Experiment set13IT015 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Vancomycin Hydrochloride Hydrate 0.01 mg/mL

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -8.9 -3.7 histidinol-phosphate transaminase compare
BWI76_RS20965 -8.4 -3.4 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS18940 -7.3 -5.2 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS20355 -7.1 -2.9 colicin V production protein compare
BWI76_RS04250 -6.3 -8.0 homoserine kinase compare
BWI76_RS02995 -6.0 -7.8 aspartate carbamoyltransferase compare
BWI76_RS25700 -6.0 -6.9 heavy metal-responsive transcriptional regulator compare
BWI76_RS00855 -5.9 -9.8 argininosuccinate lyase compare
BWI76_RS01610 -5.9 -9.2 phosphoribosylamine--glycine ligase compare
BWI76_RS20895 -5.7 -3.5 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS21265 -5.7 -13.7 phosphoribosylformylglycinamidine synthase compare
BWI76_RS26460 -5.7 -3.5 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS26425 -5.6 -8.6 zinc/cadmium/mercury/lead-transporting ATPase compare
BWI76_RS07065 -5.6 -8.2 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS25115 -5.5 -9.4 argininosuccinate synthase compare
BWI76_RS18935 -5.3 -7.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS04245 -5.3 -16.3 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS23220 -5.3 -11.7 amino-acid N-acetyltransferase compare
BWI76_RS04470 -5.2 -11.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS20350 -5.2 -8.3 amidophosphoribosyltransferase compare
BWI76_RS04465 -5.1 -5.4 carbamoyl-phosphate synthase small subunit compare
BWI76_RS18955 -5.1 -4.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS00785 -5.1 -6.0 cystathionine gamma-synthase compare
BWI76_RS11850 -5.0 -10.8 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00975 -4.9 -15.5 dihydroxy-acid dehydratase compare
BWI76_RS18920 -4.9 -3.1 ATP phosphoribosyltransferase compare
BWI76_RS01615 -4.9 -12.5 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS02775 -4.8 -6.3 outer membrane protein assembly factor compare
BWI76_RS26455 -4.8 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS04255 -4.8 -13.1 threonine synthase compare
BWI76_RS11840 -4.8 -3.7 tryptophan synthase subunit alpha compare
BWI76_RS00845 -4.8 -13.7 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS27390 -4.7 -5.8 ribonuclease PH compare
BWI76_RS04675 -4.7 -6.2 3-isopropylmalate dehydrogenase compare
BWI76_RS07070 -4.7 -3.6 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00850 -4.6 -9.0 acetylglutamate kinase compare
BWI76_RS23265 -4.6 -1.5 hypothetical protein compare
BWI76_RS27385 -4.6 -7.4 orotate phosphoribosyltransferase compare
BWI76_RS12070 -4.6 -1.1 hypothetical protein compare
BWI76_RS09910 -4.5 -17.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS11965 -4.5 -3.7 orotidine-5'-phosphate decarboxylase compare
BWI76_RS17980 -4.4 -4.8 RNA chaperone ProQ compare
BWI76_RS19840 -4.4 -1.0 hypothetical protein compare
BWI76_RS08385 -4.4 -3.1 citrate (Si)-synthase compare
BWI76_RS03010 -4.4 -10.1 ornithine carbamoyltransferase compare
BWI76_RS04240 -4.4 -1.4 thr operon leader peptide compare
BWI76_RS21350 -4.4 -3.9 anti-RNA polymerase sigma factor SigE compare
BWI76_RS04670 -4.4 -13.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS18950 -4.4 -3.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS00875 -4.3 -5.4 DNA-binding transcriptional regulator FabR compare
BWI76_RS16965 -4.3 -2.0 murein lipoprotein compare
BWI76_RS00805 -4.2 -6.1 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00835 -4.2 -13.3 phosphoenolpyruvate carboxylase compare
BWI76_RS26000 -4.2 -7.6 aspartate aminotransferase family protein compare
BWI76_RS04665 -4.2 -19.7 3-isopropylmalate dehydratase small subunit compare
BWI76_RS21475 -4.1 -3.3 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS05840 -4.1 -2.6 glutamate 5-kinase compare
BWI76_RS05015 -4.1 -1.9 transcriptional regulator compare
BWI76_RS11860 -4.1 -10.1 anthranilate synthase component I compare
BWI76_RS11845 -4.0 -1.5 tryptophan synthase subunit beta compare
BWI76_RS08520 -4.0 -1.6 colicin transporter TolQ compare
BWI76_RS26395 -4.0 -4.1 cell division protein FtsE compare
BWI76_RS20390 -3.9 -3.1 erythronate-4-phosphate dehydrogenase compare
BWI76_RS01115 -3.9 -2.7 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS02780 -3.9 -14.7 translocation and assembly module TamB compare
BWI76_RS09335 -3.8 -0.9 baseplate assembly protein W compare
BWI76_RS01655 -3.8 -10.3 homoserine O-succinyltransferase compare
BWI76_RS18925 -3.8 -3.6 histidinol dehydrogenase compare
BWI76_RS23365 -3.7 -3.8 LysR family transcriptional regulator compare
BWI76_RS22765 -3.7 -11.2 sulfite reductase subunit alpha compare
BWI76_RS08535 -3.7 -1.5 translocation protein TolB compare
BWI76_RS21070 -3.7 -1.5 outer membrane protein assembly factor BamB compare
BWI76_RS09760 -3.7 -2.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS09645 -3.6 -0.9 thioredoxin-disulfide reductase compare
BWI76_RS00990 -3.6 -9.4 ketol-acid reductoisomerase compare
BWI76_RS20750 -3.6 -0.8 carboxysome structural protein EutK compare
BWI76_RS24285 -3.6 -8.9 cystathionine beta-lyase compare
BWI76_RS21465 -3.6 -5.5 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04305 -3.5 -1.2 molecular chaperone DnaJ compare
BWI76_RS04525 -3.5 -1.4 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS25335 -3.5 -1.4 stringent starvation protein A compare
BWI76_RS00980 -3.5 -11.1 PLP-dependent threonine dehydratase compare
BWI76_RS22755 -3.5 -3.2 phosphoadenosine phosphosulfate reductase compare
BWI76_RS26390 -3.5 -8.2 cell division protein FtsX compare
BWI76_RS19845 -3.4 -5.6 phosphatase compare
BWI76_RS04680 -3.4 -11.6 2-isopropylmalate synthase compare
BWI76_RS24340 -3.4 -5.9 two-component sensor histidine kinase compare
BWI76_RS26665 -3.3 -2.3 DNA-binding response regulator compare
BWI76_RS25645 -3.3 -7.0 shikimate dehydrogenase compare
BWI76_RS11855 -3.3 -5.6 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS17975 -3.3 -4.9 tail-specific protease compare
BWI76_RS08530 -3.3 -1.1 protein TolA compare
BWI76_RS09755 -3.3 -2.1 phosphoserine transaminase compare
BWI76_RS05835 -3.2 -1.5 gamma-glutamyl-phosphate reductase compare
BWI76_RS08525 -3.2 -2.3 colicin transporter compare
BWI76_RS09625 -3.2 -1.0 hypothetical protein compare
BWI76_RS08580 -3.1 -3.7 quinolinate synthetase compare
BWI76_RS19495 -3.1 -1.0 ABC transporter, quaternary amine uptake transporter (QAT) family, ATP-binding protein compare
BWI76_RS06535 -3.1 -2.0 endopeptidase La compare
BWI76_RS10990 -3.1 -2.4 dihydroorotase compare
BWI76_RS04160 -3.0 -3.0 phosphoserine phosphatase compare
BWI76_RS04685 -3.0 -8.2 putative leucine operon leader peptide compare
BWI76_RS05260 -3.0 -1.0 chaperone compare
BWI76_RS22760 -3.0 -6.6 sulfite reductase subunit beta compare
BWI76_RS21075 -3.0 -1.2 membrane protein compare
BWI76_RS19685 -3.0 -4.6 lysine transporter compare
BWI76_RS01110 -3.0 -5.0 TDP-fucosamine acetyltransferase compare
BWI76_RS12145 -2.9 -1.8 hypothetical protein compare
BWI76_RS24580 -2.9 -4.4 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS24605 -2.9 -4.7 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS01800 -2.8 -1.7 glucose-6-phosphate isomerase compare
BWI76_RS21345 -2.8 -2.4 sigma-E factor regulatory protein RseB compare
BWI76_RS26730 -2.8 -8.7 inner membrane protein YhjD compare
BWI76_RS23360 -2.7 -1.2 diaminopimelate decarboxylase compare
BWI76_RS15350 -2.7 -0.9 hypothetical protein compare
BWI76_RS01220 -2.7 -5.7 DNA-dependent helicase II compare
BWI76_RS23920 -2.6 -1.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS09970 -2.6 -0.8 porin OmpA compare
BWI76_RS00965 -2.5 -0.8 acetolactate synthase 2 small subunit compare
BWI76_RS00960 -2.5 -5.2 acetolactate synthase 2 catalytic subunit compare
BWI76_RS06525 -2.4 -3.0 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS01210 -2.4 -1.0 tyrosine recombinase XerC compare
BWI76_RS21565 -2.4 -0.8 outer membrane protein assembly factor BamE compare
BWI76_RS01275 -2.4 -8.3 LysR family transcriptional regulator compare
BWI76_RS04845 -2.4 -5.4 nicotinate-nucleotide pyrophosphorylase compare
BWI76_RS08210 -2.4 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS00345 -2.4 -4.2 protein disulfide oxidoreductase DsbA compare
BWI76_RS08495 -2.4 -4.3 cytochrome bd-I ubiquinol oxidase subunit I compare
BWI76_RS21360 -2.4 -7.0 L-aspartate oxidase compare
BWI76_RS26670 -2.4 -6.9 two-component sensor histidine kinase compare
BWI76_RS21450 -2.3 -1.5 23S rRNA pseudouridine(1911/1915/1917) synthase compare
BWI76_RS24900 -2.3 -1.1 DeoR family transcriptional regulator compare
BWI76_RS01325 -2.3 -3.2 twin-arginine translocase subunit TatB compare
BWI76_RS12670 -2.3 -1.6 DNA polymerase V subunit UmuD compare
BWI76_RS10935 -2.3 -4.4 glucan biosynthesis glucosyltransferase H compare
BWI76_RS12090 -2.3 -1.2 HNH endonuclease compare
BWI76_RS00720 -2.2 -1.7 DNA-binding response regulator compare
BWI76_RS05450 -2.2 -0.7 ribonuclease HI compare
BWI76_RS27440 -2.2 -1.5 DNA helicase RecG compare
BWI76_RS09640 -2.2 -1.7 cysteine/glutathione ABC transporter permease/ATP-binding protein CydD compare
BWI76_RS06680 -2.2 -1.1 hypothetical protein compare
BWI76_RS16200 -2.2 -1.5 NAD(P) transhydrogenase subunit beta compare
BWI76_RS09655 -2.2 -4.7 leucine-responsive regulatory protein compare
BWI76_RS24740 -2.2 -2.5 GntR family transcriptional regulator compare
BWI76_RS04645 -2.2 -2.7 3-dehydroquinase compare
BWI76_RS08275 -2.2 -1.6 LexA regulated protein compare
BWI76_RS00400 -2.2 -0.8 glutamine synthetase compare
BWI76_RS20380 -2.1 -0.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS24595 -2.1 -2.4 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS25280 -2.1 -1.0 RNase adaptor protein RapZ compare
BWI76_RS02735 -2.1 -2.3 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS15360 -2.1 -2.6 hypothetical protein compare
BWI76_RS01125 -2.1 -5.1 4-alpha-L-fucosyltransferase compare
BWI76_RS12265 -2.0 -6.2 hypothetical protein compare
BWI76_RS10475 -2.0 -4.7 binding-protein-dependent transport system inner membrane protein compare
BWI76_RS16425 -2.0 -2.8 hypothetical protein compare
BWI76_RS20440 -2.0 -2.2 50S ribosomal protein L3 N(5)-glutamine methyltransferase compare
BWI76_RS23985 -2.0 -4.2 erythrose-4-phosphate dehydrogenase compare
BWI76_RS01385 -1.9 -1.8 potassium transporter compare
BWI76_RS22690 -1.9 -1.7 adenylyl-sulfate kinase compare
BWI76_RS17720 -1.9 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS11300 -1.9 -0.7 cupin compare
BWI76_RS27235 -1.9 -9.0 murein hydrolase activator EnvC compare
BWI76_RS10745 -1.8 -0.8 hypothetical protein compare
BWI76_RS15110 -1.8 -3.6 putative excinuclease ABC subunit A compare
BWI76_RS23970 -1.8 -2.4 mechanosensitive ion channel protein MscS compare
BWI76_RS16355 -1.8 -2.1 electron transport complex subunit A compare
BWI76_RS12495 -1.8 -0.8 2-Cys peroxiredoxin compare
BWI76_RS00355 -1.8 -1.5 DNA polymerase I compare
BWI76_RS01080 -1.7 -6.8 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS15825 -1.7 -0.7 hypothetical protein compare
BWI76_RS26620 -1.7 -0.5 Fe-S biogenesis protein NfuA compare
BWI76_RS19905 -1.7 -2.6 OmpK36 porin compare
BWI76_RS01900 -1.7 -3.5 tRNA-dihydrouridine synthase A compare
BWI76_RS08500 -1.7 -1.4 cytochrome d ubiquinol oxidase subunit 2 compare
BWI76_RS12270 -1.7 -2.4 hypothetical protein compare
BWI76_RS04990 -1.7 -5.2 pantoate--beta-alanine ligase compare
BWI76_RS15000 -1.7 -2.9 amino acid ABC transporter ATP-binding protein compare
BWI76_RS16935 -1.7 -1.1 shikimate dehydrogenase compare
BWI76_RS15965 -1.7 -2.8 MFS transporter compare
BWI76_RS03660 -1.7 -2.8 hypothetical protein compare
BWI76_RS08605 -1.6 -1.3 phosphoglyceromutase compare
BWI76_RS12340 -1.6 -2.6 molecular chaperone Tir compare
BWI76_RS10305 -1.6 -5.5 transposase compare
BWI76_RS26095 -1.6 -0.5 shikimate kinase compare
BWI76_RS22805 -1.6 -4.9 GTP diphosphokinase compare
BWI76_RS21370 -1.6 -0.7 ATP-dependent RNA helicase SrmB compare
BWI76_RS13820 -1.6 -1.2 hypothetical protein compare
BWI76_RS10480 -1.6 -5.6 amino acid ABC transporter substrate-binding protein compare
BWI76_RS24400 -1.6 -3.0 outer membrane channel protein TolC compare
BWI76_RS00600 -1.6 -3.8 LacI family transcriptional regulator compare
BWI76_RS24290 -1.6 -2.4 membrane protein compare
BWI76_RS07185 -1.6 -0.8 hypothetical protein compare
BWI76_RS06530 -1.6 -3.7 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS02550 -1.5 -4.8 protease modulator HflC compare
BWI76_RS14320 -1.5 -1.4 hypothetical protein compare
BWI76_RS21580 -1.5 -0.6 SsrA-binding protein compare
BWI76_RS15740 -1.5 -2.8 HNH endonuclease compare
BWI76_RS20900 -1.5 -0.9 outer membrane protein assembly factor BamC compare
BWI76_RS13920 -1.5 -4.8 magnesium-translocating P-type ATPase compare


Specific Phenotypes

For 4 genes in this experiment

For stress Vancomycin Hydrochloride Hydrate in Klebsiella michiganensis M5al

For stress Vancomycin Hydrochloride Hydrate across organisms