Experiment set13H5 for Pseudomonas stutzeri RCH2

Compare to:

L-Valine nitrogen source

Genes with specific phenotypes:

  gene name fitness t score description  
Psest_1083 -2.9 -11.3 3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4) (from data) compare
Psest_3517 -2.6 -16.4 branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate (from data) conserved
Psest_2158 -1.9 -13.6 alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase compare
Psest_2438 -1.6 -7.0 3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31) (from data) compare
Psest_1084 -1.6 -9.2 Isovaleryl-CoA dehydrogenase (EC 1.3.8.4) (from data) compare
Psest_2436 -1.5 -6.3 Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27) (from data) compare
Psest_2440 -1.5 -5.5 isobutyryl-CoA dehydrogenase (EC 1.3.8.5) (from data) conserved
Psest_2435 -1.4 -5.1 Transcriptional regulator conserved
Psest_1619 -1.4 -5.5 Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1 compare
Psest_2439 -1.3 -6.8 3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4) (from data) conserved
Psest_1464 -1.3 -5.5 Selenocysteine lyase compare
Psest_0571 -1.2 -5.2 Transcriptional regulators compare
Psest_1402 -1.2 -6.5 Putative threonine efflux protein compare
Psest_3993 -1.2 -6.2 alpha-L-glutamate ligases, RimK family compare
Psest_1443 +1.1 5.6 Uncharacterized protein involved in formation of curli polymers compare
Psest_1991 +1.1 7.8 Glutathione S-transferase compare
Psest_2489 +1.1 6.6 branched-chain amino acid uptake carrier conserved
Psest_1569 +1.2 7.1 PAS domain S-box/diguanylate cyclase (GGDEF) domain compare
Psest_3515 +1.7 8.7 Na+-dependent transporters of the SNF family compare
Psest_4076 +1.8 9.6 hypothetical protein compare
Psest_1187 +2.0 5.8 exodeoxyribonuclease III compare
Psest_0956 +2.0 11.9 Transcriptional regulators compare
Psest_3192 +2.3 11.2 diguanylate cyclase (GGDEF) domain compare


Specific phenotypes for nitrogen source L-Valine across organisms