Experiment set12S642 for Rhodanobacter denitrificans FW104-10B01

200 most important genes:

gene	name	fitness	t score	description
LRK54_RS12725		-2.9	-8.9	bifunctional (p)ppGpp synthetase/guanosine-3',5'-bis(diphosphate) 3'-pyrophosphohydrolase
LRK54_RS12135		-2.1	-9.5	5-methyltetrahydropteroyltriglutamate-- homocysteine S-methyltransferase
LRK54_RS12030		-2.0	-5.5	methylenetetrahydrofolate reductase [NAD(P)H]
LRK54_RS04615		-1.9	-2.9	transcriptional regulator NrdR
LRK54_RS06420		-1.9	-1.3	hypothetical protein
LRK54_RS05310		-1.8	-6.1	homoserine O-succinyltransferase
LRK54_RS03905		-1.8	-4.9	glycosyltransferase
LRK54_RS03900		-1.7	-7.0	class I SAM-dependent methyltransferase
LRK54_RS13620		-1.6	-2.1	hypothetical protein
LRK54_RS02815		-1.6	-1.8	hypothetical protein
LRK54_RS17220		-1.4	-1.6	cbb3-type cytochrome c oxidase subunit 3
LRK54_RS10170		-1.4	-11.8	YbaY family lipoprotein
LRK54_RS03700		-1.4	-1.3	4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase
LRK54_RS15365		-1.3	-1.2	hypothetical protein
LRK54_RS05305		-1.3	-6.8	cystathionine gamma-synthase
LRK54_RS09345		-1.2	-1.1	ATP-binding protein
LRK54_RS03910		-1.2	-3.7	glycosyltransferase
LRK54_RS16810		-1.2	-1.4	hypothetical protein
LRK54_RS05500		-1.2	-2.6	hypothetical protein
LRK54_RS13625		-1.2	-1.5	flagellar hook-length control protein FliK
LRK54_RS10195		-1.1	-1.8	hypothetical protein
LRK54_RS13790		-1.1	-1.6	DUF3301 domain-containing protein
LRK54_RS04545		-1.1	-3.5	hemin uptake protein HemP
LRK54_RS05770		-1.1	-6.6	energy transducer TonB
LRK54_RS14580		-1.1	-0.7	hypothetical protein
LRK54_RS12735		-1.1	-1.3	NAD-dependent epimerase/dehydratase family protein
LRK54_RS08540		-1.0	-3.5	DUF484 family protein
LRK54_RS17830		-1.0	-0.7	mercury resistance system periplasmic binding protein MerP
LRK54_RS04995		-1.0	-1.9	LacI family DNA-binding transcriptional regulator
LRK54_RS13475		-1.0	-2.4	flagellar protein FliT
LRK54_RS11725		-1.0	-1.2	PilZ domain-containing protein
LRK54_RS14450		-1.0	-1.8	hypothetical protein
LRK54_RS16815		-1.0	-1.1	hypothetical protein
LRK54_RS16350		-0.9	-1.4	helix-turn-helix domain-containing protein
LRK54_RS16735		-0.9	-4.6	endopeptidase La
LRK54_RS02365		-0.9	-1.4	ABC transporter ATP-binding protein
LRK54_RS16150		-0.9	-1.9	cell wall hydrolase
LRK54_RS11565		-0.9	-1.5	anthranilate phosphoribosyltransferase
LRK54_RS06970		-0.9	-2.3	helix-turn-helix transcriptional regulator
LRK54_RS06820		-0.9	-0.8	Fis family transcriptional regulator
LRK54_RS12830		-0.9	-1.9	YeiH family protein
LRK54_RS13970		-0.9	-1.8	MoaD/ThiS family protein
LRK54_RS08335		-0.9	-2.1	MbcA/ParS/Xre antitoxin family protein
LRK54_RS13710		-0.8	-3.6	CBS domain-containing protein
LRK54_RS15200		-0.8	-1.3	AraC family transcriptional regulator
LRK54_RS16255		-0.8	-1.2	efflux RND transporter periplasmic adaptor subunit
LRK54_RS01955		-0.8	-1.4	thymidine phosphorylase family protein
LRK54_RS17560		-0.8	-1.8	efflux RND transporter periplasmic adaptor subunit
LRK54_RS17060		-0.8	-1.0	RidA family protein
LRK54_RS12200		-0.8	-3.5	division/cell wall cluster transcriptional repressor MraZ
LRK54_RS09105		-0.8	-1.9	energy transducer TonB
LRK54_RS13020		-0.8	-2.3	ACT domain-containing protein
LRK54_RS04540		-0.8	-4.5	hypothetical protein
LRK54_RS06875		-0.8	-0.7	YiiD C-terminal domain-containing protein
LRK54_RS15015		-0.8	-3.2	Ppx/GppA family phosphatase
LRK54_RS16670		-0.8	-2.8	Mth938-like domain-containing protein
LRK54_RS05855		-0.8	-1.4	MarR family transcriptional regulator
LRK54_RS15165		-0.8	-0.9	enoyl-CoA hydratase-related protein
LRK54_RS00450		-0.8	-1.5	ribonuclease T
LRK54_RS00175		-0.8	-0.7	transposase
LRK54_RS11000		-0.8	-2.5	HutD family protein
LRK54_RS14980		-0.8	-2.1	recombinase RecA
LRK54_RS06030		-0.8	-1.4	phage baseplate assembly protein V
LRK54_RS00750		-0.8	-0.9	response regulator transcription factor
LRK54_RS00575		-0.7	-1.0	hypothetical protein
LRK54_RS02435		-0.7	-5.5	TonB-dependent siderophore receptor
LRK54_RS16945		-0.7	-1.4	sigma-E factor negative regulatory protein
LRK54_RS00810		-0.7	-1.1	SMC-Scp complex subunit ScpB
LRK54_RS13800		-0.7	-4.3	DUF1631 domain-containing protein
LRK54_RS00275		-0.7	-1.0	BolA family transcriptional regulator
LRK54_RS03755		-0.7	-2.3	hypothetical protein
LRK54_RS16935		-0.7	-4.7	bifunctional diguanylate cyclase/phosphodiesterase
LRK54_RS00885		-0.7	-2.0	class II fumarate hydratase
LRK54_RS16675		-0.7	-2.7	ribosome assembly RNA-binding protein YhbY
LRK54_RS15040		-0.7	-1.7	glutaredoxin 3
LRK54_RS16930		-0.7	-3.5	hypothetical protein
LRK54_RS07005		-0.7	-4.4	spore coat protein U domain-containing protein
LRK54_RS14815		-0.7	-2.3	beta-ketoacyl-ACP reductase
LRK54_RS02145		-0.7	-1.5	Arc family DNA-binding protein
LRK54_RS08575		-0.7	-2.6	diphosphomevalonate decarboxylase
LRK54_RS11570		-0.7	-1.5	indole-3-glycerol phosphate synthase TrpC
LRK54_RS17990		-0.7	-2.6	2OG-Fe(II) oxygenase
LRK54_RS13585		-0.7	-1.4	chemotaxis response regulator CheY
LRK54_RS12995		-0.7	-1.0	MGMT family protein
LRK54_RS07735		-0.6	-3.2	metalloregulator ArsR/SmtB family transcription factor
LRK54_RS16405		-0.6	-2.1	VOC family protein
LRK54_RS00630		-0.6	-2.5	RNA chaperone Hfq
LRK54_RS09175		-0.6	-1.4	dUTP diphosphatase
LRK54_RS02475		-0.6	-3.5	TRZ/ATZ family hydrolase
LRK54_RS16830		-0.6	-1.8	hypothetical protein
LRK54_RS17900		-0.6	-0.6	4a-hydroxytetrahydrobiopterin dehydratase
LRK54_RS15215		-0.6	-2.0	DUF2059 domain-containing protein
LRK54_RS15025		-0.6	-1.5	phosphate regulon sensor histidine kinase PhoR
LRK54_RS11375		-0.6	-2.0	phosphoribosylaminoimidazolesuccinocarboxamide synthase
LRK54_RS09395		-0.6	-2.6	FecR domain-containing protein
LRK54_RS13120		-0.6	-2.1	hypothetical protein
LRK54_RS13395		-0.6	-1.4	methyl-accepting chemotaxis protein
LRK54_RS10925		-0.6	-0.4	cell division ATP-binding protein FtsE
LRK54_RS05925		-0.6	-3.4	YegP family protein
LRK54_RS00190		-0.6	-2.1	hypothetical protein
LRK54_RS06815		-0.6	-2.1	zinc-ribbon and DUF3426 domain-containing protein
LRK54_RS00740		-0.6	-1.8	peptidylprolyl isomerase
LRK54_RS12870		-0.6	-4.8	ribosome-associated translation inhibitor RaiA
LRK54_RS03075		-0.6	-2.6	acyltransferase
LRK54_RS05660		-0.6	-4.0	PLP-dependent aspartate aminotransferase family protein
LRK54_RS14900		-0.6	-3.4	TonB-dependent siderophore receptor
LRK54_RS14155		-0.6	-1.5	OsmC family protein
LRK54_RS06375		-0.6	-1.7	lasso peptide biosynthesis B2 protein
LRK54_RS00195		-0.6	-2.8	ATP-binding protein
LRK54_RS04370		-0.6	-1.6	threonine/serine exporter family protein
LRK54_RS10620		-0.6	-1.0	1-acyl-sn-glycerol-3-phosphate acyltransferase
LRK54_RS02825		-0.6	-2.2	sigma-70 family RNA polymerase sigma factor
LRK54_RS16825		-0.6	-1.8	hypothetical protein
LRK54_RS05195		-0.6	-1.3	sigma-70 family RNA polymerase sigma factor
LRK54_RS10660		-0.6	-0.4	DUF4156 domain-containing protein
LRK54_RS11680		-0.6	-1.1	cell division protein ZapA
LRK54_RS16160		-0.6	-0.8	DUF1674 domain-containing protein
LRK54_RS07775		-0.6	-0.8	MarR family transcriptional regulator
LRK54_RS00560		-0.6	-1.6	hypothetical protein
LRK54_RS01680		-0.6	-1.4	tryptophan synthase, alpha subunit (EC 4.2.1.20) (from data)
LRK54_RS00020		-0.6	-2.9	hypothetical protein
LRK54_RS18095		-0.6	-2.2	DUF2231 domain-containing protein
LRK54_RS13380		-0.6	-2.2	flagellar protein FlgN
LRK54_RS03055		-0.6	-2.0	non-heme iron oxygenase ferredoxin subunit
LRK54_RS04100		-0.5	-0.6	ATP-binding cassette domain-containing protein
LRK54_RS02955		-0.5	-1.6	efflux transporter outer membrane subunit
LRK54_RS16970		-0.5	-1.0	ribonuclease III
LRK54_RS00025		-0.5	-1.3	cold shock domain-containing protein
LRK54_RS06725		-0.5	-1.8	zinc-finger domain-containing protein
LRK54_RS00330		-0.5	-2.5	hypothetical protein
LRK54_RS02385		-0.5	-1.8	N-acetyl-gamma-glutamyl-phosphate reductase
LRK54_RS05710		-0.5	-4.0	pyridoxal-phosphate dependent enzyme
LRK54_RS13400		-0.5	-0.9	chemotaxis protein
LRK54_RS13235		-0.5	-2.2	polysaccharide pyruvyl transferase family protein
LRK54_RS16285		-0.5	-1.2	hypothetical protein
LRK54_RS05580		-0.5	-1.0	hypothetical protein
LRK54_RS15940		-0.5	-1.9	YkgJ family cysteine cluster protein
LRK54_RS15175		-0.5	-1.6	DUF1289 domain-containing protein
LRK54_RS12120		-0.5	-2.3	glutathione S-transferase family protein
LRK54_RS00165		-0.5	-3.3	hypothetical protein
LRK54_RS13870		-0.5	-2.2	helix-turn-helix domain-containing protein
LRK54_RS11820		-0.5	-4.4	citrate synthase
LRK54_RS14675		-0.5	-1.7	YajQ family cyclic di-GMP-binding protein
LRK54_RS06535		-0.5	-4.1	glycerol kinase GlpK
LRK54_RS12845		-0.5	-2.8	phosphoenolpyruvate--protein phosphotransferase
LRK54_RS05035		-0.5	-2.6	response regulator
LRK54_RS10365		-0.5	-2.2	homoserine dehydrogenase
LRK54_RS02640		-0.5	-1.9	DEAD/DEAH box helicase
LRK54_RS09210		-0.5	-1.3	anhydro-N-acetylmuramic acid kinase
LRK54_RS17980		-0.5	-2.7	molecular chaperone DnaJ
LRK54_RS18110		-0.5	-2.4	2OG-Fe(II) oxygenase
LRK54_RS04655		-0.5	-1.5	peptide deformylase
LRK54_RS14670		-0.5	-0.4	NrsF family protein
LRK54_RS17960		-0.5	-2.0	DNA repair protein RecN
LRK54_RS07675		-0.5	-1.4	CPBP family intramembrane metalloprotease
LRK54_RS02970		-0.5	-2.0	HlyD family efflux transporter periplasmic adaptor subunit
LRK54_RS02845		-0.5	-2.0	virulence RhuM family protein
LRK54_RS02945		-0.5	-3.5	response regulator
LRK54_RS16855		-0.5	-2.8	hypothetical protein
LRK54_RS02840		-0.5	-1.3	restriction endonuclease subunit S
LRK54_RS04025		-0.5	-0.3	diacylglycerol kinase
LRK54_RS00305		-0.5	-2.1	asparagine synthase B
LRK54_RS02885		-0.5	-3.1	RNA polymerase-associated protein RapA
LRK54_RS06480		-0.5	-2.5	lipoyl(octanoyl) transferase LipB
LRK54_RS16645		-0.5	-1.6	Smr/MutS family protein
LRK54_RS03320		-0.5	-1.4	ribonuclease HII
LRK54_RS15135		-0.5	-2.6	bifunctional ADP-dependent NAD(P)H-hydrate dehydratase/NAD(P)H-hydrate epimerase
LRK54_RS08385		-0.5	-1.4	GntR family transcriptional regulator
LRK54_RS17815		-0.5	-1.3	mercuric resistance transcriptional repressor protein MerD
LRK54_RS15565		-0.5	-1.3	glutathione S-transferase family protein
LRK54_RS14860		-0.5	-1.4	NAD(P)-binding domain-containing protein
LRK54_RS14785		-0.5	-1.3	NADH:flavin oxidoreductase/NADH oxidase
LRK54_RS00285		-0.5	-2.1	PaaI family thioesterase
LRK54_RS00030		-0.5	-2.3	virulence protein RhuM/Fic/DOC family protein
LRK54_RS11910		-0.5	-1.7	hypothetical protein
LRK54_RS11290		-0.5	-0.4	dihydrolipoyllysine-residue acetyltransferase
LRK54_RS15210		-0.5	-3.7	excinuclease ABC subunit UvrA
LRK54_RS04245		-0.5	-0.9	BON domain-containing protein
LRK54_RS13530		-0.5	-1.9	flagellar motor switch protein FliM
LRK54_RS03045		-0.5	-2.7	MipA/OmpV family protein
LRK54_RS10330		-0.5	-0.9	3-isopropylmalate dehydratase small subunit
LRK54_RS16765		-0.5	-2.5	hydroxyacylglutathione hydrolase
LRK54_RS01580		-0.5	-1.8	imidazole glycerol phosphate synthase subunit HisF
LRK54_RS00320		-0.5	-0.3	phosphoglycerate mutase
LRK54_RS05300		-0.5	-1.0	homoserine dehydrogenase
LRK54_RS15240		-0.5	-2.3	FTR1 family protein
LRK54_RS13615		-0.5	-1.7	DUF2802 domain-containing protein
LRK54_RS17125		-0.5	-2.3	ABC transporter transmembrane domain-containing protein
LRK54_RS01535		-0.5	-1.4	high-potential iron-sulfur protein
LRK54_RS14335		-0.5	-2.1	lipoate--protein ligase family protein
LRK54_RS06530		-0.5	-4.0	carbohydrate kinase family protein
LRK54_RS06040		-0.5	-1.5	LysM peptidoglycan-binding domain-containing protein
LRK54_RS01385		-0.4	-2.4	metalloregulator ArsR/SmtB family transcription factor
LRK54_RS00250		-0.4	-2.1	transcriptional repressor LexA
LRK54_RS07980		-0.4	-0.8	nitrogen regulation protein NR(I)
LRK54_RS14345		-0.4	-1.3	SDR family oxidoreductase
LRK54_RS00210		-0.4	-3.0	cyclin-dependent kinase inhibitor 3 family protein
LRK54_RS05260		-0.4	-1.5	hypothetical protein
LRK54_RS11965		-0.4	-2.5	Rieske 2Fe-2S domain-containing protein
LRK54_RS18025		-0.4	-2.2	acyl-CoA-binding protein

Specific Phenotypes

For 1 genes in this experiment