Experiment set13H6 for Pseudomonas stutzeri RCH2

Compare to:

L-Valine nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
Psest_1083 -3.3 -12.4 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) compare
Psest_3517 -2.9 -18.1 branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate (from data) conserved
Psest_2437 -1.9 -5.5 Enoyl-CoA hydratase [valine degradation] (EC 4.2.1.17) (from data) conserved
Psest_2158 -1.9 -13.9 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase compare
Psest_2438 -1.8 -9.1 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) compare
Psest_1084 -1.6 -9.8 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) compare
Psest_2440 -1.5 -6.5 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) conserved
Psest_1402 -1.3 -7.2 Putative threonine efflux protein compare
Psest_2436 -1.2 -6.1 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) compare
Psest_1443 +1.2 7.7 Uncharacterized protein involved in formation of curli polymers compare
Psest_1569 +1.3 7.7 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_2489 +1.4 9.2 branched-chain amino acid uptake carrier conserved
Psest_3515 +1.5 8.8 Na+-dependent transporters of the SNF family compare
Psest_4076 +2.1 10.9 hypothetical protein compare
Psest_1187 +2.1 6.8 exodeoxyribonuclease III compare
Psest_3192 +2.2 10.9 diguanylate cyclase (GGDEF) domain compare
Psest_0956 +2.2 12.4 Transcriptional regulators compare


Specific phenotypes for nitrogen source L-Valine across organisms