Experiment set13IT008 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x and biotin 0.32 ug/ml

200 most important genes:

  gene name fitness t score description  
BWI76_RS17980 -5.6 -3.1 RNA chaperone ProQ compare
BWI76_RS18950 -5.4 -3.5 imidazole glycerol phosphate synthase cyclase subunit compare
BWI76_RS21350 -5.4 -4.3 anti-RNA polymerase sigma factor SigE compare
BWI76_RS18935 -5.2 -9.0 bifunctional imidazole glycerol-phosphate dehydratase/histidinol phosphatase compare
BWI76_RS18940 -5.0 -5.6 imidazole glycerol phosphate synthase subunit HisH compare
BWI76_RS26460 -4.9 -4.1 4-amino-4-deoxy-L-arabinose-phosphoundecaprenol flippase subunit ArnE compare
BWI76_RS00845 -4.9 -13.0 N-acetyl-gamma-glutamyl-phosphate reductase compare
BWI76_RS04250 -4.8 -8.3 homoserine kinase compare
BWI76_RS26455 -4.8 -1.6 4-amino-4-deoxy-L-arabinose-phospho-UDP flippase compare
BWI76_RS00850 -4.8 -12.7 acetylglutamate kinase compare
BWI76_RS23220 -4.7 -9.3 amino-acid N-acetyltransferase compare
BWI76_RS04305 -4.7 -1.1 molecular chaperone DnaJ compare
BWI76_RS01115 -4.6 -2.5 dTDP-4-amino-4,6-dideoxygalactose transaminase compare
BWI76_RS23365 -4.5 -2.7 LysR family transcriptional regulator compare
BWI76_RS00990 -4.5 -9.9 ketol-acid reductoisomerase compare
BWI76_RS00835 -4.5 -15.5 phosphoenolpyruvate carboxylase compare
BWI76_RS23265 -4.5 -1.5 hypothetical protein compare
BWI76_RS00975 -4.5 -10.1 dihydroxy-acid dehydratase compare
BWI76_RS04465 -4.5 -4.7 carbamoyl-phosphate synthase small subunit compare
BWI76_RS20355 -4.4 -3.2 colicin V production protein compare
BWI76_RS04255 -4.3 -11.0 threonine synthase compare
BWI76_RS04245 -4.3 -17.1 bifunctional aspartate kinase/homoserine dehydrogenase I compare
BWI76_RS26000 -4.3 -7.2 aspartate aminotransferase family protein compare
BWI76_RS19840 -4.3 -1.0 hypothetical protein compare
BWI76_RS07070 -4.2 -4.0 5-(carboxyamino)imidazole ribonucleotide mutase compare
BWI76_RS00980 -4.2 -11.3 PLP-dependent threonine dehydratase compare
BWI76_RS08525 -4.1 -1.6 colicin transporter compare
BWI76_RS20350 -4.1 -9.3 amidophosphoribosyltransferase compare
BWI76_RS16965 -4.0 -1.8 murein lipoprotein compare
BWI76_RS00855 -4.0 -10.2 argininosuccinate lyase compare
BWI76_RS05015 -4.0 -1.8 transcriptional regulator compare
BWI76_RS05840 -4.0 -2.4 glutamate 5-kinase compare
BWI76_RS04675 -3.9 -5.9 3-isopropylmalate dehydrogenase compare
BWI76_RS03010 -3.9 -11.6 ornithine carbamoyltransferase compare
BWI76_RS08520 -3.9 -1.5 colicin transporter TolQ compare
BWI76_RS18930 -3.8 -3.5 histidinol-phosphate transaminase compare
BWI76_RS17975 -3.8 -4.2 tail-specific protease compare
BWI76_RS00785 -3.8 -7.8 cystathionine gamma-synthase compare
BWI76_RS21475 -3.8 -2.7 bifunctional chorismate mutase/prephenate dehydrogenase compare
BWI76_RS18955 -3.8 -3.7 bifunctional phosphoribosyl-AMP cyclohydrolase/phosphoribosyl-ATP diphosphatase compare
BWI76_RS09760 -3.8 -2.7 3-phosphoshikimate 1-carboxyvinyltransferase compare
BWI76_RS20895 -3.7 -5.4 phosphoribosylaminoimidazolesuccinocarboxamide synthase compare
BWI76_RS27385 -3.7 -9.6 orotate phosphoribosyltransferase compare
BWI76_RS18920 -3.7 -3.3 ATP phosphoribosyltransferase compare
BWI76_RS04715 -3.7 -1.7 division/cell wall cluster transcriptional repressor MraZ compare
BWI76_RS00965 -3.7 -0.9 acetolactate synthase 2 small subunit compare
BWI76_RS21465 -3.7 -5.0 bifunctional chorismate mutase/prephenate dehydratase compare
BWI76_RS04470 -3.7 -10.2 carbamoyl phosphate synthase large subunit compare
BWI76_RS25645 -3.7 -6.7 shikimate dehydrogenase compare
BWI76_RS04670 -3.7 -11.8 3-isopropylmalate dehydratase large subunit compare
BWI76_RS08385 -3.7 -2.3 citrate (Si)-synthase compare
BWI76_RS11840 -3.6 -4.6 tryptophan synthase subunit alpha compare
BWI76_RS08535 -3.6 -1.4 translocation protein TolB compare
BWI76_RS04160 -3.6 -2.9 phosphoserine phosphatase compare
BWI76_RS18925 -3.6 -6.1 histidinol dehydrogenase compare
BWI76_RS22765 -3.6 -9.9 sulfite reductase subunit alpha compare
BWI76_RS04665 -3.5 -18.8 3-isopropylmalate dehydratase small subunit compare
BWI76_RS01615 -3.5 -12.3 bifunctional phosphoribosylaminoimidazolecarboxamide formyltransferase/inosine monophosphate cyclohydrolase compare
BWI76_RS09645 -3.5 -0.8 thioredoxin-disulfide reductase compare
BWI76_RS25115 -3.5 -9.0 argininosuccinate synthase compare
BWI76_RS11845 -3.5 -1.9 tryptophan synthase subunit beta compare
BWI76_RS25335 -3.4 -1.3 stringent starvation protein A compare
BWI76_RS21265 -3.4 -13.1 phosphoribosylformylglycinamidine synthase compare
BWI76_RS01655 -3.3 -9.1 homoserine O-succinyltransferase compare
BWI76_RS21310 -3.3 -0.7 DNA repair protein RecO compare
BWI76_RS24285 -3.3 -8.3 cystathionine beta-lyase compare
BWI76_RS01610 -3.2 -7.4 phosphoribosylamine--glycine ligase compare
BWI76_RS01275 -3.2 -7.8 LysR family transcriptional regulator compare
BWI76_RS02735 -3.2 -2.9 3'(2'),5'-bisphosphate nucleotidase CysQ compare
BWI76_RS13545 -3.1 -1.0 N-acetyltransferase compare
BWI76_RS07065 -3.1 -7.7 5-(carboxyamino)imidazole ribonucleotide synthase compare
BWI76_RS05835 -3.1 -1.4 gamma-glutamyl-phosphate reductase compare
BWI76_RS09755 -3.1 -2.0 phosphoserine transaminase compare
BWI76_RS04685 -3.0 -7.4 putative leucine operon leader peptide compare
BWI76_RS00805 -3.0 -3.9 5,10-methylenetetrahydrofolate reductase compare
BWI76_RS23920 -3.0 -1.5 D-3-phosphoglycerate dehydrogenase compare
BWI76_RS27425 -3.0 -1.1 DNA-directed RNA polymerase subunit omega compare
BWI76_RS22760 -3.0 -6.2 sulfite reductase subunit beta compare
BWI76_RS11860 -2.9 -8.7 anthranilate synthase component I compare
BWI76_RS06535 -2.9 -1.9 endopeptidase La compare
BWI76_RS10990 -2.8 -2.2 dihydroorotase compare
BWI76_RS11850 -2.8 -7.2 bifunctional indole-3-glycerol phosphate synthase/phosphoribosylanthranilate isomerase compare
BWI76_RS05260 -2.8 -0.9 chaperone compare
BWI76_RS04645 -2.8 -3.2 3-dehydroquinase compare
BWI76_RS01800 -2.8 -1.7 glucose-6-phosphate isomerase compare
BWI76_RS24605 -2.7 -4.8 dihydroxyacetone kinase subunit DhaM compare
BWI76_RS22755 -2.7 -3.0 phosphoadenosine phosphosulfate reductase compare
BWI76_RS11965 -2.7 -4.2 orotidine-5'-phosphate decarboxylase compare
BWI76_RS04680 -2.7 -10.0 2-isopropylmalate synthase compare
BWI76_RS20965 -2.7 -3.9 phosphoribosylformylglycinamidine cyclo-ligase compare
BWI76_RS25960 -2.7 -3.1 NUDIX hydrolase compare
BWI76_RS12495 -2.6 -0.9 2-Cys peroxiredoxin compare
BWI76_RS23360 -2.6 -1.2 diaminopimelate decarboxylase compare
BWI76_RS11835 -2.6 -1.7 putative regulatory protein MarR compare
BWI76_RS00875 -2.5 -4.7 DNA-binding transcriptional regulator FabR compare
BWI76_RS09910 -2.5 -11.8 dihydroorotate dehydrogenase (quinone) compare
BWI76_RS24580 -2.5 -3.8 PTS-dependent dihydroxyacetone kinase operon transcriptional regulator DhaR compare
BWI76_RS26395 -2.5 -4.3 cell division protein FtsE compare
BWI76_RS09970 -2.5 -0.7 porin OmpA compare
BWI76_RS26390 -2.5 -7.0 cell division protein FtsX compare
BWI76_RS25920 -2.5 -1.3 peptidylprolyl isomerase compare
BWI76_RS20230 -2.4 -1.0 hypothetical protein compare
BWI76_RS11855 -2.4 -7.2 bifunctional glutamine amidotransferase/anthranilate phosphoribosyltransferase compare
BWI76_RS20880 -2.4 -1.7 esterase compare
BWI76_RS01210 -2.4 -0.9 tyrosine recombinase XerC compare
BWI76_RS15825 -2.4 -0.8 hypothetical protein compare
BWI76_RS08210 -2.4 -0.8 N-acetylglucosamine-6-phosphate deacetylase compare
BWI76_RS26670 -2.4 -6.9 two-component sensor histidine kinase compare
BWI76_RS27390 -2.4 -4.8 ribonuclease PH compare
BWI76_RS01080 -2.3 -5.7 undecaprenyl-phosphate alpha-N-acetylglucosaminyl 1-phosphate transferase compare
BWI76_RS09195 -2.3 -1.0 N-acetyltransferase compare
BWI76_RS01135 -2.3 -3.8 lipopolysaccharide N-acetylmannosaminouronosyltransferase compare
BWI76_RS00960 -2.3 -5.1 acetolactate synthase 2 catalytic subunit compare
BWI76_RS24900 -2.2 -1.0 DeoR family transcriptional regulator compare
BWI76_RS12145 -2.2 -1.7 hypothetical protein compare
BWI76_RS12225 -2.2 -2.4 hypothetical protein compare
BWI76_RS04240 -2.2 -2.3 thr operon leader peptide compare
BWI76_RS27440 -2.2 -1.5 DNA helicase RecG compare
BWI76_RS05450 -2.2 -0.6 ribonuclease HI compare
BWI76_RS13920 -2.1 -6.5 magnesium-translocating P-type ATPase compare
BWI76_RS00400 -2.1 -0.8 glutamine synthetase compare
BWI76_RS24885 -2.1 -0.8 PTS galactitol transporter subunit IIB compare
BWI76_RS24400 -2.1 -2.8 outer membrane channel protein TolC compare
BWI76_RS17675 -2.1 -1.5 hypothetical protein compare
BWI76_RS13315 -2.0 -1.4 50S ribosomal protein L7/L12-serine acetyltransferase compare
BWI76_RS23480 -2.0 -14.5 EAL domain-containing protein compare
BWI76_RS01125 -2.0 -4.3 4-alpha-L-fucosyltransferase compare
BWI76_RS22950 -2.0 -1.6 membrane protein compare
BWI76_RS10745 -2.0 -0.8 hypothetical protein compare
BWI76_RS26665 -2.0 -1.6 DNA-binding response regulator compare
BWI76_RS21660 -2.0 -1.2 antirestriction protein compare
BWI76_RS21370 -2.0 -0.6 ATP-dependent RNA helicase SrmB compare
BWI76_RS16425 -2.0 -1.7 hypothetical protein compare
BWI76_RS20900 -2.0 -0.9 outer membrane protein assembly factor BamC compare
BWI76_RS07465 -1.9 -0.8 TetR family transcriptional regulator compare
BWI76_RS27310 -1.9 -12.5 glycosyltransferase compare
BWI76_RS11520 -1.9 -1.0 hypothetical protein compare
BWI76_RS00240 -1.9 -0.9 FMN-binding protein MioC compare
BWI76_RS05880 -1.9 -1.5 AraC-type DNA-binding domain-containing protein compare
BWI76_RS08530 -1.9 -1.0 protein TolA compare
BWI76_RS11440 -1.9 -0.8 hypothetical protein compare
BWI76_RS21070 -1.9 -1.0 outer membrane protein assembly factor BamB compare
BWI76_RS04525 -1.9 -1.0 4-hydroxythreonine-4-phosphate dehydrogenase PdxA compare
BWI76_RS17805 -1.9 -1.1 membrane protein compare
BWI76_RS02995 -1.9 -6.7 aspartate carbamoyltransferase compare
BWI76_RS26150 -1.9 -2.4 molecular chaperone Hsp33 compare
BWI76_RS17720 -1.8 -0.4 muramoyltetrapeptide carboxypeptidase compare
BWI76_RS13560 -1.8 -0.6 amino acid ABC transporter substrate-binding subunit compare
BWI76_RS25065 -1.8 -3.0 polyribonucleotide nucleotidyltransferase compare
BWI76_RS12265 -1.8 -3.7 hypothetical protein compare
BWI76_RS10305 -1.8 -4.8 transposase compare
BWI76_RS20150 -1.8 -1.2 NADH:ubiquinone oxidoreductase subunit J compare
BWI76_RS20640 -1.8 -2.8 cysteine synthase A compare
BWI76_RS06525 -1.8 -2.8 ATP-dependent Clp protease proteolytic subunit compare
BWI76_RS26440 -1.8 -0.7 hypothetical protein compare
BWI76_RS24075 -1.8 -2.6 glutathione synthase compare
BWI76_RS21165 -1.8 -1.0 Fe-S cluster assembly transcriptional regulator IscR compare
BWI76_RS22690 -1.8 -1.2 adenylyl-sulfate kinase compare
BWI76_RS09450 -1.7 -1.6 30S ribosomal protein S6--L-glutamate ligase compare
BWI76_RS02340 -1.7 -2.6 membrane protein FxsA compare
BWI76_RS23970 -1.7 -2.0 mechanosensitive ion channel protein MscS compare
BWI76_RS27165 -1.7 -4.0 mannitol-1-phosphate 5-dehydrogenase compare
BWI76_RS26570 -1.7 -1.4 anion permease compare
BWI76_RS14065 -1.7 -1.3 hypothetical protein compare
BWI76_RS15110 -1.7 -2.3 putative excinuclease ABC subunit A compare
BWI76_RS05070 -1.7 -1.9 type II secretion system protein GspH compare
BWI76_RS26470 -1.7 -3.3 4-deoxy-4-formamido-L-arabinose- phosphoundecaprenol deformylase compare
BWI76_RS00755 -1.7 -2.2 ATP-dependent protease subunit HslV compare
BWI76_RS14005 -1.7 -0.9 TetR family transcriptional regulator compare
BWI76_RS09190 -1.7 -1.1 hypothetical protein compare
BWI76_RS15670 -1.7 -3.5 hypothetical protein compare
BWI76_RS25070 -1.7 -0.9 hypothetical protein compare
BWI76_RS04100 -1.6 -2.1 peptide chain release factor 3 compare
BWI76_RS06530 -1.6 -2.8 ATP-dependent Clp protease ATP-binding subunit ClpX compare
BWI76_RS26620 -1.6 -0.5 Fe-S biogenesis protein NfuA compare
BWI76_RS00355 -1.6 -1.3 DNA polymerase I compare
BWI76_RS10575 -1.6 -0.9 polar amino acid ABC transporter permease compare
BWI76_RS26095 -1.6 -0.5 shikimate kinase compare
BWI76_RS02050 -1.6 -1.5 CidA/LrgA family protein compare
BWI76_RS21565 -1.6 -0.6 outer membrane protein assembly factor BamE compare
BWI76_RS24290 -1.6 -2.9 membrane protein compare
BWI76_RS12335 -1.6 -4.1 hypothetical protein compare
BWI76_RS11105 -1.6 -1.7 aminodeoxychorismate lyase compare
BWI76_RS25315 -1.5 -5.8 glutamate synthase large subunit compare
BWI76_RS19670 -1.5 -1.8 S-formylglutathione hydrolase compare
BWI76_RS26730 -1.5 -3.8 inner membrane protein YhjD compare
BWI76_RS10295 -1.5 -1.8 short chain dehydrogenase/reductase family oxidoreductase compare
BWI76_RS23820 -1.5 -3.0 flavodoxin FldB compare
BWI76_RS01095 -1.5 -0.9 UDP-N-acetyl-D-mannosamine dehydrogenase compare
BWI76_RS21345 -1.5 -1.6 sigma-E factor regulatory protein RseB compare
BWI76_RS20730 -1.5 -0.9 hypothetical protein compare
BWI76_RS02530 -1.5 -0.7 tRNA dimethylallyltransferase compare
BWI76_RS10935 -1.5 -3.2 glucan biosynthesis glucosyltransferase H compare
BWI76_RS03660 -1.5 -2.5 hypothetical protein compare
BWI76_RS08040 -1.5 -1.2 23S rRNA (pseudouridine(1915)-N(3))-methyltransferase RlmH compare
BWI76_RS18740 -1.5 -3.0 HPP family protein compare
BWI76_RS00985 -1.5 -3.9 transcriptional regulator IlvY compare
BWI76_RS12400 -1.5 -3.9 TetR family transcriptional regulator compare
BWI76_RS22475 -1.5 -1.4 heme ABC transporter ATP-binding protein compare
BWI76_RS27305 -1.5 -6.8 glycosyl transferase compare


Specific Phenotypes

For 6 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted across organisms