Experiment set13H36 for Pseudomonas stutzeri RCH2

Compare to:

LB with Doxycycline hyclate 0.0002 mg/ml

Group: stress
Media: LB + Doxycycline hyclate (2e-04 mg/ml)
Culturing: psRCH2_ML7c, 48 well microplate; Tecan Infinite F200, Aerobic, at 30 (C), shaken=orbital
By: Kelly on 2/27/2014
Media components: 10 g/L Tryptone, 5 g/L Yeast Extract, 5 g/L Sodium Chloride

Specific Phenotypes

For 5 genes in this experiment

For stress Doxycycline hyclate in Pseudomonas stutzeri RCH2

For stress Doxycycline hyclate across organisms

SEED Subsystems

Subsystem #Specific
Glycerolipid and Glycerophospholipid Metabolism in Bacteria 1
Phosphate metabolism 1
Polyamine Metabolism 1

Metabolic Maps

Color code by fitness: see overview map or list of maps.

Maps containing gene(s) with specific phenotypes:

MetaCyc Pathways

Pathways that contain genes with specific phenotypes:

Pathway #Steps #Present #Specific
palmitoleate biosynthesis III (cyanobacteria) 2 1 1
phospholipid remodeling (phosphatidate, yeast) 2 1 1
oleate biosynthesis III (cyanobacteria) 3 2 1
CDP-diacylglycerol biosynthesis I 4 4 1
CDP-diacylglycerol biosynthesis II 4 4 1
phosphatidate biosynthesis (yeast) 5 3 1
CDP-diacylglycerol biosynthesis III 5 3 1
phosphatidylglycerol biosynthesis II 6 6 1
phosphatidylglycerol biosynthesis I 6 6 1
superpathway of phospholipid biosynthesis III (E. coli) 12 10 2
superpathway of stearidonate biosynthesis (cyanobacteria) 6 2 1
palmitoyl ethanolamide biosynthesis 6 2 1
diacylglycerol and triacylglycerol biosynthesis 7 3 1
stigma estolide biosynthesis 7 2 1
anandamide biosynthesis II 8 2 1
anandamide biosynthesis I 12 3 1
superpathway of cardiolipin biosynthesis (bacteria) 13 9 1
superpathway of phospholipid biosynthesis II (plants) 28 10 2
plasmalogen biosynthesis I (aerobic) 16 1 1