RS16220 -1.6 -1.5 hypothetical protein compare
BWI76_RS21265 -1.6 -8.2 phosphoribosylformylglycinamidine synthase compare
BWI76_RS15115 -1.6 -1.1 MFS transporter compare
BWI76_RS26095 -1.6 -0.5 shikimate kinase compare
BWI76_RS11610 -1.5 -1.4 glutamate dehydrogenase compare
BWI76_RS15535 -1.5 -1.9 hypothetical protein compare
BWI76_RS25065 -1.5 -1.7 polyribonucleotide nucleotidyltransferase compare
BWI76_RS12405 -1.5 -4.2 diguanylate phosphodiesterase compare
BWI76_RS01795 -1.5 -1.5 hypothetical protein compare
BWI76_RS12215 -1.5 -3.3 HNH endonuclease compare
BWI76_RS15680 -1.5 -4.1 hypothetical protein compare
BWI76_RS21350 -1.5 -0.9 anti-RNA polymerase sigma factor SigE compare
BWI76_RS19685 -1.5 -3.4 lysine transporter compare
BWI76_RS21810 -1.5 -1.1 universal stress protein compare
BWI76_RS11440 -1.5 -0.9 hypothetical protein compare
BWI76_RS26245 -1.5 -3.2 transcriptional regulator compare
BWI76_RS00715 -1.5 -1.0 two-component sensor histidine kinase compare
BWI76_RS00850 -1.5 -2.8 acetylglutamate kinase compare
BWI76_RS09910 -1.5 -7.3 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04255 -1.5 -4.8 threonine synthase compare
BWI76_RS21690 -1.5 -1.6 hypothetical protein compare
BWI76_RS01065 -1.5 -2.0 ATP-dependent RNA helicase RhlB compare
BWI76_RS12170 -1.5 -2.4 hypothetical protein compare
BWI76_RS27820 -1.5 -0.4 ilvB operon leader peptide IvbL compare
BWI76_RS12235 -1.5 -2.3 hypothetical protein compare
BWI76_RS20720 -1.4 -0.6 hypothetical protein compare
BWI76_RS21215 -1.4 -3.1 NAGC-like transcriptional regulator compare
BWI76_RS15760 -1.4 -1.3 hypothetical protein compare
BWI76_RS16210 -1.4 -1.1 hypothetical protein compare
BWI76_RS01610 -1.4 -4.9 phosphoribosylamine--glycine ligase compare
BWI76_RS09870 -1.4 -2.0 aromatic amino acid aminotransferase compare
BWI76_RS14375 -1.4 -2.1 hypothetical protein compare
BWI76_RS09625 -1.4 -0.8 hypothetical protein compare
BWI76_RS24595 -1.4 -1.3 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS20145 -1.4 -0.9 NADH-quinone oxidoreductase subunit K compare
BWI76_RS08110 -1.4 -2.4 glutamate/aspartate ABC transporter substrate-binding protein compare
BWI76_RS02995 -1.4 -2.6 aspartate carbamoyltransferase compare
BWI76_RS08330 -1.4 -1.2 hypothetical protein compare
BWI76_RS02775 -1.4 -2.3 outer membrane protein assembly factor compare
BWI76_RS11190 -1.4 -1.3 putative TetR/AcrR family transcriptional regulatory protein compare
BWI76_RS24600 -1.4 -1.5 dihydroxyacetone kinase compare
BWI76_RS12260 -1.4 -2.5 hypothetical protein compare
BWI76_RS26075 -1.4 -0.8 DNA adenine methylase compare
BWI76_RS04715 -1.4 -1.6 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS21465 -1.4 -2.4 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS10575 -1.3 -0.9 polar amino acid ABC transporter permease compare
BWI76_RS23365 -1.3 -2.4 LysR family transcriptional regulator compare
BWI76_RS23480 -1.3 -8.6 EAL domain-containing protein compare
BWI76_RS12290 -1.3 -3.0 hypothetical protein compare
BWI76_RS23915 -1.3 -1.3 5-formyltetrahydrofolate cyclo-ligase compare
BWI76_RS27780 -1.3 -1.5 hypothetical protein compare
BWI76_RS21140 -1.3 -0.6 molecular chaperone HscA compare
BWI76_RS20155 -1.3 -0.9 NADH-quinone oxidoreductase subunit I compare
BWI76_RS20965 -1.3 -1.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS04245 -1.3 -6.8 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS13915 -1.3 -3.8 magnesium transport protein MgtC compare
BWI76_RS15600 -1.3 -2.1 hypothetical protein compare
BWI76_RS04465 -1.3 -1.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS27305 -1.3 -4.4 glycosyl transferase compare
BWI76_RS22485 -1.3 -3.1 hypothetical protein compare
BWI76_RS14240 -1.3 -2.0 thiol reductase thioredoxin compare
BWI76_RS21560 -1.3 -2.4 DNA repair protein RecN compare
BWI76_RS14075 -1.3 -1.3 TetR family transcriptional regulator compare
BWI76_RS21535 -1.3 -3.5 inner membrane protein YpjD compare
BWI76_RS18775 -1.3 -2.6 hypothetical protein compare
BWI76_RS02340 -1.3 -2.9 membrane protein FxsA compare
BWI76_RS12185 -1.3 -2.5 hypothetical protein compare
BWI76_RS14755 -1.3 -1.6 SIS domain-containing protein compare
BWI76_RS12340 -1.3 -2.6 molecular chaperone Tir compare
BWI76_RS01080 -1.3 -3.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare


Specific Phenotypes

None in this experiment

For Klebsiella michiganensis M5al in mixed community experiments

For mixed community Mixed culture; Ralstonia sp. UNC404CL21Col 3:1 starting OD to Klebsiella across organisms