Experiment set12S642 for Rhodanobacter denitrificans FW104-10B01

Compare to:

2A-T1

200 most detrimental genes:

  gene name fitness t score description  
LRK54_RS05110 +2.1 1.9 glycosyltransferase family 4 protein compare
LRK54_RS15325 +1.1 0.9 hypothetical protein compare
LRK54_RS17400 +1.1 1.0 hypothetical protein compare
LRK54_RS05275 +1.1 1.5 type II toxin-antitoxin system RelE/ParE family toxin compare
LRK54_RS10075 +1.1 2.2 tetratricopeptide repeat protein compare
LRK54_RS05060 +1.1 1.5 carbohydrate kinase compare
LRK54_RS04365 +0.9 0.8 H-NS histone family protein compare
LRK54_RS15485 +0.9 1.0 hypothetical protein compare
LRK54_RS15500 +0.9 1.4 hypothetical protein compare
LRK54_RS12055 +0.9 1.3 dipeptide epimerase compare
LRK54_RS04315 +0.9 1.8 WGR domain-containing protein compare
LRK54_RS09455 +0.8 2.2 RNA polymerase sigma factor compare
LRK54_RS02805 +0.8 1.2 thioredoxin compare
LRK54_RS04820 +0.7 0.8 GspH/FimT family pseudopilin compare
LRK54_RS00490 +0.7 0.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
LRK54_RS05365 +0.7 1.6 MarR family transcriptional regulator compare
LRK54_RS17660 +0.7 1.8 hypothetical protein compare
LRK54_RS06255 +0.7 1.5 YbaN family protein compare
LRK54_RS15650 +0.6 1.5 AzlC family ABC transporter permease compare
LRK54_RS13515 +0.6 1.0 flagellar export protein FliJ compare
LRK54_RS04185 +0.6 0.8 chemotaxis protein CheW compare
LRK54_RS10740 +0.6 1.1 Lrp/AsnC family transcriptional regulator compare
LRK54_RS00015 +0.6 1.0 hypothetical protein compare
LRK54_RS02865 +0.6 0.5 type II toxin-antitoxin system HicA family toxin compare
LRK54_RS15780 +0.6 1.8 2'-5' RNA ligase family protein compare
LRK54_RS10005 +0.6 1.8 general secretion pathway protein GspN compare
LRK54_RS07625 +0.5 3.0 TolC family protein compare
LRK54_RS05900 +0.5 1.5 VOC family protein compare
LRK54_RS03765 +0.5 1.0 hypothetical protein compare
LRK54_RS11840 +0.5 4.5 PilN domain-containing protein compare
LRK54_RS10485 +0.5 1.7 type II toxin-antitoxin system RelE/ParE family toxin compare
LRK54_RS15765 +0.5 0.6 hypothetical protein compare
LRK54_RS09785 +0.5 2.7 YdcF family protein compare
LRK54_RS10270 +0.5 1.2 ComF family protein compare
LRK54_RS04085 +0.5 4.2 HAMP domain-containing histidine kinase compare
LRK54_RS16270 +0.5 2.6 hypothetical protein compare
LRK54_RS08945 +0.5 2.6 hypothetical protein compare
LRK54_RS16740 +0.5 0.5 HU family DNA-binding protein compare
LRK54_RS07990 +0.5 1.9 conjugal transfer protein TraR compare
LRK54_RS16265 +0.5 1.6 multidrug resistance efflux transporter family protein compare
LRK54_RS13610 +0.5 2.1 chemotaxis protein CheW compare
LRK54_RS09340 +0.5 2.1 hypothetical protein compare
LRK54_RS01910 +0.5 1.0 hypothetical protein compare
LRK54_RS07540 +0.5 1.8 DUF2878 domain-containing protein compare
LRK54_RS06960 +0.5 1.2 hypothetical protein compare
LRK54_RS13025 +0.5 1.4 hypothetical protein compare
LRK54_RS03960 +0.4 1.4 A24 family peptidase compare
LRK54_RS17705 +0.4 2.3 dynamin family protein compare
LRK54_RS03945 +0.4 3.9 type IV-A pilus assembly ATPase PilB compare
LRK54_RS05810 +0.4 0.7 membrane protein compare
LRK54_RS11230 +0.4 0.6 universal stress protein compare
LRK54_RS05990 +0.4 2.3 hypothetical protein compare
LRK54_RS05090 +0.4 2.7 serine kinase compare
LRK54_RS06170 +0.4 1.4 prolyl oligopeptidase family serine peptidase compare
LRK54_RS12610 +0.4 1.9 PhzF family phenazine biosynthesis protein compare
LRK54_RS13755 +0.4 3.7 lytic transglycosylase domain-containing protein compare
LRK54_RS11835 +0.4 3.2 pilus assembly protein PilM compare
LRK54_RS02490 +0.4 3.4 EAL domain-containing protein compare
LRK54_RS16555 +0.4 2.1 patatin-like phospholipase family protein compare
LRK54_RS15455 +0.4 0.7 DinB family protein compare
LRK54_RS17335 +0.4 1.7 hypothetical protein compare
LRK54_RS01135 +0.4 2.9 PilZ domain-containing protein compare
LRK54_RS01220 +0.4 1.7 AAA family ATPase compare
LRK54_RS12850 +0.4 1.1 HPr family phosphocarrier protein compare
LRK54_RS13405 +0.4 1.2 flagellar basal body rod protein FlgB compare
LRK54_RS07455 +0.4 1.2 hypothetical protein compare
LRK54_RS09735 +0.4 1.0 hydroxymyristoyl-ACP dehydratase compare
LRK54_RS11620 +0.4 1.5 hypothetical protein compare
LRK54_RS06915 +0.4 1.6 hypothetical protein compare
LRK54_RS03835 +0.4 1.4 RNA polymerase sigma factor compare
LRK54_RS06225 +0.4 0.6 hypothetical protein compare
LRK54_RS17965 +0.4 2.1 heat-inducible transcriptional repressor HrcA compare
LRK54_RS16590 +0.4 1.7 carboxymuconolactone decarboxylase family protein compare
LRK54_RS01705 +0.4 3.3 fimbrial protein FimV compare
LRK54_RS11255 +0.4 1.7 DUF2383 domain-containing protein compare
LRK54_RS11845 +0.4 3.1 type 4a pilus biogenesis protein PilO compare
LRK54_RS00345 +0.4 0.4 TraB/GumN family protein compare
LRK54_RS09125 +0.4 1.2 hypothetical protein compare
LRK54_RS14970 +0.4 1.3 hypothetical protein compare
LRK54_RS17550 +0.4 0.9 P-II family nitrogen regulator compare
LRK54_RS13285 +0.4 2.1 ThiF family adenylyltransferase compare
LRK54_RS14655 +0.4 1.0 peptide-methionine (R)-S-oxide reductase MsrB compare
LRK54_RS11855 +0.4 3.2 type IV pilus secretin PilQ compare
LRK54_RS10300 +0.4 2.0 threonine ammonia-lyase, biosynthetic compare
LRK54_RS08230 +0.3 0.8 hypothetical protein compare
LRK54_RS00525 +0.3 1.1 hypothetical protein compare
LRK54_RS13185 +0.3 1.8 glycosyltransferase family 4 protein compare
LRK54_RS02710 +0.3 0.3 pentapeptide MXKDX repeat protein compare
LRK54_RS05125 +0.3 1.8 class I SAM-dependent methyltransferase compare
LRK54_RS00865 +0.3 1.2 ABC transporter ATP-binding protein compare
LRK54_RS02035 +0.3 1.5 GNAT family N-acetyltransferase compare
LRK54_RS09770 +0.3 1.6 glycosyltransferase family 2 protein compare
LRK54_RS10305 +0.3 0.7 acetolactate synthase, regulatory subunit (EC 2.2.1.6) (from data) compare
LRK54_RS16800 +0.3 0.7 hypothetical protein compare
LRK54_RS14745 +0.3 1.3 peptidylprolyl isomerase compare
LRK54_RS15585 +0.3 1.2 GGDEF domain-containing protein compare
LRK54_RS11700 +0.3 0.7 cytochrome bd-I oxidase subunit CydX compare
LRK54_RS17865 +0.3 0.9 Hg(II)-responsive transcriptional regulator compare
LRK54_RS15555 +0.3 0.6 YciI family protein compare
LRK54_RS03440 +0.3 1.9 3-deoxy-7-phosphoheptulonate synthase class II compare
LRK54_RS12520 +0.3 1.9 hypothetical protein compare
LRK54_RS03820 +0.3 1.4 hypothetical protein compare
LRK54_RS07985 +0.3 1.2 ATP-binding protein compare
LRK54_RS15970 +0.3 0.7 DUF4190 domain-containing protein compare
LRK54_RS05240 +0.3 1.3 YceI family protein compare
LRK54_RS06055 +0.3 1.4 hypothetical protein compare
LRK54_RS02065 +0.3 1.1 GNAT family N-acetyltransferase compare
LRK54_RS09760 +0.3 1.3 3-oxoacyl-ACP reductase FabG compare
LRK54_RS03950 +0.3 2.5 type II secretion system F family protein compare
LRK54_RS06220 +0.3 1.3 tRNA (N6-threonylcarbamoyladenosine(37)-N6)-methyltransferase TrmO compare
LRK54_RS17575 +0.3 1.5 hypothetical protein compare
LRK54_RS07465 +0.3 1.6 succinate dehydrogenase, cytochrome b556 subunit compare
LRK54_RS08060 +0.3 1.4 response regulator transcription factor compare
LRK54_RS05915 +0.3 1.2 hypothetical protein compare
LRK54_RS14950 +0.3 1.0 DUF4852 domain-containing protein compare
LRK54_RS16470 +0.3 0.8 metalloregulator ArsR/SmtB family transcription factor compare
LRK54_RS12920 +0.3 1.3 hypothetical protein compare
LRK54_RS01320 +0.3 1.3 zinc-dependent alcohol dehydrogenase family protein compare
LRK54_RS01295 +0.3 0.2 DUF6165 family protein compare
LRK54_RS14635 +0.3 1.4 LysE family translocator compare
LRK54_RS17695 +0.3 1.3 DUF2127 domain-containing protein compare
LRK54_RS15540 +0.3 1.0 helix-turn-helix transcriptional regulator compare
LRK54_RS08820 +0.3 1.7 hypothetical protein compare
LRK54_RS15655 +0.3 1.0 AzlD domain-containing protein compare
LRK54_RS10285 +0.3 2.1 hypothetical protein compare
LRK54_RS14875 +0.3 2.0 TIR domain-containing protein compare
LRK54_RS10325 +0.3 1.7 3-isopropylmalate dehydrogenase compare
LRK54_RS09505 +0.3 1.6 RNA polymerase sigma factor compare
LRK54_RS01315 +0.3 1.1 BON domain-containing protein compare
LRK54_RS17420 +0.3 1.5 bifunctional enoyl-CoA hydratase/phosphate acetyltransferase compare
LRK54_RS07385 +0.3 1.2 isochorismatase family protein compare
LRK54_RS01960 +0.3 1.3 ribose-phosphate pyrophosphokinase compare
LRK54_RS17645 +0.3 1.6 SNF2-related protein compare
LRK54_RS00620 +0.3 0.3 FtsH protease activity modulator HflK compare
LRK54_RS15925 +0.3 0.4 carboxymuconolactone decarboxylase family protein compare
LRK54_RS07260 +0.3 1.3 tetratricopeptide repeat protein compare
LRK54_RS15735 +0.3 1.4 MarR family transcriptional regulator compare
LRK54_RS15605 +0.3 0.6 hypothetical protein compare
LRK54_RS14135 +0.3 1.4 PepSY domain-containing protein compare
LRK54_RS00080 +0.3 0.6 helix-turn-helix domain-containing protein compare
LRK54_RS00670 +0.3 0.2 OmpA family protein compare
LRK54_RS01985 +0.3 1.5 copper resistance protein B compare
LRK54_RS12490 +0.3 1.6 hypothetical protein compare
LRK54_RS04895 +0.3 1.1 tol-pal system-associated acyl-CoA thioesterase compare
LRK54_RS17160 +0.3 0.3 Eco57I restriction-modification methylase domain-containing protein compare
LRK54_RS15730 +0.3 1.0 organic hydroperoxide resistance protein compare
LRK54_RS00085 +0.3 0.1 tetratricopeptide repeat protein compare
LRK54_RS06065 +0.3 1.5 hypothetical protein compare
LRK54_RS03915 +0.3 1.3 glycosyltransferase family 2 protein compare
LRK54_RS17390 +0.3 0.9 low molecular weight phosphotyrosine protein phosphatase compare
LRK54_RS08025 +0.3 0.8 NAD(P)-dependent oxidoreductase compare
LRK54_RS02210 +0.3 1.6 type IV pilus modification protein PilV compare
LRK54_RS09020 +0.3 1.8 TolC family protein compare
LRK54_RS02300 +0.3 1.2 glutathione S-transferase family protein compare
LRK54_RS07905 +0.3 1.3 DUF4142 domain-containing protein compare
LRK54_RS10045 +0.3 1.5 TIGR03862 family flavoprotein compare
LRK54_RS04195 +0.3 1.5 twitching motility response regulator PilG compare
LRK54_RS15685 +0.3 2.0 acyl-CoA dehydrogenase family protein compare
LRK54_RS18055 +0.3 0.1 glycosyltransferase family 4 protein compare
LRK54_RS17505 +0.3 0.1 preprotein translocase subunit SecG compare
LRK54_RS17905 +0.3 0.1 NfuA family Fe-S biogenesis protein compare
LRK54_RS05130 +0.3 1.7 amidohydrolase family protein compare
LRK54_RS05075 +0.3 1.7 non-homologous end-joining DNA ligase compare
LRK54_RS03070 +0.3 1.3 2-dehydropantoate 2-reductase compare
LRK54_RS05030 +0.3 2.0 ABC transporter permease compare
LRK54_RS10435 +0.3 1.7 glycerophosphodiester phosphodiesterase compare
LRK54_RS01870 +0.3 1.6 hypothetical protein compare
LRK54_RS14845 +0.3 0.3 LysR family transcriptional regulator compare
LRK54_RS05220 +0.3 1.3 MFS transporter compare
LRK54_RS04175 +0.3 2.3 Hpt domain-containing protein compare
LRK54_RS01730 +0.3 1.3 GNAT family N-acetyltransferase compare
LRK54_RS00615 +0.3 0.3 protease modulator HflC compare
LRK54_RS14285 +0.3 1.1 ABC transporter permease compare
LRK54_RS00440 +0.3 0.2 high frequency lysogenization protein HflD compare
LRK54_RS05490 +0.3 1.1 energy transducer TonB compare
LRK54_RS11850 +0.3 2.1 pilus assembly protein PilP compare
LRK54_RS11325 +0.3 1.4 trimeric intracellular cation channel family protein compare
LRK54_RS00420 +0.3 0.4 ATP-dependent Clp protease ATP-binding subunit ClpA compare
LRK54_RS07105 +0.3 1.5 twin transmembrane helix small protein compare
LRK54_RS09865 +0.3 0.4 CRISPR-associated endonuclease Cas2 compare
LRK54_RS10225 +0.3 1.2 DNA-3-methyladenine glycosylase I compare
LRK54_RS17685 +0.3 1.0 heavy metal sensor histidine kinase compare
LRK54_RS05085 +0.3 1.7 peroxiredoxin compare
LRK54_RS07375 +0.3 2.0 3-isopropylmalate dehydratase large subunit compare
LRK54_RS09360 +0.3 0.5 RNA polymerase sigma factor compare
LRK54_RS05460 +0.3 1.7 CBS domain-containing protein compare
LRK54_RS13425 +0.3 0.6 flagellar basal-body rod protein FlgF compare
LRK54_RS12720 +0.3 1.2 hypothetical protein compare
LRK54_RS00695 +0.3 0.2 methylisocitrate lyase compare
LRK54_RS13895 +0.2 0.5 putative zinc-binding protein compare
LRK54_RS00800 +0.2 1.1 PilZ domain-containing protein compare
LRK54_RS03920 +0.2 0.4 hypothetical protein compare
LRK54_RS15755 +0.2 1.3 ABC transporter ATP-binding protein compare
LRK54_RS06090 +0.2 1.5 DUF4255 domain-containing protein compare
LRK54_RS15760 +0.2 1.7 ABC transporter permease compare
LRK54_RS07750 +0.2 0.8 DUF302 domain-containing protein compare
LRK54_RS16460 +0.2 1.0 hypothetical protein compare
LRK54_RS01720 +0.2 0.3 hydroxyacid dehydrogenase compare
LRK54_RS15530 +0.2 1.3 YciI family protein compare
LRK54_RS13925 +0.2 0.8 deoxyribose-phosphate aldolase compare


Specific Phenotypes

For 1 genes in this experiment