Experiment set13IT021 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Sodium nitrate 20 mM

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS02655 +3.2 11.9 hypothetical protein compare
BWI76_RS16360 +2.6 2.7 electron transport complex subunit RsxB compare
BWI76_RS00325 +1.9 1.6 molybdopterin-guanine dinucleotide biosynthesis protein MobB compare
BWI76_RS23895 +1.7 2.7 Xaa-Pro aminopeptidase compare
BWI76_RS21660 +1.6 3.1 antirestriction protein compare
BWI76_RS14770 +1.6 1.4 PTS IIA 2 domain protein compare
BWI76_RS11335 +1.4 2.1 tautomerase compare
BWI76_RS25000 +1.4 1.9 malonate decarboxylase acyl carrier protein compare
BWI76_RS16975 +1.3 1.2 cysteine desufuration protein SufE compare
BWI76_RS15845 +1.3 1.2 hypothetical protein compare
BWI76_RS23020 +1.3 3.0 cobalamin biosynthesis protein CbiQ compare
BWI76_RS13330 +1.3 1.5 tellurite resistance methyltransferase TehB compare
BWI76_RS23515 +1.3 0.8 antibiotic biosynthesis monooxygenase compare
BWI76_RS16470 +1.3 2.3 transcriptional repressor NemR compare
BWI76_RS13170 +1.2 1.4 methyltransferase compare
BWI76_RS01995 +1.2 2.0 AraC family transcriptional regulator compare
BWI76_RS14840 +1.2 4.9 hypothetical protein compare
BWI76_RS27455 +1.2 3.3 DUF805 domain-containing protein compare
BWI76_RS25375 +1.1 3.4 hypothetical protein compare
BWI76_RS09065 +1.1 4.5 sugar phosphatase SupH compare
BWI76_RS16315 +1.1 1.2 SirA-like protein compare
BWI76_RS11170 +1.1 1.2 hypothetical protein compare
BWI76_RS17860 +1.1 1.5 YoaH family protein compare
BWI76_RS12615 +1.1 2.1 LysR family transcriptional regulator compare
BWI76_RS09520 +1.0 1.6 arginine ABC transporter ATP-binding protein ArtP compare
BWI76_RS22935 +1.0 1.2 L-fucose mutarotase compare
BWI76_RS12965 +1.0 4.0 LysR family transcriptional regulator compare
BWI76_RS01380 +1.0 1.7 YigZ family protein compare
BWI76_RS15035 +1.0 1.7 metal ABC transporter permease compare
BWI76_RS10295 +1.0 1.5 short chain dehydrogenase/reductase family oxidoreductase compare
BWI76_RS12500 +1.0 3.1 dipeptide epimerase compare
BWI76_RS11525 +1.0 2.4 HNH endonuclease compare
BWI76_RS13180 +1.0 1.9 multidrug transporter EmrA compare
BWI76_RS14975 +0.9 3.6 glyoxalase-like domain protein compare
BWI76_RS25425 +0.9 0.8 arginine repressor compare
BWI76_RS17900 +0.9 2.3 PTS mannose transporter subunit IID compare
BWI76_RS23015 +0.9 1.6 cobalt transporter ATP-binding subunit compare
BWI76_RS06475 +0.9 1.1 protoheme IX farnesyltransferase compare
BWI76_RS09515 +0.9 1.7 arginine ABC transporter substrate-binding protein compare
BWI76_RS26065 +0.9 1.5 phosphoglycolate phosphatase compare
BWI76_RS11700 +0.9 1.1 hypothetical protein compare
BWI76_RS24810 +0.9 2.3 hypothetical protein compare
BWI76_RS08615 +0.9 3.5 galactokinase compare
BWI76_RS12885 +0.9 3.2 hypothetical protein compare
BWI76_RS19145 +0.9 2.2 formate dehydrogenase cytochrome b556 subunit compare
BWI76_RS06910 +0.9 1.6 transcriptional regulator compare
BWI76_RS21445 +0.8 1.7 hypothetical protein compare
BWI76_RS11675 +0.8 1.7 arginine N-succinyltransferase compare
BWI76_RS08855 +0.8 1.7 endonuclease/exonuclease/phosphatase compare
BWI76_RS17400 +0.8 1.0 transporter compare
BWI76_RS11260 +0.8 1.4 hypothetical protein compare
BWI76_RS14435 +0.8 1.5 glutamine ABC transporter ATP-binding protein compare
BWI76_RS24945 +0.8 1.4 glutamine amidotransferase compare
BWI76_RS14680 +0.8 3.1 SefF compare
BWI76_RS03005 +0.8 1.8 hypothetical protein compare
BWI76_RS06340 +0.8 2.0 hypothetical protein compare
BWI76_RS20560 +0.8 2.2 hypothetical protein compare
BWI76_RS25865 +0.8 2.8 ferredoxin compare
BWI76_RS20930 +0.8 1.9 arsenate reductase (glutaredoxin) compare
BWI76_RS02020 +0.8 2.8 Na+/H+ antiporter compare
BWI76_RS11125 +0.8 1.2 metal-dependent hydrolase compare
BWI76_RS06230 +0.8 3.3 DNA-binding response regulator compare
BWI76_RS01325 +0.8 1.5 twin-arginine translocase subunit TatB compare
BWI76_RS15285 +0.8 2.6 stress protection protein MarC compare
BWI76_RS14155 +0.8 1.8 transketolase compare
BWI76_RS00340 +0.8 1.9 stress response kinase A compare
BWI76_RS10730 +0.8 1.8 bifunctional glucose-1-phosphatase/inositol phosphatase compare
BWI76_RS17405 +0.8 1.8 cation transport regulator compare
BWI76_RS24770 +0.8 1.3 hypothetical protein compare
BWI76_RS09530 +0.8 0.8 hypothetical protein compare
BWI76_RS09035 +0.8 3.1 protein tyrosine/serine phosphatase compare
BWI76_RS14970 +0.8 1.1 pyrroline-5-carboxylate reductase compare
BWI76_RS05165 +0.8 2.7 cobalamin-binding protein compare
BWI76_RS15790 +0.7 2.8 replication protein compare
BWI76_RS17210 +0.7 2.2 dsDNA-mimic protein compare
BWI76_RS20430 +0.7 2.5 penicillin-insensitive murein endopeptidase compare
BWI76_RS25630 +0.7 2.5 hypothetical protein compare
BWI76_RS01285 +0.7 3.3 amino acid ABC transporter substrate-binding protein compare
BWI76_RS24240 +0.7 1.9 hypothetical protein compare
BWI76_RS16080 +0.7 3.2 LysR family transcriptional regulator compare
BWI76_RS13215 +0.7 1.3 type I glyceraldehyde-3-phosphate dehydrogenase compare
BWI76_RS00025 +0.7 1.1 hypothetical protein compare
BWI76_RS08120 +0.7 2.5 cobalt transporter compare
BWI76_RS16030 +0.7 2.5 malonate decarboxylase acyl carrier protein compare
BWI76_RS13810 +0.7 2.8 MarR family transcriptional regulator compare
BWI76_RS06735 +0.7 1.4 50S ribosomal protein L31 compare
BWI76_RS00425 +0.7 1.5 D-tyrosyl-tRNA(Tyr) deacylase compare
BWI76_RS07885 +0.7 2.1 sugar ABC transporter permease compare
BWI76_RS11920 +0.7 2.0 hypothetical protein compare
BWI76_RS08220 +0.7 3.9 PTS N-acetyl glucosamine transporter subunit IIABC compare
BWI76_RS25160 +0.7 1.7 transcription elongation factor GreA compare
BWI76_RS11980 +0.7 0.6 DeoR family transcriptional regulator compare
BWI76_RS13205 +0.7 1.8 hypothetical protein compare
BWI76_RS11735 +0.7 1.7 PTS N,N'-diacetylchitobiose transporter subunit IIA compare
BWI76_RS04895 +0.7 1.7 hypothetical protein compare
BWI76_RS02585 +0.7 2.5 hypothetical protein compare
BWI76_RS12590 +0.7 2.4 helix-turn-helix-type transcriptional regulator compare
BWI76_RS18175 +0.7 3.2 hydrolase compare
BWI76_RS11815 +0.7 0.8 hypothetical protein compare
BWI76_RS17310 +0.7 1.9 AsnC family transcriptional regulator compare
BWI76_RS04545 +0.7 2.7 two-component response regulator for citrate compare
BWI76_RS20145 +0.7 0.9 NADH-quinone oxidoreductase subunit K compare
BWI76_RS15795 +0.7 1.7 bacteriophage CII family protein compare
BWI76_RS11240 +0.7 2.3 spermidine/putrescine ABC transporter substrate-binding protein PotD compare
BWI76_RS03920 +0.7 1.2 N-acetyltransferase compare
BWI76_RS25285 +0.7 0.8 HPr family phosphocarrier protein compare
BWI76_RS22280 +0.7 1.5 formate dehydrogenase-H ferredoxin subunit compare
BWI76_RS17885 +0.7 2.6 hypothetical protein compare
BWI76_RS07165 +0.7 2.1 hypothetical protein compare
BWI76_RS03180 +0.7 1.5 phage transcriptional regulator, AlpA compare
BWI76_RS01895 +0.7 1.8 cupin compare
BWI76_RS27745 +0.7 1.7 PTS sugar transporter subunit IIB compare
BWI76_RS25945 +0.7 2.7 ABC transporter ATP-binding protein compare
BWI76_RS16170 +0.7 2.3 amidohydrolase compare
BWI76_RS20050 +0.7 1.3 hypothetical protein compare
BWI76_RS02800 +0.7 1.8 ABC transporter compare
BWI76_RS23030 +0.7 1.2 cobalamin biosynthesis protein CbiM compare
BWI76_RS15800 +0.7 1.7 transcriptional regulator compare
BWI76_RS20915 +0.7 4.4 peroxiredoxin compare
BWI76_RS16690 +0.6 1.9 peptide ABC transporter permease compare
BWI76_RS12610 +0.6 0.9 LysR family transcriptional regulator compare
BWI76_RS10565 +0.6 2.9 sugar isomerase compare
BWI76_RS08450 +0.6 2.8 fumarate hydratase compare
BWI76_RS06950 +0.6 3.1 ABC transporter ATP-binding protein compare
BWI76_RS07820 +0.6 1.1 S-methyl-5-thioribose kinase compare
BWI76_RS14610 +0.6 0.7 putative hydrolase compare
BWI76_RS16660 +0.6 1.9 SfnB family sulfur acquisition oxidoreductase compare
BWI76_RS15445 +0.6 1.3 hypothetical protein compare
BWI76_RS22215 +0.6 3.1 PTS sorbitol transporter subunit IIC compare
BWI76_RS25980 +0.6 2.1 hypothetical protein compare
BWI76_RS12825 +0.6 1.5 hypothetical protein compare
BWI76_RS16235 +0.6 1.4 membrane protein compare
BWI76_RS10320 +0.6 1.5 alpha-glucosidase/alpha-galactosidase compare
BWI76_RS16095 +0.6 1.9 thiamine biosynthesis protein ApbE compare
BWI76_RS06015 +0.6 0.6 hypothetical protein compare
BWI76_RS13840 +0.6 1.8 MBL fold metallo-hydrolase compare
BWI76_RS15900 +0.6 2.2 hypothetical protein compare
BWI76_RS17155 +0.6 1.2 hypothetical protein compare
BWI76_RS05895 +0.6 2.3 phosphonate ABC transporter, permease protein PhnE compare
BWI76_RS09455 +0.6 1.4 YbjN domain-containing protein compare
BWI76_RS19600 +0.6 2.0 hypothetical protein compare
BWI76_RS22310 +0.6 1.6 hydrogenase 3 small subunit compare
BWI76_RS03835 +0.6 1.6 4-hydroxyphenylacetate catabolism regulatory protein HpaA compare
BWI76_RS08845 +0.6 1.2 hypothetical protein compare
BWI76_RS00950 +0.6 3.2 ATP-dependent protease compare
BWI76_RS13955 +0.6 1.1 hypothetical protein compare
BWI76_RS14935 +0.6 0.7 NIPSNAP family containing protein compare
BWI76_RS03045 +0.6 1.2 hypothetical protein compare
BWI76_RS00650 +0.6 2.8 rhamnose ABC transporter permease component compare
BWI76_RS07475 +0.6 1.0 DNA-binding transcriptional regulator RamA compare
BWI76_RS11825 +0.6 2.0 LysR family transcriptional regulator compare
BWI76_RS20020 +0.6 2.1 nucleoside triphosphatase NudI compare
BWI76_RS20940 +0.6 1.8 uracil/xanthine transporter compare
BWI76_RS11710 +0.6 1.8 nucleotide excision repair endonuclease compare
BWI76_RS19365 +0.6 2.3 ribulokinase compare
BWI76_RS06280 +0.6 2.6 hypothetical protein compare
BWI76_RS24625 +0.6 2.8 hypothetical protein compare
BWI76_RS13355 +0.6 2.0 AraC family transcriptional regulator compare
BWI76_RS11770 +0.6 1.0 hypothetical protein compare
BWI76_RS15080 +0.6 5.2 hypothetical protein compare
BWI76_RS19480 +0.6 1.2 transcriptional regulator compare
BWI76_RS13290 +0.6 1.2 protocatechuate 3,4-dioxygenase subunit beta compare
BWI76_RS15075 +0.6 2.6 non-ribosomal peptide synthase compare
BWI76_RS19390 +0.6 1.7 LysR family transcriptional regulator compare
BWI76_RS18845 +0.6 2.2 nitrogen fixation protein NifX compare
BWI76_RS06435 +0.6 2.3 MFS transporter compare
BWI76_RS13370 +0.6 1.1 hypothetical protein compare
BWI76_RS04320 +0.6 1.4 transcriptional activator NhaR compare
BWI76_RS19100 +0.6 1.3 putative acid phosphatase compare
BWI76_RS04215 +0.6 2.8 DNA-binding response regulator compare
BWI76_RS27950 +0.6 1.9 transcriptional regulator compare
BWI76_RS10985 +0.6 2.8 DNA damage-inducible protein I compare
BWI76_RS21210 +0.6 4.0 hypothetical protein compare
BWI76_RS19090 +0.6 4.4 polysaccharide export protein Wza compare
BWI76_RS21040 +0.6 1.8 peptidase M4 compare
BWI76_RS26435 +0.6 2.2 hypothetical protein compare
BWI76_RS00830 +0.6 2.2 metal-binding protein ZinT compare
BWI76_RS02940 +0.6 1.9 RpiR family transcriptional regulator compare
BWI76_RS24270 +0.6 1.4 membrane protein compare
BWI76_RS07950 +0.6 3.0 universal stress protein G compare
BWI76_RS19565 +0.6 1.8 tRNA dihydrouridine(16) synthase DusC compare
BWI76_RS00565 +0.6 1.5 branched-chain amino acid transport compare
BWI76_RS16015 +0.6 1.9 pheromone autoinducer 2 transporter compare
BWI76_RS23960 +0.6 2.3 oxidative stress defense protein compare
BWI76_RS22930 +0.6 2.6 L-fuculokinase (EC 2.7.1.51) (from data) compare
BWI76_RS13125 +0.6 1.7 3-hydroxyacyl-CoA dehydrogenase compare
BWI76_RS01805 +0.6 1.9 UDP-3-O-(3-hydroxymyristoyl)glucosamine N-acyltransferase compare
BWI76_RS03105 +0.6 0.7 myo-inosose-2 dehydratase compare
BWI76_RS09680 +0.6 1.5 dimethyl sulfoxide reductase subunit A compare
BWI76_RS00470 +0.6 2.7 sulfate ABC transporter substrate-binding protein compare
BWI76_RS21885 +0.6 2.7 AP endonuclease, family 2 compare
BWI76_RS21020 +0.6 3.1 MFS transporter compare
BWI76_RS08620 +0.6 2.0 galactose-1-phosphate uridylyltransferase compare
BWI76_RS14670 +0.6 0.8 hypothetical protein compare
BWI76_RS15085 +0.6 3.2 3-deoxy-D-arabinose-heptulosonic-7-phosphate synthase compare
BWI76_RS20320 +0.6 2.1 histidine/lysine/arginine/ornithine ABC transporter ATP-binding protein HisP compare
BWI76_RS04200 +0.6 1.7 phosphoglycerate mutase GpmB compare
BWI76_RS27510 +0.6 2.6 aquaporin compare
BWI76_RS16175 +0.6 1.6 p-aminobenzoyl-glutamate transporter compare
BWI76_RS21220 +0.6 1.8 membrane protein compare


Specific Phenotypes

For 10 genes in this experiment

For stress Sodium nitrate in Klebsiella michiganensis M5al

For stress Sodium nitrate across organisms