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Experiment set13H5 for
Pseudomonas stutzeri RCH2
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L-Valine nitrogen source
Genes with
specific
phenotypes:
gene
name
fitness
t score
description
Psest
_1083
-2.9
-11.3
3-methylcrotonyl-CoA carboxylase, beta subunit (EC 6.4.1.4)
(from data)
compare
Psest
_3517
-2.6
-16.4
branched-chain ketoacid ferredoxin reductase (EC 1.2.7.7) active on 4-methyl-2-oxopentanoate, (S)-3-methyl-2-oxopentanoate, or 3-methyl-2-oxobutanoate
(from data)
conserved
Psest
_2158
-1.9
-13.6
alpha-1,4-glucan:alpha-1,4-glucan 6-glycosyltransferase
compare
Psest
_2438
-1.6
-7.0
3-hydroxyisobutyrate dehydrogenase (EC 1.1.1.31)
(from data)
compare
Psest
_1084
-1.6
-9.2
Isovaleryl-CoA dehydrogenase (EC 1.3.8.4)
(from data)
compare
Psest
_2436
-1.5
-6.3
Methylmalonate-semialdehyde dehydrogenase (EC 1.2.1.27)
(from data)
compare
Psest
_2440
-1.5
-5.5
isobutyryl-CoA dehydrogenase (EC 1.3.8.5)
(from data)
conserved
Psest
_2435
-1.4
-5.1
Transcriptional regulator
conserved
Psest
_1619
-1.4
-5.5
Dinucleotide-utilizing enzymes involved in molybdopterin and thiamine biosynthesis family 1
compare
Psest
_2439
-1.3
-6.8
3-hydroxyisobutyryl-CoA hydrolase (EC 3.1.2.4)
(from data)
conserved
Psest
_1464
-1.3
-5.5
Selenocysteine lyase
compare
Psest
_0571
-1.2
-5.2
Transcriptional regulators
compare
Psest
_1402
-1.2
-6.5
Putative threonine efflux protein
compare
Psest
_3993
-1.2
-6.2
alpha-L-glutamate ligases, RimK family
compare
Psest
_1443
+1.1
5.6
Uncharacterized protein involved in formation of curli polymers
compare
Psest
_1991
+1.1
7.8
Glutathione S-transferase
compare
Psest
_2489
+1.1
6.6
branched-chain amino acid uptake carrier
conserved
Psest
_1569
+1.2
7.1
PAS domain S-box/diguanylate cyclase (GGDEF) domain
compare
Psest
_3515
+1.7
8.7
Na+-dependent transporters of the SNF family
compare
Psest
_4076
+1.8
9.6
hypothetical protein
compare
Psest
_1187
+2.0
5.8
exodeoxyribonuclease III
compare
Psest
_0956
+2.0
11.9
Transcriptional regulators
compare
Psest
_3192
+2.3
11.2
diguanylate cyclase (GGDEF) domain
compare
Specific phenotypes for nitrogen source L-Valine across organisms