Experiment set13IT033 for Pseudomonas fluorescens SBW25-INTG

Compare to:

L-Glutamine (C)(N); with MOPS; with Sodium chloride

200 most detrimental genes:

  gene name fitness t score description  
PFLU_RS08650 +1.5 2.4 heme exporter protein CcmB compare
PFLU_RS08735 +1.5 3.0 histidine phosphatase family protein compare
PFLU_RS01875 +1.5 2.5 16S rRNA (uracil(1498)-N(3))-methyltransferase compare
PFLU_RS18055 +1.4 2.6 hydrolase compare
PFLU_RS00870 +1.3 2.1 hypothetical protein compare
PFLU_RS22190 +1.2 1.8 hypothetical protein compare
PFLU_RS07525 +1.2 2.7 cyclic nucleotide-binding domain-containing protein compare
PFLU_RS04565 +1.2 1.2 TMEM165/GDT1 family protein compare
PFLU_RS18885 +1.1 2.3 peptidyl-prolyl cis-trans isomerase compare
PFLU_RS14715 +1.1 7.0 protein-glutamate O-methyltransferase CheR compare
PFLU_RS00850 +1.0 2.2 hypothetical protein compare
PFLU_RS03555 +1.0 1.2 EscS/YscS/HrcS family type III secretion system export apparatus protein compare
PFLU_RS19730 +1.0 2.6 glyoxylate/hydroxypyruvate reductase A compare
PFLU_RS31530 +1.0 1.2 transposase compare
PFLU_RS18725 +1.0 1.2 alpha/beta hydrolase compare
PFLU_RS07695 +0.9 2.5 beta-N-acetylhexosaminidase compare
PFLU_RS13715 +0.9 1.1 MmcQ/YjbR family DNA-binding protein compare
PFLU_RS16565 +0.9 3.0 hypothetical protein compare
PFLU_RS24305 +0.9 2.7 antibiotic biosynthesis monooxygenase compare
PFLU_RS21050 +0.9 3.4 hypothetical protein compare
PFLU_RS15910 +0.9 2.0 homoprotocatechuate degradation operon regulator HpaR compare
PFLU_RS31275 +0.9 1.5 hypothetical protein compare
PFLU_RS15310 +0.9 1.9 YgdI/YgdR family lipoprotein compare
PFLU_RS30730 +0.8 1.7 helix-turn-helix domain-containing protein compare
PFLU_RS31645 +0.8 1.9 hypothetical protein compare
PFLU_RS00520 +0.8 2.9 DUF2388 domain-containing protein compare
PFLU_RS31830 +0.8 1.0 hypothetical protein compare
PFLU_RS29780 +0.8 4.3 acyl-CoA thioesterase compare
PFLU_RS18735 +0.8 1.4 hypothetical protein compare
PFLU_RS17855 +0.8 2.2 YjbF family lipoprotein compare
PFLU_RS08875 +0.8 2.7 heme-binding protein compare
PFLU_RS16250 +0.8 2.4 hypothetical protein compare
PFLU_RS31805 +0.8 2.1 hypothetical protein compare
PFLU_RS03585 +0.7 2.0 hypothetical protein compare
PFLU_RS19805 +0.7 2.9 LysR family transcriptional regulator compare
PFLU_RS28315 +0.7 0.7 response regulator compare
PFLU_RS12800 +0.7 1.7 amino acid ABC transporter ATP-binding protein compare
PFLU_RS01910 +0.7 0.9 sterol-binding protein compare
PFLU_RS13220 +0.7 3.4 carbon-nitrogen hydrolase family protein compare
PFLU_RS15990 +0.7 1.4 SDR family oxidoreductase compare
PFLU_RS01685 +0.7 2.4 nitrogen regulation protein NR(I) compare
PFLU_RS19955 +0.7 2.8 TetR/AcrR family transcriptional regulator compare
PFLU_RS16935 +0.7 1.5 CoA ester lyase compare
PFLU_RS00435 +0.7 5.7 PAS domain-containing protein compare
PFLU_RS13090 +0.7 2.3 DUF2797 domain-containing protein compare
PFLU_RS08065 +0.7 4.0 N-acetylmuramic acid 6-phosphate phosphatase MupP compare
PFLU_RS21910 +0.7 5.6 BamA/TamA family outer membrane protein compare
PFLU_RS31215 +0.7 1.4 hypothetical protein compare
PFLU_RS02875 +0.6 2.2 urease subunit gamma compare
PFLU_RS17750 +0.6 1.7 pirin family protein compare
PFLU_RS22875 +0.6 2.6 hypothetical protein compare
PFLU_RS30825 +0.6 2.1 hypothetical protein compare
PFLU_RS13315 +0.6 1.6 class I SAM-dependent methyltransferase compare
PFLU_RS16005 +0.6 2.1 DUF3156 family protein compare
PFLU_RS23235 +0.6 1.7 Arc family DNA-binding protein compare
PFLU_RS11930 +0.6 1.1 biopolymer transporter ExbD compare
PFLU_RS22395 +0.6 2.9 fumarate/nitrate reduction transcriptional regulator Fnr compare
PFLU_RS18605 +0.6 3.2 secretin compare
PFLU_RS31755 +0.6 0.9 hypothetical protein compare
PFLU_RS21600 +0.6 2.0 response regulator transcription factor compare
PFLU_RS16510 +0.6 2.1 thiol-disulfide oxidoreductase DCC family protein compare
PFLU_RS15270 +0.6 3.8 sodium:proton antiporter compare
PFLU_RS14335 +0.6 1.3 ABC transporter permease compare
PFLU_RS13640 +0.6 1.3 isochorismatase family protein compare
PFLU_RS23940 +0.6 2.1 hypothetical protein compare
PFLU_RS27440 +0.6 3.3 nucleotidyltransferase family protein compare
PFLU_RS08695 +0.6 2.4 DUF3077 domain-containing protein compare
PFLU_RS27445 +0.6 5.0 phosphotransferase compare
PFLU_RS12145 +0.6 1.5 nuclear transport factor 2 family protein compare
PFLU_RS23325 +0.6 3.8 GlxA family transcriptional regulator compare
PFLU_RS21695 +0.6 3.9 flagellar biosynthesis protein FlhB compare
PFLU_RS28250 +0.6 1.4 malonate decarboxylase holo-ACP synthase compare
PFLU_RS25190 +0.6 0.8 hypothetical protein compare
PFLU_RS15565 +0.6 2.0 SDR family oxidoreductase compare
PFLU_RS31780 +0.6 1.4 hypothetical protein compare
PFLU_RS13025 +0.6 2.8 CbtA family protein compare
PFLU_RS21240 +0.6 1.1 hypothetical protein compare
PFLU_RS21710 +0.6 3.5 flagellar type III secretion system pore protein FliP compare
PFLU_RS11555 +0.6 2.0 four-carbon acid sugar kinase family protein compare
PFLU_RS07380 +0.6 2.3 LysR family transcriptional regulator compare
PFLU_RS00190 +0.6 0.9 DUF883 domain-containing protein compare
PFLU_RS23170 +0.6 3.3 flagellar hook assembly protein FlgD compare
PFLU_RS29315 +0.6 1.8 hypothetical protein compare
PFLU_RS14430 +0.6 1.0 arsenate reductase ArsC compare
PFLU_RS14475 +0.6 2.1 molybdenum ABC transporter ATP-binding protein compare
PFLU_RS20790 +0.6 1.6 heme-binding protein compare
PFLU_RS20870 +0.6 1.3 hypothetical protein compare
PFLU_RS24935 +0.6 3.0 two pore domain potassium channel family protein compare
PFLU_RS06630 +0.5 1.7 ABC transporter ATP-binding protein compare
PFLU_RS19550 +0.5 0.7 ABC transporter ATP-binding protein compare
PFLU_RS07495 +0.5 1.0 DUF2892 domain-containing protein compare
PFLU_RS24020 +0.5 2.9 RDD family protein compare
PFLU_RS22365 +0.5 2.7 membrane protein compare
PFLU_RS24475 +0.5 4.9 AmpG family muropeptide MFS transporter compare
PFLU_RS11175 +0.5 2.2 NAD(P)-dependent oxidoreductase compare
PFLU_RS03305 +0.5 2.4 YigZ family protein compare
PFLU_RS18005 +0.5 1.4 acyl-CoA/acyl-ACP dehydrogenase compare
PFLU_RS08625 +0.5 2.2 molybdenum cofactor biosynthesis protein B compare
PFLU_RS31630 +0.5 1.5 hypothetical protein compare
PFLU_RS18700 +0.5 0.6 hypothetical protein compare
PFLU_RS21780 +0.5 2.5 flagellar hook-basal body complex protein FliE compare
PFLU_RS11770 +0.5 1.5 type 1 glutamine amidotransferase domain-containing protein compare
PFLU_RS08120 +0.5 1.8 hypothetical protein compare
PFLU_RS12810 +0.5 2.3 IclR family transcriptional regulator compare
PFLU_RS17340 +0.5 1.7 AAA family ATPase compare
PFLU_RS30950 +0.5 2.4 cytochrome c compare
PFLU_RS31835 +0.5 1.1 hypothetical protein compare
PFLU_RS14450 +0.5 1.1 AzlD domain-containing protein compare
PFLU_RS09480 +0.5 1.3 hypothetical protein compare
PFLU_RS19520 +0.5 1.4 substrate-binding domain-containing protein compare
PFLU_RS17615 +0.5 0.9 DeoR/GlpR transcriptional regulator compare
PFLU_RS17975 +0.5 2.5 cysteine dioxygenase compare
PFLU_RS19830 +0.5 1.2 type VI secretion system tube protein Hcp compare
PFLU_RS13665 +0.5 0.8 MarR family transcriptional regulator compare
PFLU_RS08350 +0.5 0.8 ABC transporter ATP-binding protein compare
PFLU_RS12520 +0.5 2.4 carboxymuconolactone decarboxylase family protein compare
PFLU_RS00335 +0.5 2.6 SCO family protein compare
PFLU_RS29290 +0.5 1.8 hypothetical protein compare
PFLU_RS23780 +0.5 1.9 ATPase compare
PFLU_RS30595 +0.5 2.4 group II intron reverse transcriptase/maturase compare
PFLU_RS09880 +0.5 2.4 short-chain fatty acid transporter compare
PFLU_RS13255 +0.5 2.3 TIM barrel protein compare
PFLU_RS16960 +0.5 1.2 LysR family transcriptional regulator compare
PFLU_RS14210 +0.5 1.1 TetR/AcrR family transcriptional regulator compare
PFLU_RS15785 +0.5 1.2 type II secretion system protein GspH compare
PFLU_RS17160 +0.5 1.7 hypothetical protein compare
PFLU_RS25570 +0.5 1.4 OmpA family protein compare
PFLU_RS04490 +0.5 1.7 hypoxanthine-guanine phosphoribosyltransferase compare
PFLU_RS23135 +0.5 1.7 hypothetical protein compare
PFLU_RS04740 +0.5 1.5 hypothetical protein compare
PFLU_RS30645 +0.5 1.1 type II toxin-antitoxin system HicA family toxin compare
PFLU_RS08285 +0.5 1.7 hypothetical protein compare
PFLU_RS16530 +0.5 1.7 hypothetical protein compare
PFLU_RS01850 +0.5 3.0 transporter substrate-binding domain-containing protein compare
PFLU_RS18120 +0.5 1.6 DeoR family transcriptional regulator compare
PFLU_RS07090 +0.5 1.7 cysteine-rich CWC family protein compare
PFLU_RS04505 +0.5 1.8 hypothetical protein compare
PFLU_RS23180 +0.5 2.8 flagellar basal body rod protein FlgB compare
PFLU_RS14205 +0.5 2.0 nuclear transport factor 2 family protein compare
PFLU_RS23350 +0.5 3.1 ABC transporter substrate-binding protein compare
PFLU_RS31670 +0.5 2.1 hypothetical protein compare
PFLU_RS14120 +0.5 2.1 cell wall hydrolase compare
PFLU_RS11745 +0.5 2.6 xylose isomerase compare
PFLU_RS13370 +0.5 0.5 DUF2790 domain-containing protein compare
PFLU_RS00535 +0.5 0.7 DUF1127 domain-containing protein compare
PFLU_RS09685 +0.5 2.0 hypothetical protein compare
PFLU_RS10955 +0.5 1.5 peptide-methionine (S)-S-oxide reductase MsrA compare
PFLU_RS14995 +0.5 1.2 response regulator transcription factor compare
PFLU_RS18420 +0.4 0.6 hypothetical protein compare
PFLU_RS21895 +0.4 1.8 DMT family transporter compare
PFLU_RS19995 +0.4 1.5 Fe(3+)-dicitrate ABC transporter substrate-binding protein FecB compare
PFLU_RS18555 +0.4 2.8 ATP-dependent Clp protease adapter ClpS compare
PFLU_RS00770 +0.4 1.9 hypothetical protein compare
PFLU_RS15245 +0.4 2.0 response regulator compare
PFLU_RS17265 +0.4 0.9 hypothetical protein compare
PFLU_RS12850 +0.4 1.7 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS05350 +0.4 2.8 GTP-binding protein compare
PFLU_RS18030 +0.4 2.4 phytase compare
PFLU_RS01110 +0.4 2.0 AAA family ATPase compare
PFLU_RS20720 +0.4 1.0 ABC transporter ATP-binding protein compare
PFLU_RS13945 +0.4 0.9 hypothetical protein compare
PFLU_RS21755 +0.4 2.5 flagella biosynthesis chaperone FliJ compare
PFLU_RS12375 +0.4 1.3 hypothetical protein compare
PFLU_RS14575 +0.4 2.7 alkyl hydroperoxide reductase subunit F compare
PFLU_RS15000 +0.4 1.3 HAMP domain-containing histidine kinase compare
PFLU_RS21635 +0.4 2.0 flagellar motor protein compare
PFLU_RS16030 +0.4 2.0 aldehyde dehydrogenase family protein compare
PFLU_RS11525 +0.4 1.3 GntR family transcriptional regulator compare
PFLU_RS12220 +0.4 1.3 AraC family transcriptional regulator compare
PFLU_RS00410 +0.4 2.8 cytochrome c4 compare
PFLU_RS00800 +0.4 2.7 RDD family protein compare
PFLU_RS30340 +0.4 1.0 hypothetical protein compare
PFLU_RS13165 +0.4 2.4 hypothetical protein compare
PFLU_RS22530 +0.4 1.5 DUF469 domain-containing protein compare
PFLU_RS29485 +0.4 1.4 DUF4870 domain-containing protein compare
PFLU_RS15265 +0.4 1.5 EAL domain-containing response regulator compare
PFLU_RS07520 +0.4 0.6 hypothetical protein compare
PFLU_RS10560 +0.4 1.8 porphobilinogen synthase compare
PFLU_RS12650 +0.4 0.9 hypothetical protein compare
PFLU_RS21700 +0.4 2.4 flagellar type III secretion system protein FliR compare
PFLU_RS13695 +0.4 1.7 nicotinamide mononucleotide transporter compare
PFLU_RS08360 +0.4 1.7 hypothetical protein compare
PFLU_RS20475 +0.4 2.1 hypothetical protein compare
PFLU_RS03075 +0.4 0.6 translation initiation factor Sui1 compare
PFLU_RS16710 +0.4 1.1 nitrite reductase small subunit NirD compare
PFLU_RS18710 +0.4 2.0 DUF3087 domain-containing protein compare
PFLU_RS18350 +0.4 0.7 GIY-YIG nuclease family protein compare
PFLU_RS22185 +0.4 1.5 hypothetical protein compare
PFLU_RS17595 +0.4 1.8 GDP-mannose pyrophosphatase compare
PFLU_RS11225 +0.4 1.4 5-carboxymethyl-2-hydroxymuconate Delta-isomerase compare
PFLU_RS15045 +0.4 1.9 glycosyl hydrolase compare
PFLU_RS05295 +0.4 1.8 carboxy-S-adenosyl-L-methionine synthase CmoA compare
PFLU_RS21360 +0.4 0.4 MarR family transcriptional regulator compare
PFLU_RS29670 +0.4 1.4 DUF1795 domain-containing protein compare
PFLU_RS11875 +0.4 1.4 general secretion pathway protein GspK compare
PFLU_RS02870 +0.4 1.7 N-acetyltransferase compare
PFLU_RS11650 +0.4 2.3 arabinose ABC transporter substrate-binding protein compare
PFLU_RS21795 +0.4 3.5 sigma-54-dependent Fis family transcriptional regulator compare
PFLU_RS16840 +0.4 1.6 DUF2834 domain-containing protein compare
PFLU_RS03980 +0.4 2.3 1,6-anhydro-N-acetylmuramyl-L-alanine amidase AmpD compare


Specific Phenotypes

For 4 genes in this experiment

For stress L-Glutamine in Pseudomonas fluorescens SBW25-INTG

For stress L-Glutamine across organisms