Experiment set13IT006 for Klebsiella michiganensis M5al

Compare to:

Fungal_growth_media_mCAFEs_v1 with Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted 0.8 x

200 most detrimental genes:

  gene name fitness t score description  
BWI76_RS11610 +2.8 2.2 glutamate dehydrogenase compare
BWI76_RS13330 +2.3 1.8 tellurite resistance methyltransferase TehB compare
BWI76_RS02815 +2.1 2.1 fructose-bisphosphatase class I compare
BWI76_RS00140 +2.0 2.4 phosphate transport system regulator PhoU compare
BWI76_RS26620 +1.9 0.9 Fe-S biogenesis protein NfuA compare
BWI76_RS11110 +1.7 1.2 cell division protein YceG compare
BWI76_RS23895 +1.7 1.7 Xaa-Pro aminopeptidase compare
BWI76_RS27455 +1.7 2.2 DUF805 domain-containing protein compare
BWI76_RS20360 +1.7 0.8 cell division protein DedD compare
BWI76_RS22650 +1.7 6.4 lipoprotein NlpD compare
BWI76_RS11700 +1.6 1.4 hypothetical protein compare
BWI76_RS11335 +1.6 1.6 tautomerase compare
BWI76_RS16480 +1.6 1.9 lactoylglutathione lyase compare
BWI76_RS17955 +1.6 2.9 hypothetical protein compare
BWI76_RS01585 +1.6 5.5 transcriptional regulator compare
BWI76_RS06205 +1.5 2.6 recombination-associated protein RdgC compare
BWI76_RS05570 +1.5 1.2 hypothetical protein compare
BWI76_RS13805 +1.5 2.7 inorganic diphosphatase compare
BWI76_RS18385 +1.5 1.5 hypothetical protein compare
BWI76_RS20995 +1.4 6.2 RNA degradosome polyphosphate kinase compare
BWI76_RS01675 +1.4 2.6 putative cytoplasmic protein compare
BWI76_RS17770 +1.4 1.3 isomerase/hydrolase compare
BWI76_RS08615 +1.4 2.5 galactokinase compare
BWI76_RS19330 +1.4 0.9 HAD family hydrolase compare
BWI76_RS11300 +1.4 0.9 cupin compare
BWI76_RS25225 +1.4 3.7 ABC transporter permease compare
BWI76_RS13955 +1.4 1.9 hypothetical protein compare
BWI76_RS15290 +1.4 0.9 transcriptional regulator compare
BWI76_RS02180 +1.4 1.7 hypothetical protein compare
BWI76_RS11675 +1.4 2.2 arginine N-succinyltransferase compare
BWI76_RS08345 +1.3 2.5 Nif3-like dinuclear metal center protein compare
BWI76_RS23505 +1.3 8.5 ferrous iron transporter B compare
BWI76_RS04560 +1.3 2.0 holo-ACP synthase CitX compare
BWI76_RS19690 +1.3 1.9 LysR family transcriptional regulator compare
BWI76_RS01285 +1.3 2.6 amino acid ABC transporter substrate-binding protein compare
BWI76_RS12735 +1.3 2.5 phage repressor protein compare
BWI76_RS12550 +1.3 1.5 hypothetical protein compare
BWI76_RS19405 +1.3 2.1 LysR family transcriptional regulator compare
BWI76_RS12825 +1.3 2.4 hypothetical protein compare
BWI76_RS21485 +1.3 4.5 DUF4154 domain-containing protein compare
BWI76_RS01995 +1.3 1.3 AraC family transcriptional regulator compare
BWI76_RS14935 +1.3 1.0 NIPSNAP family containing protein compare
BWI76_RS13095 +1.3 1.9 phenylacetate-CoA oxygenase subunit PaaB compare
BWI76_RS08395 +1.3 1.3 succinate dehydrogenase cytochrome b556 large subunit compare
BWI76_RS06400 +1.3 1.0 oxidative-stress-resistance chaperone compare
BWI76_RS23030 +1.3 2.2 cobalamin biosynthesis protein CbiM compare
BWI76_RS20465 +1.3 3.3 hypothetical protein compare
BWI76_RS07540 +1.2 3.0 dipeptide ABC transporter ATP-binding protein DppD compare
BWI76_RS13420 +1.2 1.3 ABC transporter permease compare
BWI76_RS20785 +1.2 0.9 ethanolamine utilization protein EutJ compare
BWI76_RS16000 +1.2 1.4 multidrug transporter subunit MdtI compare
BWI76_RS14870 +1.2 0.7 hypothetical protein compare
BWI76_RS13525 +1.2 2.8 putative luciferase-like monooxygenase compare
BWI76_RS02225 +1.2 1.0 phosphonate C-P lyase system protein PhnG compare
BWI76_RS19850 +1.2 1.5 tRNA-Pro compare
BWI76_RS03025 +1.1 1.4 N-acetyltransferase compare
BWI76_RS24655 +1.1 2.7 autoinducer 2 ABC transporter permease LsrC compare
BWI76_RS19870 +1.1 1.7 malate:quinone oxidoreductase compare
BWI76_RS15330 +1.1 2.0 urea ABC transporter permease subunit UrtC compare
BWI76_RS10055 +1.1 1.2 AraC family transcriptional regulator compare
BWI76_RS07255 +1.1 1.4 hypothetical protein compare
BWI76_RS00720 +1.1 1.0 DNA-binding response regulator compare
BWI76_RS07725 +1.1 1.0 iron-enterobactin transporter permease compare
BWI76_RS17615 +1.1 2.3 RNA pseudouridine synthase compare
BWI76_RS11770 +1.1 1.2 hypothetical protein compare
BWI76_RS11430 +1.1 0.8 lipoprotein compare
BWI76_RS05645 +1.1 2.1 fructuronate reductase compare
BWI76_RS11705 +1.1 2.5 hypothetical protein compare
BWI76_RS21945 +1.1 1.5 LysR family transcriptional regulator compare
BWI76_RS19615 +1.1 1.3 vancomycin high temperature exclusion protein compare
BWI76_RS21235 +1.1 0.5 hypothetical protein compare
BWI76_RS18125 +1.1 2.6 murein DD-endopeptidase MepM compare
BWI76_RS10385 +1.1 3.8 MmgE/PrpD family protein compare
BWI76_RS25000 +1.1 1.1 malonate decarboxylase acyl carrier protein compare
BWI76_RS08350 +1.1 1.6 carboxylase compare
BWI76_RS02800 +1.1 2.9 ABC transporter compare
BWI76_RS13245 +1.1 1.0 DNA-damage-inducible protein I compare
BWI76_RS25475 +1.1 4.3 TIGR02099 family protein compare
BWI76_RS11780 +1.1 1.1 2-deoxyglucose-6-phosphatase compare
BWI76_RS19360 +1.1 2.6 glucose dehydrogenase compare
BWI76_RS02820 +1.1 2.6 UDP-N-acetylmuramate:L-alanyl-gamma-D-glutamyl- meso-diaminopimelate ligase compare
BWI76_RS27940 +1.0 1.2 2-dehydro-3-deoxy-6-phosphogalactonate aldolase compare
BWI76_RS01330 +1.0 2.5 twin-arginine translocase subunit TatC compare
BWI76_RS26190 +1.0 2.4 glycerol-3-phosphate dehydrogenase compare
BWI76_RS18810 +1.0 2.2 nitrogenase iron protein compare
BWI76_RS15845 +1.0 0.6 hypothetical protein compare
BWI76_RS06335 +1.0 1.9 nucleoside-specific channel-forming protein Tsx compare
BWI76_RS16170 +1.0 2.2 amidohydrolase compare
BWI76_RS24825 +1.0 1.6 2-hydroxy-3-oxopropionate reductase compare
BWI76_RS16950 +1.0 0.9 TetR family transcriptional regulator compare
BWI76_RS26505 +1.0 1.9 nickel ABC transporter permease subunit NikB compare
BWI76_RS12390 +1.0 1.4 antibiotic biosynthesis monooxygenase compare
BWI76_RS16040 +1.0 1.1 biotin-independent malonate decarboxylase subunit gamma compare
BWI76_RS09515 +1.0 1.2 arginine ABC transporter substrate-binding protein compare
BWI76_RS13590 +1.0 1.1 hypothetical protein compare
BWI76_RS20940 +1.0 2.1 uracil/xanthine transporter compare
BWI76_RS18410 +1.0 1.8 drug/metabolite exporter YedA compare
BWI76_RS03515 +1.0 2.4 hypothetical protein compare
BWI76_RS27735 +1.0 2.1 hypothetical protein compare
BWI76_RS25915 +1.0 2.4 protein SlyX compare
BWI76_RS12680 +1.0 1.5 oxidoreductase compare
BWI76_RS05430 +1.0 1.9 UbiE/COQ5 family methyltransferase compare
BWI76_RS20340 +1.0 1.3 histidine ABC transporter substrate-binding protein HisJ compare
BWI76_RS15980 +1.0 1.6 lysine transporter LysE compare
BWI76_RS16210 +1.0 0.7 hypothetical protein compare
BWI76_RS09085 +1.0 3.1 molybdopterin molybdenumtransferase MoeA compare
BWI76_RS18725 +1.0 2.4 hypothetical protein compare
BWI76_RS02520 +1.0 3.6 N-acetylmuramoyl-L-alanine amidase compare
BWI76_RS03005 +1.0 2.9 hypothetical protein compare
BWI76_RS07350 +1.0 1.9 alcohol dehydrogenase compare
BWI76_RS14155 +1.0 1.8 transketolase compare
BWI76_RS13600 +1.0 1.5 hypothetical protein compare
BWI76_RS26435 +1.0 3.8 hypothetical protein compare
BWI76_RS01325 +1.0 1.3 twin-arginine translocase subunit TatB compare
BWI76_RS12200 +1.0 2.7 hypothetical protein compare
BWI76_RS16095 +1.0 1.3 thiamine biosynthesis protein ApbE compare
BWI76_RS12150 +0.9 2.9 DNA damage-inducible protein I compare
BWI76_RS08620 +0.9 3.3 galactose-1-phosphate uridylyltransferase compare
BWI76_RS10770 +0.9 1.7 pyrimidine utilization protein C compare
BWI76_RS03015 +0.9 1.0 RNase E inhibitor protein compare
BWI76_RS06070 +0.9 1.9 taurine transporter ATP-binding subunit compare
BWI76_RS00475 +0.9 3.6 sulfurtransferase FdhD compare
BWI76_RS01565 +0.9 1.1 NADH pyrophosphatase compare
BWI76_RS09240 +0.9 1.5 phosphoadenosine phosphosulfate reductase compare
BWI76_RS18755 +0.9 0.7 adenosylcobinamide kinase/adenosylcobinamide-phosphate guanylyltransferase compare
BWI76_RS14170 +0.9 1.5 hypothetical protein compare
BWI76_RS25245 +0.9 1.3 3-deoxy-D-manno-octulosonate 8-phosphate phosphatase compare
BWI76_RS11125 +0.9 0.9 metal-dependent hydrolase compare
BWI76_RS12500 +0.9 1.2 dipeptide epimerase compare
BWI76_RS20565 +0.9 0.9 hypothetical protein compare
BWI76_RS08645 +0.9 1.8 molybdate ABC transporter substrate-binding protein compare
BWI76_RS05870 +0.9 2.3 ABC transporter compare
BWI76_RS15080 +0.9 6.5 hypothetical protein compare
BWI76_RS14970 +0.9 0.9 pyrroline-5-carboxylate reductase compare
BWI76_RS27825 +0.9 2.7 hypothetical protein compare
BWI76_RS14435 +0.9 1.0 glutamine ABC transporter ATP-binding protein compare
BWI76_RS09610 +0.9 1.6 ATP-dependent Clp protease adaptor ClpS compare
BWI76_RS22815 +0.9 4.9 hybrid sensor histidine kinase/response regulator compare
BWI76_RS13160 +0.9 0.9 azoreductase compare
BWI76_RS25980 +0.9 1.3 hypothetical protein compare
BWI76_RS08905 +0.9 2.8 transketolase compare
BWI76_RS27745 +0.9 1.2 PTS sugar transporter subunit IIB compare
BWI76_RS06735 +0.9 1.1 50S ribosomal protein L31 compare
BWI76_RS23340 +0.9 1.5 transcriptional regulator compare
BWI76_RS05235 +0.9 0.7 hypothetical protein compare
BWI76_RS18065 +0.9 0.9 DNA polymerase III subunit theta compare
BWI76_RS20890 +0.9 2.0 neutral zinc metallopeptidase compare
BWI76_RS12545 +0.9 1.1 hypothetical protein compare
BWI76_RS25425 +0.9 0.4 arginine repressor compare
BWI76_RS13855 +0.9 1.5 peroxiredoxin compare
BWI76_RS07760 +0.9 1.7 2,3-dihydro-2,3-dihydroxybenzoate dehydrogenase compare
BWI76_RS07500 +0.9 1.4 RND transporter MFP subunit compare
BWI76_RS12575 +0.9 2.6 FAD-dependent oxidoreductase compare
BWI76_RS04950 +0.9 2.2 membrane-bound PQQ-dependent dehydrogenase, glucose/quinate/shikimate family compare
BWI76_RS15030 +0.9 1.5 ABC transporter compare
BWI76_RS06565 +0.9 3.6 putative periplasmic solute-binding protein compare
BWI76_RS16140 +0.9 1.4 3-oxoadipate CoA-transferase compare
BWI76_RS26570 +0.9 0.8 anion permease compare
BWI76_RS04055 +0.9 6.1 GGDEF domain-containing protein compare
BWI76_RS10700 +0.9 1.1 XRE family transcriptional regulator compare
BWI76_RS06125 +0.9 2.8 D-alanine--D-alanine ligase A compare
BWI76_RS23495 +0.9 2.8 hypothetical protein compare
BWI76_RS23400 +0.9 2.4 oligogalacturonide lyase compare
BWI76_RS11155 +0.9 0.8 penicillin-binding protein activator LpoB compare
BWI76_RS07680 +0.9 2.9 transketolase compare
BWI76_RS07970 +0.9 1.4 hypothetical protein compare
BWI76_RS17470 +0.8 0.7 MerR family transcriptional regulator compare
BWI76_RS08585 +0.8 1.6 nicotinamide riboside transporter PnuC compare
BWI76_RS04895 +0.8 1.3 hypothetical protein compare
BWI76_RS09065 +0.8 1.4 sugar phosphatase SupH compare
BWI76_RS08545 +0.8 1.6 cell division protein CpoB compare
BWI76_RS01650 +0.8 1.7 acetyltransferase compare
BWI76_RS17945 +0.8 0.7 hypothetical protein compare
BWI76_RS03615 +0.8 2.6 putative transcriptional regulatory protein compare
BWI76_RS00330 +0.8 4.3 molybdenum cofactor guanylyltransferase compare
BWI76_RS24810 +0.8 1.9 hypothetical protein compare
BWI76_RS11710 +0.8 1.6 nucleotide excision repair endonuclease compare
BWI76_RS17400 +0.8 0.6 transporter compare
BWI76_RS11525 +0.8 1.3 HNH endonuclease compare
BWI76_RS00060 +0.8 0.9 N-acetylneuraminate lyase compare
BWI76_RS20775 +0.8 2.2 ethanolamine utilization protein EutH compare
BWI76_RS19100 +0.8 1.9 putative acid phosphatase compare
BWI76_RS13125 +0.8 1.8 3-hydroxyacyl-CoA dehydrogenase compare
BWI76_RS15445 +0.8 1.3 hypothetical protein compare
BWI76_RS08825 +0.8 1.7 cyclic pyranopterin monophosphate synthase MoaC compare
BWI76_RS10890 +0.8 1.5 glyoxylate/hydroxypyruvate reductase A compare
BWI76_RS12420 +0.8 0.5 peptide ABC transporter substrate-binding protein SapA compare
BWI76_RS01690 +0.8 1.7 membrane protein compare
BWI76_RS14065 +0.8 0.6 hypothetical protein compare
BWI76_RS16315 +0.8 0.5 SirA-like protein compare
BWI76_RS18080 +0.8 2.0 protein YebE compare
BWI76_RS15190 +0.8 1.3 GGDEF domain-containing protein compare
BWI76_RS05425 +0.8 2.1 EEP domain-containing protein compare
BWI76_RS23210 +0.8 1.6 threonine-phosphate decarboxylase compare
BWI76_RS22365 +0.8 2.7 hydrogenase expression/formation protein HypE compare
BWI76_RS16925 +0.8 2.6 3-(3-hydroxyphenyl)propionate hydroxylase compare
BWI76_RS02020 +0.8 3.7 Na+/H+ antiporter compare
BWI76_RS16655 +0.8 1.9 CatA-like O-acetyltransferase compare
BWI76_RS17065 +0.8 3.9 phosphoenolpyruvate synthase compare
BWI76_RS06175 +0.8 1.6 DUF188 domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted in Klebsiella michiganensis M5al

For supernatant Supernatant; Trichoderma harzianum M10 grown in Fungal_growth_media_mCAFEs_v2, filtered and pH-adjusted across organisms