Experiment set13IT033 for Klebsiella michiganensis M5al

Compare to:

RCH2_defined_noCarbon with Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella and Glu_DLac_Acetate_mix 1 x

200 most important genes:

  gene name fitness t score description  
BWI76_RS01655 -8.4 -5.6 homoserine O-succinyltransferase compare
BWI76_RS18940 -8.0 -4.1 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS11965 -7.7 -3.5 orotidine-5'-phosphate decarboxylase compare
BWI76_RS18930 -7.3 -3.9 histidinol-phosphate transaminase compare
BWI76_RS04675 -7.2 -4.3 3-isopropylmalate dehydrogenase compare
BWI76_RS18925 -6.8 -3.2 histidinol dehydrogenase compare
BWI76_RS21465 -6.5 -3.2 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS20350 -6.2 -5.9 amidophosphoribosyltransferase compare
BWI76_RS24285 -6.2 -8.2 cystathionine beta-lyase compare
BWI76_RS01115 -5.9 -2.3 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS00990 -5.9 -6.1 ketol-acid reductoisomerase compare
BWI76_RS18920 -5.9 -2.7 ATP phosphoribosyltransferase compare
BWI76_RS00805 -5.9 -4.2 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS04470 -5.5 -7.6 carbamoyl phosphate synthase large subunit compare
BWI76_RS25115 -5.5 -7.9 argininosuccinate synthase compare
BWI76_RS26460 -5.5 -3.3 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS08385 -5.4 -2.1 citrate (Si)-synthase compare
BWI76_RS00845 -5.3 -7.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00855 -5.0 -7.6 argininosuccinate lyase compare
BWI76_RS04245 -4.9 -14.6 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS22625 -4.8 -1.1 transcriptional regulator compare
BWI76_RS11840 -4.8 -3.7 tryptophan synthase subunit alpha compare
BWI76_RS11255 -4.8 -1.9 putrescine/spermidine ABC transporter ATP-binding protein compare
BWI76_RS04665 -4.8 -15.6 3-isopropylmalate dehydratase small subunit compare
BWI76_RS00850 -4.7 -5.9 acetylglutamate kinase compare
BWI76_RS20965 -4.6 -2.6 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS20895 -4.6 -4.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00095 -4.6 -3.0 DNA-binding transcriptional regulator compare
BWI76_RS23265 -4.5 -1.4 hypothetical protein compare
BWI76_RS21100 -4.5 -1.5 nucleoside-diphosphate kinase compare
BWI76_RS18935 -4.5 -4.8 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS26000 -4.4 -7.3 aspartate aminotransferase family protein compare
BWI76_RS21475 -4.4 -2.4 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS09625 -4.4 -1.0 hypothetical protein compare
BWI76_RS19840 -4.3 -1.0 hypothetical protein compare
BWI76_RS01615 -4.2 -7.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS25870 -4.2 -1.0 elongation factor Tu compare
BWI76_RS04240 -4.2 -1.3 thr operon leader peptide compare
BWI76_RS04670 -4.2 -8.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04250 -4.2 -5.5 homoserine kinase compare
BWI76_RS11845 -4.2 -1.1 tryptophan synthase subunit beta compare
BWI76_RS08525 -4.2 -1.6 colicin transporter compare
BWI76_RS12495 -4.2 -1.0 2-Cys peroxiredoxin compare
BWI76_RS00980 -4.1 -7.1 PLP-dependent threonine dehydratase compare
BWI76_RS04685 -4.0 -9.1 putative leucine operon leader peptide compare
BWI76_RS27385 -4.0 -6.1 orotate phosphoribosyltransferase compare
BWI76_RS02995 -4.0 -5.7 aspartate carbamoyltransferase compare
BWI76_RS05840 -4.0 -2.4 glutamate 5-kinase compare
BWI76_RS05015 -4.0 -1.8 transcriptional regulator compare
BWI76_RS10990 -4.0 -1.5 dihydroorotase compare
BWI76_RS08520 -3.9 -1.5 colicin transporter TolQ compare
BWI76_RS09335 -3.9 -0.9 baseplate assembly protein W compare
BWI76_RS07065 -3.9 -5.4 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS11850 -3.8 -5.9 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00785 -3.8 -5.3 cystathionine gamma-synthase compare
BWI76_RS04255 -3.8 -5.8 threonine synthase compare
BWI76_RS18950 -3.8 -4.3 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS04680 -3.8 -9.3 2-isopropylmalate synthase compare
BWI76_RS00875 -3.7 -4.8 DNA-binding transcriptional regulator FabR compare
BWI76_RS04465 -3.7 -4.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS01630 -3.7 -0.8 16S ribosomal RNA compare
BWI76_RS23220 -3.7 -4.8 amino-acid N-acetyltransferase compare
BWI76_RS07510 -3.7 -2.5 hypothetical protein compare
BWI76_RS08535 -3.7 -1.4 translocation protein TolB compare
BWI76_RS14075 -3.6 -1.1 TetR family transcriptional regulator compare
BWI76_RS21070 -3.6 -1.4 outer membrane protein assembly factor BamB compare
BWI76_RS21265 -3.6 -8.4 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00965 -3.5 -0.8 acetolactate synthase 2 small subunit compare
BWI76_RS00975 -3.5 -7.5 dihydroxy-acid dehydratase compare
BWI76_RS20750 -3.5 -0.8 carboxysome structural protein EutK compare
BWI76_RS01610 -3.5 -5.0 phosphoribosylamine--glycine ligase compare
BWI76_RS09910 -3.5 -12.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS25600 -3.5 -0.8 tRNA-Thr compare
BWI76_RS21565 -3.5 -0.8 outer membrane protein assembly factor BamE compare
BWI76_RS16200 -3.5 -1.6 NAD(P) transhydrogenase subunit beta compare
BWI76_RS14770 -3.4 -0.8 PTS IIA 2 domain protein compare
BWI76_RS17975 -3.4 -3.0 tail-specific protease compare
BWI76_RS00835 -3.4 -8.2 phosphoenolpyruvate carboxylase compare
BWI76_RS25335 -3.4 -1.3 stringent starvation protein A compare
BWI76_RS04525 -3.3 -1.3 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS27390 -3.3 -4.7 ribonuclease PH compare
BWI76_RS21310 -3.3 -0.7 DNA repair protein RecO compare
BWI76_RS25920 -3.3 -1.3 peptidylprolyl isomerase compare
BWI76_RS09755 -3.3 -2.1 phosphoserine transaminase compare
BWI76_RS16490 -3.2 -1.3 glutaredoxin compare
BWI76_RS08530 -3.2 -1.0 protein TolA compare
BWI76_RS20380 -3.2 -0.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS11860 -3.2 -5.6 anthranilate synthase component I compare
BWI76_RS12870 -3.2 -2.1 putative phytanoyl-CoA dioxygenase compare
BWI76_RS23365 -3.2 -2.6 LysR family transcriptional regulator compare
BWI76_RS08380 -3.2 -1.0 endonuclease VIII compare
BWI76_RS11980 -3.1 -1.0 DeoR family transcriptional regulator compare
BWI76_RS05835 -3.1 -1.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS00355 -3.0 -1.1 DNA polymerase I compare
BWI76_RS23920 -3.0 -1.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS07785 -3.0 -0.9 transcriptional regulator compare
BWI76_RS16260 -2.9 -1.5 two-component sensor histidine kinase compare
BWI76_RS21980 -2.9 -1.8 hypothetical protein compare
BWI76_RS26570 -2.9 -1.7 anion permease compare
BWI76_RS21075 -2.9 -1.1 membrane protein compare
BWI76_RS08395 -2.9 -1.3 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS18165 -2.9 -0.9 NUDIX pyrophosphatase compare
BWI76_RS21115 -2.9 -1.8 3-mercaptopyruvate sulfurtransferase compare
BWI76_RS18955 -2.9 -3.8 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS11855 -2.9 -3.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS04270 -2.8 -2.8 transaldolase compare
BWI76_RS22765 -2.8 -7.2 sulfite reductase subunit alpha compare
BWI76_RS26620 -2.8 -0.6 Fe-S biogenesis protein NfuA compare
BWI76_RS12070 -2.8 -1.1 hypothetical protein compare
BWI76_RS01350 -2.7 -0.6 NAD(P)H-flavin reductase compare
BWI76_RS03010 -2.7 -4.8 ornithine carbamoyltransferase compare
BWI76_RS17530 -2.7 -2.0 hypothetical protein compare
BWI76_RS07070 -2.7 -3.3 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS15825 -2.7 -0.8 hypothetical protein compare
BWI76_RS09640 -2.7 -1.5 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS01800 -2.7 -1.6 glucose-6-phosphate isomerase compare
BWI76_RS23360 -2.6 -1.2 diaminopimelate decarboxylase compare
BWI76_RS13785 -2.6 -1.4 ABC transporter permease compare
BWI76_RS13480 -2.6 -1.0 XRE family transcriptional regulator compare
BWI76_RS22760 -2.6 -4.8 sulfite reductase subunit beta compare
BWI76_RS07780 -2.6 -1.1 hypothetical protein compare
BWI76_RS09655 -2.6 -3.1 leucine-responsive regulatory protein compare
BWI76_RS24075 -2.6 -2.2 glutathione synthase compare
BWI76_RS01095 -2.5 -2.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS20640 -2.5 -2.6 cysteine synthase A compare
BWI76_RS23760 -2.5 -1.5 tRNA-Gly compare
BWI76_RS00985 -2.5 -3.3 transcriptional regulator IlvY compare
BWI76_RS21675 -2.4 -0.8 hypothetical protein compare
BWI76_RS01385 -2.4 -1.3 potassium transporter compare
BWI76_RS20355 -2.4 -2.2 colicin V production protein compare
BWI76_RS24580 -2.4 -4.7 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS08210 -2.4 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS25645 -2.4 -3.6 shikimate dehydrogenase compare
BWI76_RS08020 -2.4 -4.1 serine-type D-Ala-D-Ala carboxypeptidase compare
BWI76_RS01210 -2.3 -0.9 tyrosine recombinase XerC compare
BWI76_RS08040 -2.2 -1.6 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS05235 -2.2 -1.0 hypothetical protein compare
BWI76_RS16555 -2.2 -3.1 hypothetical protein compare
BWI76_RS24900 -2.2 -1.0 DeoR family transcriptional regulator compare
BWI76_RS09670 -2.2 -2.2 recombination factor protein RarA compare
BWI76_RS02735 -2.2 -2.5 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS22805 -2.1 -5.4 GTP diphosphokinase compare
BWI76_RS26455 -2.1 -1.7 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS26055 -2.1 -4.7 siroheme synthase compare
BWI76_RS27440 -2.1 -1.4 DNA helicase RecG compare
BWI76_RS25060 -2.1 -2.9 lipoprotein NlpI compare
BWI76_RS09730 -2.1 -0.6 pyruvate formate lyase 1-activating protein compare
BWI76_RS09760 -2.1 -2.1 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS12750 -2.0 -2.9 hypothetical protein compare
BWI76_RS25315 -2.0 -6.6 glutamate synthase large subunit compare
BWI76_RS21370 -2.0 -0.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS05570 -2.0 -0.9 hypothetical protein compare
BWI76_RS00400 -2.0 -0.8 glutamine synthetase compare
BWI76_RS21810 -2.0 -0.8 universal stress protein compare
BWI76_RS17980 -2.0 -3.1 RNA chaperone ProQ compare
BWI76_RS14390 -2.0 -1.2 hypothetical protein compare
BWI76_RS01080 -1.9 -4.5 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS27780 -1.9 -1.6 hypothetical protein compare
BWI76_RS07465 -1.9 -0.8 TetR family transcriptional regulator compare
BWI76_RS11635 -1.9 -1.1 ABC transporter compare
BWI76_RS08405 -1.9 -2.1 succinate dehydrogenase flavoprotein subunit compare
BWI76_RS09190 -1.9 -1.3 hypothetical protein compare
BWI76_RS15110 -1.9 -4.7 putative excinuclease ABC subunit A compare
BWI76_RS06535 -1.8 -1.9 endopeptidase La compare
BWI76_RS05075 -1.8 -0.4 type II secretion system protein GspG compare
BWI76_RS09970 -1.8 -0.9 porin OmpA compare
BWI76_RS00240 -1.8 -0.8 FMN-binding protein MioC compare
BWI76_RS04100 -1.8 -1.7 peptide chain release factor 3 compare
BWI76_RS26245 -1.8 -3.1 transcriptional regulator compare
BWI76_RS16965 -1.8 -1.4 murein lipoprotein compare
BWI76_RS25280 -1.8 -0.9 RNase adaptor protein RapZ compare
BWI76_RS00390 -1.8 -3.1 two-component system sensor histidine kinase NtrB compare
BWI76_RS01110 -1.8 -2.3 TDP-fucosamine acetyltransferase compare
BWI76_RS25320 -1.8 -5.2 glutamate synthase compare
BWI76_RS08275 -1.8 -1.3 LexA regulated protein compare
BWI76_RS09615 -1.7 -1.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS13445 -1.7 -1.3 alpha/beta hydrolase compare
BWI76_RS05120 -1.7 -4.0 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS04645 -1.7 -2.0 3-dehydroquinase compare
BWI76_RS01070 -1.7 -4.7 thiol reductase thioredoxin compare
BWI76_RS22755 -1.7 -2.8 phosphoadenosine phosphosulfate reductase compare
BWI76_RS15810 -1.7 -4.9 hypothetical protein compare
BWI76_RS11250 -1.7 -1.5 spermidine/putrescine ABC transporter permease PotB compare
BWI76_RS17290 -1.7 -3.3 formyltetrahydrofolate deformylase compare
BWI76_RS14670 -1.7 -1.2 hypothetical protein compare
BWI76_RS03295 -1.7 -1.0 transposase compare
BWI76_RS02775 -1.6 -2.0 outer membrane protein assembly factor compare
BWI76_RS10305 -1.6 -3.9 transposase compare
BWI76_RS08205 -1.6 -2.3 DNA-binding transcriptional dual regulator NagC compare
BWI76_RS01220 -1.6 -2.8 DNA-dependent helicase II compare
BWI76_RS02725 -1.6 -0.7 HxlR family transcriptional regulator compare
BWI76_RS17190 -1.6 -1.6 TonB system transport protein TonB compare
BWI76_RS02580 -1.6 -0.6 23S rRNA (guanosine(2251)-2'-O)-methyltransferase compare
BWI76_RS24275 -1.6 -1.4 biopolymer transport protein ExbD compare
BWI76_RS24600 -1.6 -1.1 dihydroxyacetone kinase compare
BWI76_RS10350 -1.6 -5.7 EamA family transporter compare
BWI76_RS06295 -1.6 -2.1 S-adenosylmethionine:tRNA ribosyltransferase-isomerase compare
BWI76_RS16375 -1.5 -1.4 electron transport complex subunit G compare
BWI76_RS17195 -1.5 -1.4 hypothetical protein compare
BWI76_RS16240 -1.5 -2.5 anti-adapter protein IraM compare


Specific Phenotypes

For 1 genes in this experiment

For mixed community Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella in Klebsiella michiganensis M5al

For mixed community Mixed culture; Microbacterium sp. AnTP90 3:1 starting OD to Klebsiella across organisms