Experiment set13IT009 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

200 most important genes:

  gene name fitness t score description  
BWI76_RS18930 -8.7 -4.0 histidinol-phosphate transaminase compare
BWI76_RS18950 -7.6 -3.9 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS20350 -7.4 -7.5 amidophosphoribosyltransferase compare
BWI76_RS20355 -7.0 -3.2 colicin V production protein compare
BWI76_RS18955 -6.9 -4.0 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS18935 -6.7 -7.4 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS00845 -6.6 -7.8 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS00850 -6.4 -11.4 acetylglutamate kinase compare
BWI76_RS01615 -6.4 -7.6 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS04250 -6.2 -8.1 homoserine kinase compare
BWI76_RS21265 -6.1 -15.9 phosphoribosylformylglycinamidine synthase compare
BWI76_RS00855 -5.9 -8.9 argininosuccinate lyase compare
BWI76_RS04245 -5.9 -15.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS18920 -5.8 -3.1 ATP phosphoribosyltransferase compare
BWI76_RS18940 -5.7 -4.9 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS23365 -5.7 -2.8 LysR family transcriptional regulator compare
BWI76_RS20965 -5.7 -4.2 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS26460 -5.7 -3.9 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS00975 -5.7 -11.2 dihydroxy-acid dehydratase compare
BWI76_RS01610 -5.6 -6.0 phosphoribosylamine--glycine ligase compare
BWI76_RS04255 -5.6 -11.4 threonine synthase compare
BWI76_RS00805 -5.6 -5.4 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS00990 -5.6 -9.3 ketol-acid reductoisomerase compare
BWI76_RS20895 -5.6 -3.9 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS25115 -5.5 -10.1 argininosuccinate synthase compare
BWI76_RS04465 -5.5 -6.1 carbamoyl-phosphate synthase small subunit compare
BWI76_RS11850 -5.4 -9.3 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS00875 -5.3 -3.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS18925 -5.2 -6.3 histidinol dehydrogenase compare
BWI76_RS07065 -5.1 -6.8 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS00835 -5.0 -16.7 phosphoenolpyruvate carboxylase compare
BWI76_RS07070 -5.0 -3.1 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS11860 -4.9 -9.6 anthranilate synthase component I compare
BWI76_RS11855 -4.9 -7.4 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS23220 -4.8 -9.0 amino-acid N-acetyltransferase compare
BWI76_RS26455 -4.8 -1.8 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS22760 -4.8 -5.7 sulfite reductase subunit beta compare
BWI76_RS04665 -4.8 -17.2 3-isopropylmalate dehydratase small subunit compare
BWI76_RS04670 -4.7 -10.5 3-isopropylmalate dehydratase large subunit compare
BWI76_RS04675 -4.7 -4.9 3-isopropylmalate dehydrogenase compare
BWI76_RS21350 -4.6 -5.3 anti-RNA polymerase sigma factor SigE compare
BWI76_RS04470 -4.5 -10.1 carbamoyl phosphate synthase large subunit compare
BWI76_RS23265 -4.5 -1.7 hypothetical protein compare
BWI76_RS00980 -4.5 -10.4 PLP-dependent threonine dehydratase compare
BWI76_RS25645 -4.5 -6.1 shikimate dehydrogenase compare
BWI76_RS09760 -4.4 -2.9 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS17980 -4.4 -4.1 RNA chaperone ProQ compare
BWI76_RS24285 -4.4 -8.1 cystathionine beta-lyase compare
BWI76_RS22755 -4.3 -3.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS19840 -4.3 -1.1 hypothetical protein compare
BWI76_RS05260 -4.1 -1.1 chaperone compare
BWI76_RS11840 -4.1 -4.9 tryptophan synthase subunit alpha compare
BWI76_RS05015 -4.1 -2.2 transcriptional regulator compare
BWI76_RS04160 -4.1 -2.8 phosphoserine phosphatase compare
BWI76_RS11965 -4.1 -4.6 orotidine-5'-phosphate decarboxylase compare
BWI76_RS01655 -4.1 -9.3 homoserine O-succinyltransferase compare
BWI76_RS05840 -4.0 -2.8 glutamate 5-kinase compare
BWI76_RS04240 -4.0 -2.0 thr operon leader peptide compare
BWI76_RS08385 -4.0 -2.1 citrate (Si)-synthase compare
BWI76_RS03010 -4.0 -7.4 ornithine carbamoyltransferase compare
BWI76_RS22765 -4.0 -9.6 sulfite reductase subunit alpha compare
BWI76_RS11845 -4.0 -1.2 tryptophan synthase subunit beta compare
BWI76_RS08520 -3.9 -1.8 colicin transporter TolQ compare
BWI76_RS21475 -3.9 -3.1 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS02995 -3.8 -6.5 aspartate carbamoyltransferase compare
BWI76_RS00965 -3.7 -1.0 acetolactate synthase 2 small subunit compare
BWI76_RS04685 -3.7 -8.7 putative leucine operon leader peptide compare
BWI76_RS21070 -3.6 -1.6 outer membrane protein assembly factor BamB compare
BWI76_RS00345 -3.6 -3.5 protein disulfide oxidoreductase DsbA compare
BWI76_RS04680 -3.6 -11.4 2-isopropylmalate synthase compare
BWI76_RS04645 -3.6 -2.4 3-dehydroquinase compare
BWI76_RS08525 -3.6 -2.3 colicin transporter compare
BWI76_RS16965 -3.6 -2.2 murein lipoprotein compare
BWI76_RS09645 -3.6 -0.9 thioredoxin-disulfide reductase compare
BWI76_RS25335 -3.5 -1.5 stringent starvation protein A compare
BWI76_RS21565 -3.5 -0.9 outer membrane protein assembly factor BamE compare
BWI76_RS00785 -3.5 -5.9 cystathionine gamma-synthase compare
BWI76_RS27385 -3.4 -9.6 orotate phosphoribosyltransferase compare
BWI76_RS17975 -3.4 -5.1 tail-specific protease compare
BWI76_RS14320 -3.4 -2.0 hypothetical protein compare
BWI76_RS11520 -3.4 -1.3 hypothetical protein compare
BWI76_RS09910 -3.4 -14.5 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS26000 -3.4 -10.4 aspartate aminotransferase family protein compare
BWI76_RS21345 -3.4 -2.6 sigma-E factor regulatory protein RseB compare
BWI76_RS21465 -3.4 -4.1 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS01095 -3.3 -2.3 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS08605 -3.3 -2.0 phosphoglyceromutase compare
BWI76_RS05835 -3.2 -1.7 gamma-glutamyl-phosphate reductase compare
BWI76_RS19905 -3.1 -4.6 OmpK36 porin compare
BWI76_RS24600 -3.1 -2.1 dihydroxyacetone kinase compare
BWI76_RS23920 -3.1 -1.8 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS26570 -3.1 -2.1 anion permease compare
BWI76_RS16490 -3.1 -1.4 glutaredoxin compare
BWI76_RS27425 -3.0 -1.3 DNA-directed RNA polymerase subunit omega compare
BWI76_RS19770 -3.0 -1.1 bifunctional murein DD-endopeptidase/murein LD-carboxypeptidase compare
BWI76_RS17290 -3.0 -6.6 formyltetrahydrofolate deformylase compare
BWI76_RS02735 -3.0 -3.4 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS09755 -3.0 -2.9 phosphoserine transaminase compare
BWI76_RS01115 -2.9 -2.9 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS00985 -2.8 -6.4 transcriptional regulator IlvY compare
BWI76_RS20360 -2.8 -0.7 cell division protein DedD compare
BWI76_RS24605 -2.8 -4.6 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS27390 -2.7 -6.3 ribonuclease PH compare
BWI76_RS23360 -2.7 -1.4 diaminopimelate decarboxylase compare
BWI76_RS06535 -2.7 -2.5 endopeptidase La compare
BWI76_RS04715 -2.6 -2.1 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS01800 -2.6 -2.5 glucose-6-phosphate isomerase compare
BWI76_RS26665 -2.6 -2.6 DNA-binding response regulator compare
BWI76_RS01110 -2.6 -3.4 TDP-fucosamine acetyltransferase compare
BWI76_RS01080 -2.5 -6.6 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09970 -2.5 -0.8 porin OmpA compare
BWI76_RS11635 -2.5 -1.3 ABC transporter compare
BWI76_RS01275 -2.5 -4.7 LysR family transcriptional regulator compare
BWI76_RS01210 -2.5 -1.1 tyrosine recombinase XerC compare
BWI76_RS01135 -2.5 -4.5 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS09615 -2.5 -2.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
BWI76_RS08530 -2.4 -1.2 protein TolA compare
BWI76_RS15760 -2.4 -1.7 hypothetical protein compare
BWI76_RS08535 -2.4 -1.5 translocation protein TolB compare
BWI76_RS26055 -2.4 -7.2 siroheme synthase compare
BWI76_RS07465 -2.4 -0.8 TetR family transcriptional regulator compare
BWI76_RS10990 -2.4 -1.5 dihydroorotase compare
BWI76_RS08210 -2.4 -0.9 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS24400 -2.3 -2.3 outer membrane channel protein TolC compare
BWI76_RS24900 -2.3 -1.2 DeoR family transcriptional regulator compare
BWI76_RS25920 -2.3 -1.4 peptidylprolyl isomerase compare
BWI76_RS24580 -2.2 -5.2 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS00960 -2.2 -4.7 acetolactate synthase 2 catalytic subunit compare
BWI76_RS26730 -2.2 -7.3 inner membrane protein YhjD compare
BWI76_RS20640 -2.2 -3.8 cysteine synthase A compare
BWI76_RS26670 -2.2 -7.7 two-component sensor histidine kinase compare
BWI76_RS00400 -2.2 -1.0 glutamine synthetase compare
BWI76_RS21810 -2.2 -1.4 universal stress protein compare
BWI76_RS17805 -2.2 -1.4 membrane protein compare
BWI76_RS19375 -2.2 -1.4 bifunctional hydroxymethylpyrimidine kinase/phosphomethylpyrimidine kinase compare
BWI76_RS09655 -2.1 -4.0 leucine-responsive regulatory protein compare
BWI76_RS21100 -2.1 -1.8 nucleoside-diphosphate kinase compare
BWI76_RS05120 -2.0 -6.4 bifunctional glycosyl transferase/transpeptidase compare
BWI76_RS01125 -2.0 -5.2 4-alpha-L-fucosyltransferase compare
BWI76_RS11105 -2.0 -2.2 aminodeoxychorismate lyase compare
BWI76_RS14390 -2.0 -1.2 hypothetical protein compare
BWI76_RS26150 -2.0 -2.0 molecular chaperone Hsp33 compare
BWI76_RS00240 -2.0 -1.0 FMN-binding protein MioC compare
BWI76_RS27440 -2.0 -1.9 DNA helicase RecG compare
BWI76_RS06680 -2.0 -1.1 hypothetical protein compare
BWI76_RS27165 -2.0 -4.4 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS09960 -2.0 -2.6 Lon protease compare
BWI76_RS04525 -1.9 -1.2 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS20380 -1.9 -0.7 tRNA pseudouridine(38-40) synthase TruA compare
BWI76_RS04100 -1.9 -2.9 peptide chain release factor 3 compare
BWI76_RS20390 -1.9 -3.6 erythronate-4-phosphate dehydrogenase compare
BWI76_RS05075 -1.9 -0.5 type II secretion system protein GspG compare
BWI76_RS26005 -1.9 -2.9 glutamine amidotransferase compare
BWI76_RS15215 -1.9 -1.0 N-acetyltransferase compare
BWI76_RS15110 -1.9 -2.3 putative excinuclease ABC subunit A compare
BWI76_RS15350 -1.9 -0.8 hypothetical protein compare
BWI76_RS19330 -1.9 -0.8 HAD family hydrolase compare
BWI76_RS17720 -1.9 -0.5 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS19685 -1.9 -3.6 lysine transporter compare
BWI76_RS22420 -1.9 -2.1 LacI family transcriptional regulator compare
BWI76_RS21375 -1.8 -0.7 autonomous glycyl radical cofactor GrcA compare
BWI76_RS12985 -1.8 -1.5 transcriptional regulator compare
BWI76_RS17195 -1.8 -1.8 hypothetical protein compare
BWI76_RS01775 -1.8 -1.3 hypothetical protein compare
BWI76_RS13595 -1.8 -3.6 transcriptional regulator compare
BWI76_RS24595 -1.8 -2.4 dihydroxyacetone kinase subunit DhaK compare
BWI76_RS13915 -1.7 -6.9 magnesium transport protein MgtC compare
BWI76_RS01350 -1.7 -0.6 NAD(P)H-flavin reductase compare
BWI76_RS21660 -1.7 -1.4 antirestriction protein compare
BWI76_RS12340 -1.7 -2.6 molecular chaperone Tir compare
BWI76_RS13920 -1.7 -5.6 magnesium-translocating P-type ATPase compare
BWI76_RS12090 -1.7 -1.1 HNH endonuclease compare
BWI76_RS02530 -1.7 -0.9 tRNA dimethylallyltransferase compare
BWI76_RS17865 -1.7 -6.5 aminodeoxychorismate synthase subunit I compare
BWI76_RS11900 -1.7 -0.8 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
BWI76_RS19670 -1.7 -2.1 S-formylglutathione hydrolase compare
BWI76_RS26390 -1.6 -4.5 cell division protein FtsX compare
BWI76_RS22700 -1.6 -3.1 sulfate adenylyltransferase subunit 2 compare
BWI76_RS12265 -1.6 -4.4 hypothetical protein compare
BWI76_RS15635 -1.6 -2.4 hypothetical protein compare
BWI76_RS14375 -1.6 -2.2 hypothetical protein compare
BWI76_RS23805 -1.6 -4.5 ssDNA exonuclease RecJ compare
BWI76_RS00390 -1.6 -3.3 two-component system sensor histidine kinase NtrB compare
BWI76_RS22690 -1.6 -1.5 adenylyl-sulfate kinase compare
BWI76_RS16920 -1.6 -0.9 3-(2,3-dihydroxyphenyl)propionate dioxygenase compare
BWI76_RS15740 -1.6 -2.6 HNH endonuclease compare
BWI76_RS01870 -1.6 -2.9 diacylglycerol kinase compare
BWI76_RS06525 -1.6 -2.7 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS24765 -1.6 -2.8 membrane protein compare
BWI76_RS00715 -1.6 -1.1 two-component sensor histidine kinase compare
BWI76_RS02725 -1.5 -0.9 HxlR family transcriptional regulator compare
BWI76_RS12205 -1.5 -2.9 hypothetical protein compare
BWI76_RS07185 -1.5 -0.9 hypothetical protein compare
BWI76_RS09650 -1.5 -3.9 hypothetical protein compare
BWI76_RS01630 -1.5 -0.8 16S ribosomal RNA compare
BWI76_RS05680 -1.5 -2.9 LacI family transcriptional regulator compare
BWI76_RS12400 -1.5 -4.3 TetR family transcriptional regulator compare
BWI76_RS08975 -1.5 -3.5 amino acid ABC transporter substrate-binding protein compare
BWI76_RS14065 -1.5 -1.2 hypothetical protein compare
BWI76_RS18000 -1.5 -2.8 16S rRNA (cytosine(1407)-C(5))-methyltransferase RsmF compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum T22 grown in Fungal_growth_media_mCAFEs_v1, filtered and pH-adjusted across organisms