Experiment set13IT021 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Sodium nitrate 20 mM

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -8.7 -4.7 histidinol-phosphate transaminase compare
BWI76_RS20965 -8.1 -4.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS18940 -7.9 -5.4 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS18950 -7.5 -4.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS07065 -6.7 -6.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS04255 -6.5 -10.0 threonine synthase compare
BWI76_RS21265 -6.3 -15.8 phosphoribosylformylglycinamidine synthase compare
BWI76_RS02995 -6.1 -7.3 aspartate carbamoyltransferase compare
BWI76_RS18935 -6.1 -10.2 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS18955 -6.0 -4.1 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00990 -6.0 -10.9 ketol-acid reductoisomerase compare
BWI76_RS27385 -5.9 -5.7 orotate phosphoribosyltransferase compare
BWI76_RS01615 -5.8 -9.7 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS18920 -5.8 -3.5 ATP phosphoribosyltransferase compare
BWI76_RS04250 -5.7 -7.1 homoserine kinase compare
BWI76_RS18925 -5.6 -6.2 histidinol dehydrogenase compare
BWI76_RS26460 -5.6 -3.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26425 -5.6 -8.5 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS23220 -5.6 -8.4 amino-acid N-acetyltransferase compare
BWI76_RS20350 -5.6 -8.5 amidophosphoribosyltransferase compare
BWI76_RS00850 -5.6 -7.9 acetylglutamate kinase compare
BWI76_RS25115 -5.5 -7.9 argininosuccinate synthase compare
BWI76_RS20895 -5.5 -3.8 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS00855 -5.4 -9.7 argininosuccinate lyase compare
BWI76_RS00835 -5.3 -15.3 phosphoenolpyruvate carboxylase compare
BWI76_RS20355 -5.2 -4.3 colicin V production protein compare
BWI76_RS04245 -5.2 -17.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS25700 -5.0 -7.6 heavy metal-responsive transcriptional regulator compare
BWI76_RS04470 -5.0 -8.9 carbamoyl phosphate synthase large subunit compare
BWI76_RS00980 -4.9 -13.3 PLP-dependent threonine dehydratase compare
BWI76_RS01610 -4.8 -7.8 phosphoribosylamine--glycine ligase compare
BWI76_RS00975 -4.8 -7.5 dihydroxy-acid dehydratase compare
BWI76_RS26455 -4.8 -2.1 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS26000 -4.8 -9.5 aspartate aminotransferase family protein compare
BWI76_RS00805 -4.8 -4.6 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS11840 -4.7 -3.9 tryptophan synthase subunit alpha compare
BWI76_RS25645 -4.7 -4.5 shikimate dehydrogenase compare
BWI76_RS25070 -4.7 -1.5 hypothetical protein compare
BWI76_RS01275 -4.6 -8.0 LysR family transcriptional regulator compare
BWI76_RS26390 -4.6 -8.0 cell division protein FtsX compare
BWI76_RS17980 -4.6 -4.1 RNA chaperone ProQ compare
BWI76_RS11850 -4.6 -8.7 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00845 -4.6 -9.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS08385 -4.6 -3.5 citrate (Si)-synthase compare
BWI76_RS04465 -4.5 -6.3 carbamoyl-phosphate synthase small subunit compare
BWI76_RS03010 -4.5 -10.9 ornithine carbamoyltransferase compare
BWI76_RS01655 -4.5 -10.7 homoserine O-succinyltransferase compare
BWI76_RS23265 -4.5 -2.0 hypothetical protein compare
BWI76_RS00785 -4.5 -8.0 cystathionine gamma-synthase compare
BWI76_RS24285 -4.4 -7.8 cystathionine beta-lyase compare
BWI76_RS09760 -4.4 -3.0 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS01095 -4.3 -3.1 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS12070 -4.3 -1.4 hypothetical protein compare
BWI76_RS04670 -4.3 -11.4 3-isopropylmalate dehydratase large subunit compare
BWI76_RS19840 -4.2 -1.3 hypothetical protein compare
BWI76_RS20390 -4.2 -2.2 erythronate-4-phosphate dehydrogenase compare
BWI76_RS09910 -4.2 -14.4 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS04675 -4.2 -7.9 3-isopropylmalate dehydrogenase compare
BWI76_RS05260 -4.1 -1.3 chaperone compare
BWI76_RS27390 -4.1 -5.4 ribonuclease PH compare
BWI76_RS05015 -4.1 -2.5 transcriptional regulator compare
BWI76_RS04665 -4.1 -17.1 3-isopropylmalate dehydratase small subunit compare
BWI76_RS08525 -4.1 -2.1 colicin transporter compare
BWI76_RS05840 -4.0 -2.8 glutamate 5-kinase compare
BWI76_RS22765 -4.0 -8.1 sulfite reductase subunit alpha compare
BWI76_RS07070 -4.0 -3.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS11965 -4.0 -4.5 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04240 -4.0 -2.2 thr operon leader peptide compare
BWI76_RS04685 -3.8 -10.5 putative leucine operon leader peptide compare
BWI76_RS08520 -3.8 -2.0 colicin transporter TolQ compare
BWI76_RS17975 -3.8 -5.0 tail-specific protease compare
BWI76_RS11845 -3.7 -1.7 tryptophan synthase subunit beta compare
BWI76_RS00965 -3.7 -1.1 acetolactate synthase 2 small subunit compare
BWI76_RS21165 -3.7 -1.6 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS10990 -3.7 -1.7 dihydroorotase compare
BWI76_RS11855 -3.6 -10.7 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS26395 -3.6 -9.1 cell division protein FtsE compare
BWI76_RS22760 -3.6 -6.8 sulfite reductase subunit beta compare
BWI76_RS21070 -3.5 -1.8 outer membrane protein assembly factor BamB compare
BWI76_RS11860 -3.5 -7.5 anthranilate synthase component I compare
BWI76_RS08535 -3.5 -1.9 translocation protein TolB compare
BWI76_RS11300 -3.5 -1.1 cupin compare
BWI76_RS25335 -3.5 -1.8 stringent starvation protein A compare
BWI76_RS09645 -3.5 -1.1 thioredoxin-disulfide reductase compare
BWI76_RS23365 -3.5 -2.7 LysR family transcriptional regulator compare
BWI76_RS04525 -3.5 -1.8 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS21340 -3.5 -2.3 SoxR reducing system protein RseC compare
BWI76_RS21475 -3.3 -3.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS04680 -3.3 -8.5 2-isopropylmalate synthase compare
BWI76_RS04160 -3.3 -3.6 phosphoserine phosphatase compare
BWI76_RS22755 -3.3 -3.1 phosphoadenosine phosphosulfate reductase compare
BWI76_RS08395 -3.2 -1.7 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS04845 -3.2 -7.8 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS05835 -3.2 -1.9 gamma-glutamyl-phosphate reductase compare
BWI76_RS01115 -3.1 -2.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS08580 -3.1 -3.8 quinolinate synthetase compare
BWI76_RS20380 -3.1 -1.0 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS08530 -3.1 -1.4 protein TolA compare
BWI76_RS23920 -3.1 -2.0 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09655 -3.0 -4.8 leucine-responsive regulatory protein compare
BWI76_RS06535 -3.0 -2.0 endopeptidase La compare
BWI76_RS19770 -3.0 -1.3 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS01220 -2.9 -5.3 DNA-dependent helicase II compare
BWI76_RS26620 -2.9 -0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS12790 -2.9 -1.3 lactate dehydrogenase compare
BWI76_RS00345 -2.9 -4.3 protein disulfide oxidoreductase DsbA compare
BWI76_RS24340 -2.9 -7.6 two-component sensor histidine kinase compare
BWI76_RS23490 -2.9 -7.9 fimbrial protein compare
BWI76_RS04645 -2.8 -3.3 3-dehydroquinase compare
BWI76_RS01800 -2.8 -1.9 glucose-6-phosphate isomerase compare
BWI76_RS21465 -2.8 -4.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS09755 -2.8 -2.7 phosphoserine transaminase compare
BWI76_RS23360 -2.7 -1.6 diaminopimelate decarboxylase compare
BWI76_RS01110 -2.7 -4.7 TDP-fucosamine acetyltransferase compare
BWI76_RS02815 -2.7 -1.4 fructose-bisphosphatase class I compare
BWI76_RS19375 -2.7 -1.9 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS16965 -2.6 -2.1 murein lipoprotein compare
BWI76_RS00875 -2.6 -5.3 DNA-binding transcriptional regulator FabR compare
BWI76_RS19700 -2.6 -2.9 deoxyribonuclease IV compare
BWI76_RS10745 -2.5 -1.1 hypothetical protein compare
BWI76_RS00960 -2.5 -4.2 acetolactate synthase 2 catalytic subunit compare
BWI76_RS01950 -2.5 -14.7 excinuclease ABC subunit A conserved
BWI76_RS20150 -2.5 -1.8 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS24605 -2.5 -4.9 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS26470 -2.5 -4.9 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS24580 -2.5 -4.9 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS01125 -2.4 -6.1 4-alpha-L-fucosyltransferase compare
BWI76_RS24595 -2.4 -2.9 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS01210 -2.4 -1.2 tyrosine recombinase XerC compare
BWI76_RS26055 -2.4 -7.7 siroheme synthase compare
BWI76_RS07465 -2.4 -0.9 TetR family transcriptional regulator compare
BWI76_RS04990 -2.4 -6.4 pantoate--beta-alanine ligase compare
BWI76_RS15825 -2.3 -1.0 hypothetical protein compare
BWI76_RS00720 -2.3 -2.3 DNA-binding response regulator compare
BWI76_RS18330 -2.3 -8.3 excinuclease ABC subunit C conserved
BWI76_RS08210 -2.3 -1.0 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS08495 -2.3 -3.9 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS27440 -2.2 -1.5 DNA helicase RecG compare
BWI76_RS00355 -2.2 -2.0 DNA polymerase I compare
BWI76_RS25280 -2.2 -1.3 RNase adaptor protein RapZ compare
BWI76_RS05450 -2.2 -0.8 ribonuclease HI compare
BWI76_RS10935 -2.2 -3.9 glucan biosynthesis glucosyltransferase H compare
BWI76_RS08785 -2.2 -8.7 excinuclease ABC subunit B conserved
BWI76_RS24885 -2.2 -1.1 PTS galactitol transporter subunit IIB compare
BWI76_RS00400 -2.2 -1.1 glutamine synthetase compare
BWI76_RS20740 -2.2 -4.7 coproporphyrinogen III oxidase compare
BWI76_RS21360 -2.1 -6.6 L-aspartate oxidase compare
BWI76_RS16895 -2.1 -1.5 3-(3-hydroxy-phenyl)propionate transporter MhpT compare
BWI76_RS22690 -2.1 -1.9 adenylyl-sulfate kinase compare
BWI76_RS16425 -2.0 -2.9 hypothetical protein compare
BWI76_RS09825 -2.0 -4.0 envelope biogenesis factor ElyC compare
BWI76_RS08760 -2.0 -5.5 biotin synthase compare
BWI76_RS16920 -2.0 -1.2 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS16200 -2.0 -1.6 NAD(P) transhydrogenase subunit beta compare
BWI76_RS00985 -2.0 -4.8 transcriptional regulator IlvY compare
BWI76_RS09640 -2.0 -1.9 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS04715 -2.0 -2.4 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS08380 -2.0 -1.5 endonuclease VIII compare
BWI76_RS00240 -2.0 -1.2 FMN-binding protein MioC compare
BWI76_RS16910 -2.0 -2.0 2-keto-4-pentenoate hydratase compare
BWI76_RS02735 -1.9 -2.1 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS20440 -1.9 -1.9 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS20640 -1.9 -3.4 cysteine synthase A compare
BWI76_RS00970 -1.9 -2.6 branched chain amino acid aminotransferase compare
BWI76_RS09730 -1.9 -0.8 pyruvate formate lyase 1-activating protein compare
BWI76_RS03660 -1.8 -2.9 hypothetical protein compare
BWI76_RS24900 -1.8 -1.5 DeoR family transcriptional regulator compare
BWI76_RS06405 -1.8 -2.4 2-dehydropantoate 2-reductase compare
BWI76_RS03295 -1.8 -1.5 transposase compare
BWI76_RS15760 -1.8 -1.6 hypothetical protein compare
BWI76_RS01550 -1.8 -5.1 thiamine phosphate synthase compare
BWI76_RS13160 -1.8 -1.3 azoreductase compare
BWI76_RS17720 -1.8 -0.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS22695 -1.8 -3.3 sulfate adenylyltransferase compare
BWI76_RS26570 -1.8 -1.7 anion permease compare
BWI76_RS05120 -1.8 -6.6 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS17045 -1.7 -1.4 hypothetical protein compare
BWI76_RS09335 -1.7 -0.9 baseplate assembly protein W compare
BWI76_RS21350 -1.7 -1.7 anti-RNA polymerase sigma factor SigE compare
BWI76_RS04985 -1.7 -5.3 aspartate 1-decarboxylase compare
BWI76_RS22805 -1.7 -8.3 GTP diphosphokinase compare
BWI76_RS19685 -1.7 -3.9 lysine transporter compare
BWI76_RS05915 -1.7 -3.0 helix-turn-helix transcriptional regulator compare
BWI76_RS02530 -1.7 -1.1 tRNA dimethylallyltransferase compare
BWI76_RS08040 -1.7 -1.6 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS01135 -1.6 -3.5 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS10305 -1.6 -5.9 transposase compare
BWI76_RS08500 -1.6 -1.5 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS15110 -1.6 -2.9 putative excinuclease ABC subunit A compare
BWI76_RS09970 -1.6 -1.1 porin OmpA compare
BWI76_RS01350 -1.6 -0.7 NAD(P)H-flavin reductase compare
BWI76_RS08605 -1.6 -1.5 phosphoglyceromutase compare
BWI76_RS26095 -1.6 -0.7 shikimate kinase compare
BWI76_RS05005 -1.6 -1.9 polynucleotide adenylyltransferase compare
BWI76_RS16375 -1.6 -1.6 electron transport complex subunit G compare
BWI76_RS16555 -1.6 -2.8 hypothetical protein compare
BWI76_RS10480 -1.6 -6.6 amino acid ABC transporter substrate-binding protein compare
BWI76_RS22700 -1.6 -4.9 sulfate adenylyltransferase subunit 2 compare
BWI76_RS00715 -1.5 -1.0 two-component sensor histidine kinase compare
BWI76_RS22420 -1.5 -2.1 LacI family transcriptional regulator compare


Specific Phenotypes

For 10 genes in this experiment

For stress Sodium nitrate in Klebsiella michiganensis M5al

For stress Sodium nitrate across organisms