Experiment set12S654 for Rhodanobacter denitrificans FW104-10B01

200 most important genes:

gene	name	fitness	t score	description
LRK54_RS12725		-2.6	-9.5	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
LRK54_RS12135		-2.2	-8.7	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
LRK54_RS03920		-2.1	-1.4	hypothetical protein
LRK54_RS03905		-1.7	-4.8	glycosyltransferase
LRK54_RS03900		-1.7	-6.7	class I SAM-dependent methyltransferase
LRK54_RS00430		-1.6	-1.1	NUDIX hydrolase
LRK54_RS16815		-1.6	-1.5	hypothetical protein
LRK54_RS12030		-1.6	-4.6	methylenetetrahydrofolate reductase [NAD(P)H]
LRK54_RS02815		-1.5	-1.7	hypothetical protein
LRK54_RS00175		-1.4	-1.0	transposase
LRK54_RS10170		-1.4	-11.5	YbaY family lipoprotein
LRK54_RS07195		-1.4	-1.1	hypothetical protein
LRK54_RS05275		-1.4	-1.2	type II toxin-antitoxin system RelE/ParE family toxin
LRK54_RS06370		-1.3	-2.8	benenodin family lasso peptide
LRK54_RS10925		-1.3	-0.9	cell division ATP-binding protein FtsE
LRK54_RS16350		-1.3	-1.5	helix-turn-helix domain-containing protein
LRK54_RS07290		-1.3	-1.7	VanZ family protein
LRK54_RS05310		-1.3	-4.9	homoserine O-succinyltransferase
LRK54_RS11725		-1.3	-1.4	PilZ domain-containing protein
LRK54_RS17025		-1.3	-1.0	cold-shock protein
LRK54_RS08335		-1.3	-2.6	MbcA/ParS/Xre antitoxin family protein
LRK54_RS03910		-1.3	-3.5	glycosyltransferase
LRK54_RS04590		-1.2	-1.5	3,4-dihydroxy-2-butanone-4-phosphate synthase
LRK54_RS04545		-1.2	-3.9	hemin uptake protein HemP
LRK54_RS11570		-1.2	-2.0	indole-3-glycerol phosphate synthase TrpC
LRK54_RS14450		-1.2	-1.7	hypothetical protein
LRK54_RS06895		-1.1	-1.1	hotdog fold thioesterase
LRK54_RS12735		-1.1	-1.3	NAD-dependent epimerase/dehydratase family protein
LRK54_RS11375		-1.1	-2.3	phosphoribosylaminoimidazolesuccinocarboxamide synthase
LRK54_RS04100		-1.1	-1.0	ATP-binding cassette domain-containing protein
LRK54_RS05305		-1.1	-5.6	cystathionine gamma-synthase
LRK54_RS05500		-1.0	-2.2	hypothetical protein
LRK54_RS11290		-1.0	-0.9	dihydrolipoyllysine-residue acetyltransferase
LRK54_RS05770		-1.0	-5.9	energy transducer TonB
LRK54_RS15360		-0.9	-1.7	arginase family protein
LRK54_RS03760		-0.9	-2.3	DUF2321 domain-containing protein
LRK54_RS15325		-0.9	-0.5	hypothetical protein
LRK54_RS12850		-0.9	-1.8	HPr family phosphocarrier protein
LRK54_RS04210		-0.9	-1.8	YqgE/AlgH family protein
LRK54_RS14580		-0.9	-0.6	hypothetical protein
LRK54_RS11285		-0.9	-1.8	ABC transporter ATP-binding protein
LRK54_RS04245		-0.9	-1.4	BON domain-containing protein
LRK54_RS00750		-0.9	-1.0	response regulator transcription factor
LRK54_RS13680		-0.9	-2.6	STAS domain-containing protein
LRK54_RS17035		-0.9	-1.5	copper homeostasis protein CutC
LRK54_RS06155		-0.9	-0.8	cysteine dioxygenase
LRK54_RS06820		-0.8	-0.7	Fis family transcriptional regulator
LRK54_RS13540		-0.8	-0.7	flagellar biosynthetic protein FliO
LRK54_RS16930		-0.8	-3.8	hypothetical protein
LRK54_RS02410		-0.8	-1.7	FMN-binding negative transcriptional regulator
LRK54_RS12200		-0.8	-3.2	division/cell wall cluster transcriptional repressor MraZ
LRK54_RS07430		-0.8	-1.7	nuclear transport factor 2 family protein
LRK54_RS05855		-0.8	-1.3	MarR family transcriptional regulator
LRK54_RS04860		-0.8	-1.9	7-carboxy-7-deazaguanine synthase QueE
LRK54_RS00025		-0.8	-1.7	cold shock domain-containing protein
LRK54_RS14165		-0.8	-2.3	TIGR00730 family Rossman fold protein
LRK54_RS12945		-0.8	-3.4	phosphoribosylformylglycinamidine cyclo-ligase
LRK54_RS15200		-0.8	-1.1	AraC family transcriptional regulator
LRK54_RS01680		-0.8	-1.6	tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data)
LRK54_RS03750		-0.8	-2.1	DUF2069 domain-containing protein
LRK54_RS16355		-0.7	-2.5	hypothetical protein
LRK54_RS04940		-0.7	-1.7	zinc ribbon domain-containing protein
LRK54_RS17400		-0.7	-0.5	hypothetical protein
LRK54_RS10355		-0.7	-0.7	threonine synthase
LRK54_RS09735		-0.7	-1.4	hydroxymyristoyl-ACP dehydratase
LRK54_RS04305		-0.7	-0.9	shikimate kinase
LRK54_RS06360		-0.7	-2.4	GntR family transcriptional regulator
LRK54_RS00275		-0.7	-0.9	BolA family transcriptional regulator
LRK54_RS07495		-0.7	-2.7	hypothetical protein
LRK54_RS06875		-0.7	-0.6	YiiD C-terminal domain-containing protein
LRK54_RS00835		-0.7	-2.4	LysR substrate-binding domain-containing protein
LRK54_RS08025		-0.7	-1.5	NAD(P)-dependent oxidoreductase
LRK54_RS11985		-0.7	-1.9	tRNA (guanosine(46)-N7)-methyltransferase TrmB
LRK54_RS16735		-0.7	-3.4	endopeptidase La
LRK54_RS09440		-0.7	-3.3	FecR domain-containing protein
LRK54_RS17900		-0.7	-0.4	4a-hydroxytetrahydrobiopterin dehydratase
LRK54_RS11565		-0.7	-1.2	anthranilate phosphoribosyltransferase
LRK54_RS02065		-0.7	-1.7	GNAT family N-acetyltransferase
LRK54_RS13620		-0.7	-0.9	hypothetical protein
LRK54_RS15040		-0.7	-1.4	glutaredoxin 3
LRK54_RS02415		-0.6	-2.3	N-acetylornithine carbamoyltransferase
LRK54_RS17760		-0.6	-0.8	cation transporter
LRK54_RS12055		-0.6	-0.7	dipeptide epimerase
LRK54_RS03365		-0.6	-1.3	polyprenyl synthetase family protein
LRK54_RS16935		-0.6	-4.0	bifunctional diguanylate cyclase/phosphodiesterase
LRK54_RS00305		-0.6	-2.2	asparagine synthase B
LRK54_RS02435		-0.6	-4.7	TonB-dependent siderophore receptor
LRK54_RS15520		-0.6	-2.2	glutathione S-transferase N-terminal domain-containing protein
LRK54_RS14980		-0.6	-1.7	recombinase RecA
LRK54_RS03055		-0.6	-2.3	non-heme iron oxygenase ferredoxin subunit
LRK54_RS13625		-0.6	-0.9	flagellar hook-length control protein FliK
LRK54_RS14785		-0.6	-1.3	NADH:flavin oxidoreductase/NADH oxidase
LRK54_RS07180		-0.6	-0.8	dethiobiotin synthase
LRK54_RS06815		-0.6	-2.1	zinc-ribbon and DUF3426 domain-containing protein
LRK54_RS14430		-0.6	-2.4	isocitrate lyase/phosphoenolpyruvate mutase family protein
LRK54_RS06240		-0.6	-0.7	hypothetical protein
LRK54_RS04540		-0.6	-3.5	hypothetical protein
LRK54_RS04470		-0.6	-2.4	3-oxoadipyl-CoA thiolase
LRK54_RS13790		-0.6	-0.9	DUF3301 domain-containing protein
LRK54_RS01465		-0.6	-1.7	RNA-binding S4 domain-containing protein
LRK54_RS01800		-0.6	-0.9	dCTP deaminase
LRK54_RS00045		-0.6	-1.7	carboxypeptidase-like regulatory domain-containing protein
LRK54_RS12870		-0.6	-4.6	ribosome-associated translation inhibitor RaiA
LRK54_RS15980		-0.6	-2.3	class I SAM-dependent methyltransferase
LRK54_RS06745		-0.6	-1.4	mitochondrial fission ELM1 family protein
LRK54_RS16850		-0.6	-1.4	DUF5334 family protein
LRK54_RS14950		-0.6	-1.3	DUF4852 domain-containing protein
LRK54_RS15635		-0.6	-1.5	DUF1656 domain-containing protein
LRK54_RS17640		-0.6	-0.9	PepSY domain-containing protein
LRK54_RS10280		-0.6	-1.7	PspC domain-containing protein
LRK54_RS02905		-0.6	-1.5	YggS family pyridoxal phosphate-dependent enzyme
LRK54_RS00410		-0.6	-0.9	polyhydroxyalkanoic acid system family protein
LRK54_RS10330		-0.6	-1.0	3-isopropylmalate dehydratase small subunit
LRK54_RS00630		-0.6	-2.1	RNA chaperone Hfq
LRK54_RS06480		-0.6	-2.6	lipoyl(octanoyl) transferase LipB
LRK54_RS06565		-0.5	-3.4	DUF192 domain-containing protein
LRK54_RS16435		-0.5	-1.2	helix-turn-helix transcriptional regulator
LRK54_RS13555		-0.5	-1.5	flagellar biosynthetic protein FliR
LRK54_RS10065		-0.5	-0.4	2-amino-4-hydroxy-6- hydroxymethyldihydropteridine diphosphokinase
LRK54_RS18105		-0.5	-0.8	DNA oxidative demethylase AlkB
LRK54_RS06300		-0.5	-2.3	GNAT family N-acetyltransferase
LRK54_RS00030		-0.5	-2.4	virulence protein RhuM/Fic/DOC family protein
LRK54_RS09725		-0.5	-0.8	phosphopantetheine-binding protein
LRK54_RS04370		-0.5	-1.5	threonine/serine exporter family protein
LRK54_RS04025		-0.5	-0.3	diacylglycerol kinase
LRK54_RS13470		-0.5	-2.1	flagellar export chaperone FliS
LRK54_RS00740		-0.5	-1.5	peptidylprolyl isomerase
LRK54_RS16310		-0.5	-1.9	response regulator
LRK54_RS08540		-0.5	-2.0	DUF484 family protein
LRK54_RS09125		-0.5	-1.5	hypothetical protein
LRK54_RS16600		-0.5	-1.3	aminopeptidase P family protein
LRK54_RS04655		-0.5	-1.5	peptide deformylase
LRK54_RS05710		-0.5	-3.9	pyridoxal-phosphate dependent enzyme
LRK54_RS16150		-0.5	-0.8	cell wall hydrolase
LRK54_RS13800		-0.5	-3.0	DUF1631 domain-containing protein
LRK54_RS15550		-0.5	-1.3	alkyl hydroperoxide reductase
LRK54_RS17550		-0.5	-1.0	P-II family nitrogen regulator
LRK54_RS13475		-0.5	-1.3	flagellar protein FliT
LRK54_RS06535		-0.5	-4.1	glycerol kinase GlpK
LRK54_RS03780		-0.5	-1.2	hypothetical protein
LRK54_RS00015		-0.5	-0.6	hypothetical protein
LRK54_RS09865		-0.5	-0.7	CRISPR-associated endonuclease Cas2
LRK54_RS16825		-0.5	-1.4	hypothetical protein
LRK54_RS07775		-0.5	-0.7	MarR family transcriptional regulator
LRK54_RS08875		-0.5	-1.5	DUF3892 domain-containing protein
LRK54_RS14955		-0.5	-1.5	hypothetical protein
LRK54_RS06045		-0.5	-2.2	hypothetical protein
LRK54_RS02600		-0.5	-1.6	hypothetical protein
LRK54_RS18025		-0.5	-2.3	acyl-CoA-binding protein
LRK54_RS14815		-0.5	-1.6	beta-ketoacyl-ACP reductase
LRK54_RS04035		-0.5	-1.9	ATP-binding protein
LRK54_RS14135		-0.5	-1.8	PepSY domain-containing protein
LRK54_RS09945		-0.5	-1.2	class I SAM-dependent methyltransferase
LRK54_RS02945		-0.5	-3.5	response regulator
LRK54_RS02955		-0.5	-1.4	efflux transporter outer membrane subunit
LRK54_RS17560		-0.5	-1.2	efflux RND transporter periplasmic adaptor subunit
LRK54_RS16245		-0.5	-1.8	ABC transporter ATP-binding protein
LRK54_RS00450		-0.5	-1.0	ribonuclease T
LRK54_RS15645		-0.5	-1.1	MarR family transcriptional regulator
LRK54_RS06600		-0.5	-3.2	NAD(P)-dependent oxidoreductase
LRK54_RS17595		-0.5	-1.1	TolC family protein
LRK54_RS04355		-0.5	-2.4	DUF4124 domain-containing protein
LRK54_RS14215		-0.5	-2.0	cation-translocating P-type ATPase
LRK54_RS16460		-0.5	-1.6	hypothetical protein
LRK54_RS04615		-0.5	-1.2	transcriptional regulator NrdR
LRK54_RS05660		-0.5	-3.1	PLP-dependent aspartate aminotransferase family protein
LRK54_RS11750		-0.5	-1.7	YicC family protein
LRK54_RS14780		-0.5	-2.5	alpha/beta fold hydrolase
LRK54_RS09825		-0.5	-1.9	alpha/beta hydrolase
LRK54_RS05580		-0.5	-0.8	hypothetical protein
LRK54_RS01720		-0.5	-0.4	hydroxyacid dehydrogenase
LRK54_RS17210		-0.5	-0.6	hypothetical protein
LRK54_RS16855		-0.5	-2.5	hypothetical protein
LRK54_RS11900		-0.5	-2.0	efflux RND transporter periplasmic adaptor subunit
LRK54_RS11995		-0.5	-2.3	tRNA-Gly
LRK54_RS14485		-0.5	-4.0	polyketide cyclase
LRK54_RS15720		-0.5	-0.5	ATP-binding cassette domain-containing protein
LRK54_RS12080		-0.4	-2.1	HlyD family efflux transporter periplasmic adaptor subunit
LRK54_RS09480		-0.4	-1.6	TIGR04282 family arsenosugar biosynthesis glycosyltransferase
LRK54_RS04060		-0.4	-2.0	isoaspartyl peptidase/L-asparaginase
LRK54_RS00940		-0.4	-1.7	cupin domain-containing protein
LRK54_RS02020		-0.4	-0.8	DUF2058 domain-containing protein
LRK54_RS15165		-0.4	-0.6	enoyl-CoA hydratase-related protein
LRK54_RS12005		-0.4	-1.5	30S ribosomal protein S6--L-glutamate ligase
LRK54_RS14655		-0.4	-1.0	peptide-methionine (R)-S-oxide reductase MsrB
LRK54_RS06475		-0.4	-1.3	lipoyl synthase
LRK54_RS11820		-0.4	-3.8	citrate synthase
LRK54_RS13750		-0.4	-1.9	tRNA (N6-isopentenyl adenosine(37)-C2)-methylthiotransferase MiaB
LRK54_RS08380		-0.4	-1.4	type II toxin-antitoxin system HipA family toxin YjjJ
LRK54_RS04450		-0.4	-0.7	efflux RND transporter periplasmic adaptor subunit
LRK54_RS01560		-0.4	-1.1	carboxymuconolactone decarboxylase family protein
LRK54_RS13635		-0.4	-1.5	response regulator
LRK54_RS15385		-0.4	-1.8	phosphosulfolactate synthase
LRK54_RS00035		-0.4	-1.6	redoxin domain-containing protein
LRK54_RS17090		-0.4	-1.0	isochorismatase family protein
LRK54_RS02385		-0.4	-1.4	N-acetyl-gamma-glutamyl-phosphate reductase
LRK54_RS00910		-0.4	-1.7	siroheme synthase CysG
LRK54_RS02665		-0.4	-2.0	YkgJ family cysteine cluster protein
LRK54_RS00685		-0.4	-1.8	hypothetical protein
LRK54_RS02650		-0.4	-2.2	DEAD/DEAH box helicase

Specific Phenotypes

For 1 genes in this experiment