Experiment set12S639 for Rhodanobacter denitrificans FW104-10B01

Compare to:

1C-T1

200 most detrimental genes:

  gene name fitness t score description  
LRK54_RS01395 +2.1 2.2 arsenate reductase ArsC compare
LRK54_RS04365 +2.0 2.1 H-NS histone family protein compare
LRK54_RS17400 +1.8 1.9 hypothetical protein compare
LRK54_RS00490 +1.6 1.8 23S rRNA (guanosine(2251)-2'-O)-methyltransferase RlmB compare
LRK54_RS03700 +1.2 2.2 4-(cytidine 5'-diphospho)-2-C-methyl-D-erythritol kinase compare
LRK54_RS13675 +1.1 1.7 methyl-accepting chemotaxis protein compare
LRK54_RS10660 +1.1 1.0 DUF4156 domain-containing protein compare
LRK54_RS04820 +1.1 1.3 GspH/FimT family pseudopilin compare
LRK54_RS15720 +1.0 1.4 ATP-binding cassette domain-containing protein compare
LRK54_RS13540 +1.0 1.5 flagellar biosynthetic protein FliO compare
LRK54_RS15820 +0.9 1.5 hypothetical protein compare
LRK54_RS17435 +0.9 1.9 nucleoside diphosphate kinase regulator compare
LRK54_RS15765 +0.8 1.1 hypothetical protein compare
LRK54_RS07750 +0.8 3.1 DUF302 domain-containing protein compare
LRK54_RS12735 +0.8 1.2 NAD-dependent epimerase/dehydratase family protein compare
LRK54_RS14580 +0.8 0.8 hypothetical protein compare
LRK54_RS03920 +0.8 1.2 hypothetical protein compare
LRK54_RS15555 +0.8 1.3 YciI family protein compare
LRK54_RS17080 +0.8 1.5 hypothetical protein compare
LRK54_RS02710 +0.7 0.7 pentapeptide MXKDX repeat protein compare
LRK54_RS15810 +0.7 1.7 hypothetical protein compare
LRK54_RS15485 +0.7 0.7 hypothetical protein compare
LRK54_RS15650 +0.7 2.1 AzlC family ABC transporter permease compare
LRK54_RS17560 +0.7 2.3 efflux RND transporter periplasmic adaptor subunit compare
LRK54_RS05330 +0.7 3.2 aminopeptidase P family protein compare
LRK54_RS01630 +0.7 2.9 cation diffusion facilitator family transporter compare
LRK54_RS16655 +0.6 0.8 protein-L-isoaspartate(D-aspartate) O-methyltransferase compare
LRK54_RS12995 +0.6 1.4 MGMT family protein compare
LRK54_RS17160 +0.6 0.8 Eco57I restriction-modification methylase domain-containing protein compare
LRK54_RS15455 +0.6 1.0 DinB family protein compare
LRK54_RS09545 +0.6 3.1 hypothetical protein compare
LRK54_RS03110 +0.6 0.8 nucleotidyltransferase family protein compare
LRK54_RS03125 +0.6 0.3 preprotein translocase subunit YajC compare
LRK54_RS03290 +0.6 0.3 RIP metalloprotease RseP compare
LRK54_RS05805 +0.6 1.5 thiol peroxidase compare
LRK54_RS02895 +0.6 0.5 rhomboid family intramembrane serine protease compare
LRK54_RS00820 +0.6 2.1 arsenate reductase (glutaredoxin) compare
LRK54_RS12675 +0.6 2.4 hypothetical protein compare
LRK54_RS07540 +0.6 2.3 DUF2878 domain-containing protein compare
LRK54_RS15025 +0.6 1.8 phosphate regulon sensor histidine kinase PhoR compare
LRK54_RS09525 +0.5 1.9 DUF2282 domain-containing protein compare
LRK54_RS14490 +0.5 1.6 ABC transporter ATP-binding protein compare
LRK54_RS06280 +0.5 0.9 alpha/beta hydrolase compare
LRK54_RS00440 +0.5 0.5 high frequency lysogenization protein HflD compare
LRK54_RS13330 +0.5 2.4 hypothetical protein compare
LRK54_RS02380 +0.5 0.8 argininosuccinate lyase compare
LRK54_RS03710 +0.5 0.6 tetratricopeptide repeat protein compare
LRK54_RS15325 +0.5 0.4 hypothetical protein compare
LRK54_RS02275 +0.5 0.6 enoyl-CoA hydratase-related protein compare
LRK54_RS15585 +0.5 2.0 GGDEF domain-containing protein compare
LRK54_RS11890 +0.5 1.0 O-acetyl-ADP-ribose deacetylase compare
LRK54_RS15655 +0.5 1.7 AzlD domain-containing protein compare
LRK54_RS13370 +0.5 3.3 hypothetical protein compare
LRK54_RS13515 +0.5 0.9 flagellar export protein FliJ compare
LRK54_RS04305 +0.5 0.8 shikimate kinase compare
LRK54_RS00085 +0.5 0.2 tetratricopeptide repeat protein compare
LRK54_RS05235 +0.5 2.5 cytochrome b compare
LRK54_RS12915 +0.5 2.1 hypothetical protein compare
LRK54_RS04085 +0.5 3.9 HAMP domain-containing histidine kinase compare
LRK54_RS03675 +0.5 0.3 redox-regulated ATPase YchF compare
LRK54_RS00615 +0.5 0.5 protease modulator HflC compare
LRK54_RS00405 +0.5 0.8 FHA domain-containing protein compare
LRK54_RS00670 +0.5 0.3 OmpA family protein compare
LRK54_RS02445 +0.5 0.4 membrane protein insertion efficiency factor YidD compare
LRK54_RS01535 +0.5 1.6 high-potential iron-sulfur protein compare
LRK54_RS14000 +0.5 1.5 nitrate reductase molybdenum cofactor assembly chaperone compare
LRK54_RS07670 +0.5 2.4 hypothetical protein compare
LRK54_RS00620 +0.5 0.3 FtsH protease activity modulator HflK compare
LRK54_RS17655 +0.5 2.3 histidine phosphatase family protein compare
LRK54_RS02680 +0.5 1.6 CPBP family intramembrane metalloprotease compare
LRK54_RS00080 +0.5 1.0 helix-turn-helix domain-containing protein compare
LRK54_RS01745 +0.5 2.0 hypothetical protein compare
LRK54_RS00675 +0.5 0.4 bifunctional 2-methylcitrate dehydratase/aconitate hydratase compare
LRK54_RS07435 +0.5 1.9 aspartate/glutamate racemase family protein compare
LRK54_RS18055 +0.5 0.3 glycosyltransferase family 4 protein compare
LRK54_RS16360 +0.5 0.5 NAD(+)--rifampin ADP-ribosyltransferase compare
LRK54_RS00420 +0.5 0.5 ATP-dependent Clp protease ATP-binding subunit ClpA compare
LRK54_RS07915 +0.5 2.2 hypothetical protein compare
LRK54_RS01805 +0.5 2.1 NAD(P)H-dependent oxidoreductase compare
LRK54_RS02035 +0.4 1.8 GNAT family N-acetyltransferase compare
LRK54_RS01295 +0.4 0.3 DUF6165 family protein compare
LRK54_RS10045 +0.4 2.5 TIGR03862 family flavoprotein compare
LRK54_RS07905 +0.4 2.0 DUF4142 domain-containing protein compare
LRK54_RS02460 +0.4 0.5 phosphoglycolate phosphatase compare
LRK54_RS00150 +0.4 1.5 hypothetical protein compare
LRK54_RS15105 +0.4 1.7 polynucleotide adenylyltransferase PcnB compare
LRK54_RS00695 +0.4 0.3 methylisocitrate lyase compare
LRK54_RS17505 +0.4 0.2 preprotein translocase subunit SecG compare
LRK54_RS17905 +0.4 0.2 NfuA family Fe-S biogenesis protein compare
LRK54_RS01345 +0.4 1.1 CvpA family protein compare
LRK54_RS02855 +0.4 0.4 type I restriction-modification system subunit M compare
LRK54_RS10005 +0.4 1.3 general secretion pathway protein GspN compare
LRK54_RS00345 +0.4 0.4 TraB/GumN family protein compare
LRK54_RS04755 +0.4 1.3 hypothetical protein compare
LRK54_RS15540 +0.4 1.4 helix-turn-helix transcriptional regulator compare
LRK54_RS04445 +0.4 0.7 ABC transporter ATP-binding protein compare
LRK54_RS01845 +0.4 1.6 RnfABCDGE type electron transport complex subunit B compare
LRK54_RS05460 +0.4 2.7 CBS domain-containing protein compare
LRK54_RS17460 +0.4 1.9 DUF2461 domain-containing protein compare
LRK54_RS02535 +0.4 0.3 50S ribosomal protein L9 compare
LRK54_RS17390 +0.4 1.3 low molecular weight phosphotyrosine protein phosphatase compare
LRK54_RS09980 +0.4 1.6 prepilin-type N-terminal cleavage/methylation domain-containing protein compare
LRK54_RS02390 +0.4 1.6 acetylglutamate kinase compare
LRK54_RS14290 +0.4 1.7 ABC transporter ATP-binding protein compare
LRK54_RS00690 +0.4 1.0 2-methylcitrate synthase compare
LRK54_RS12350 +0.4 2.3 dienelactone hydrolase family protein compare
LRK54_RS07040 +0.4 1.7 GatB/YqeY domain-containing protein compare
LRK54_RS04940 +0.4 0.8 zinc ribbon domain-containing protein compare
LRK54_RS07985 +0.4 1.3 ATP-binding protein compare
LRK54_RS17830 +0.4 0.4 mercury resistance system periplasmic binding protein MerP compare
LRK54_RS14800 +0.4 0.4 cytochrome c compare
LRK54_RS15695 +0.4 1.4 hypothetical protein compare
LRK54_RS05030 +0.4 2.9 ABC transporter permease compare
LRK54_RS14725 +0.4 1.6 MetQ/NlpA family ABC transporter substrate-binding protein compare
LRK54_RS00775 +0.4 0.7 translational GTPase TypA compare
LRK54_RS02065 +0.4 1.3 GNAT family N-acetyltransferase compare
LRK54_RS09770 +0.4 1.8 glycosyltransferase family 2 protein compare
LRK54_RS02440 +0.4 0.2 RNA polymerase-binding protein DksA compare
LRK54_RS18050 +0.4 0.5 lipopolysaccharide assembly protein LapB compare
LRK54_RS04660 +0.4 2.3 DUF4197 domain-containing protein compare
LRK54_RS12330 +0.4 1.0 cob(I)yrinic acid a,c-diamide adenosyltransferase compare
LRK54_RS11840 +0.4 3.2 PilN domain-containing protein compare
LRK54_RS01460 +0.4 1.2 barstar family protein compare
LRK54_RS13890 +0.4 0.5 hypothetical protein compare
LRK54_RS14445 +0.4 1.5 putative cation transport regulator ChaB compare
LRK54_RS05130 +0.4 2.4 amidohydrolase family protein compare
LRK54_RS17665 +0.4 1.9 glycosyltransferase compare
LRK54_RS03895 +0.4 0.7 lipopolysaccharide biosynthesis protein compare
LRK54_RS15575 +0.4 1.0 DUF3224 domain-containing protein compare
LRK54_RS17385 +0.4 2.7 Vi polysaccharide biosynthesis UDP-N-acetylglucosamine C-6 dehydrogenase TviB compare
LRK54_RS00815 +0.4 0.5 pseudouridine synthase compare
LRK54_RS00865 +0.4 1.2 ABC transporter ATP-binding protein compare
LRK54_RS17270 +0.4 0.2 DNA translocase FtsK compare
LRK54_RS09125 +0.4 1.3 hypothetical protein compare
LRK54_RS03405 +0.4 0.5 ribonuclease G compare
LRK54_RS12650 +0.4 2.3 DUF1801 domain-containing protein compare
LRK54_RS16940 +0.4 0.2 RNA polymerase sigma factor RpoE compare
LRK54_RS15780 +0.4 1.1 2'-5' RNA ligase family protein compare
LRK54_RS11480 +0.4 1.8 dipeptidase compare
LRK54_RS02090 +0.4 0.4 NAD-glutamate dehydrogenase compare
LRK54_RS00635 +0.4 0.2 tRNA (adenosine(37)-N6)-dimethylallyltransferase MiaA compare
LRK54_RS07470 +0.4 1.9 succinate dehydrogenase, hydrophobic membrane anchor protein compare
LRK54_RS13755 +0.4 3.3 lytic transglycosylase domain-containing protein compare
LRK54_RS03930 +0.4 1.1 glycosyltransferase family 2 protein compare
LRK54_RS13365 +0.4 1.7 MBL fold metallo-hydrolase compare
LRK54_RS07645 +0.4 2.0 alpha/beta hydrolase compare
LRK54_RS00320 +0.4 0.4 phosphoglycerate mutase compare
LRK54_RS15905 +0.4 1.8 cation transporter compare
LRK54_RS04195 +0.4 1.8 twitching motility response regulator PilG compare
LRK54_RS15515 +0.4 1.5 NAD(P)H-dependent oxidoreductase compare
LRK54_RS12390 +0.4 2.3 low-specificity L-threonine aldolase compare
LRK54_RS09485 +0.4 1.6 TIGR04283 family arsenosugar biosynthesis glycosyltransferase compare
LRK54_RS11520 +0.4 1.3 transpeptidase compare
LRK54_RS03860 +0.4 1.4 nitroreductase compare
LRK54_RS07660 +0.4 3.1 glycoside hydrolase family 3 C-terminal domain-containing protein compare
LRK54_RS07620 +0.4 1.8 efflux RND transporter periplasmic adaptor subunit compare
LRK54_RS12610 +0.4 1.6 PhzF family phenazine biosynthesis protein compare
LRK54_RS05110 +0.3 0.2 glycosyltransferase family 4 protein compare
LRK54_RS01950 +0.3 2.2 MBL fold metallo-hydrolase compare
LRK54_RS02490 +0.3 2.8 EAL domain-containing protein compare
LRK54_RS05085 +0.3 2.2 peroxiredoxin compare
LRK54_RS00735 +0.3 1.4 YidB family protein compare
LRK54_RS03105 +0.3 0.8 phosphotransferase compare
LRK54_RS12500 +0.3 2.0 DUF58 domain-containing protein compare
LRK54_RS14055 +0.3 0.9 prephenate dehydrogenase/arogenate dehydrogenase family protein compare
LRK54_RS02070 +0.3 0.4 acyl-CoA dehydrogenase family protein compare
LRK54_RS15750 +0.3 2.4 Na+/H+ antiporter compare
LRK54_RS15525 +0.3 1.8 FAD-containing oxidoreductase compare
LRK54_RS12440 +0.3 2.1 RNB domain-containing ribonuclease compare
LRK54_RS12700 +0.3 1.4 hypothetical protein compare
LRK54_RS16865 +0.3 0.7 protein phosphatase 2C domain-containing protein compare
LRK54_RS16350 +0.3 0.5 helix-turn-helix domain-containing protein compare
LRK54_RS05325 +0.3 1.7 DUF1304 domain-containing protein compare
LRK54_RS01730 +0.3 1.6 GNAT family N-acetyltransferase compare
LRK54_RS18060 +0.3 0.4 polysaccharide biosynthesis protein compare
LRK54_RS16660 +0.3 0.4 VTT domain-containing protein compare
LRK54_RS08045 +0.3 1.6 DoxX family protein compare
LRK54_RS14590 +0.3 0.3 N-acetylmuramoyl-L-alanine amidase compare
LRK54_RS02325 +0.3 0.2 SDR family oxidoreductase compare
LRK54_RS07805 +0.3 2.8 insulinase family protein compare
LRK54_RS11620 +0.3 1.3 hypothetical protein compare
LRK54_RS16730 +0.3 0.2 ATP-dependent Clp protease ATP-binding subunit ClpX compare
LRK54_RS07330 +0.3 2.4 hypothetical protein compare
LRK54_RS05040 +0.3 2.2 response regulator compare
LRK54_RS15570 +0.3 1.6 MFS transporter compare
LRK54_RS17660 +0.3 0.8 hypothetical protein compare
LRK54_RS15510 +0.3 1.6 MnmC family methyltransferase compare
LRK54_RS05915 +0.3 1.2 hypothetical protein compare
LRK54_RS16405 +0.3 1.3 VOC family protein compare
LRK54_RS16535 +0.3 1.6 VIT family protein compare
LRK54_RS05080 +0.3 2.4 ABC transporter ATP-binding protein/permease compare
LRK54_RS16795 +0.3 1.0 hypothetical protein compare
LRK54_RS07815 +0.3 1.7 MFS transporter compare
LRK54_RS00805 +0.3 0.2 segregation/condensation protein A compare
LRK54_RS08075 +0.3 1.5 hypothetical protein compare
LRK54_RS16755 +0.3 0.2 SurA N-terminal domain-containing protein compare
LRK54_RS15660 +0.3 1.9 hypothetical protein compare
LRK54_RS07780 +0.3 2.7 efflux transporter outer membrane subunit compare
LRK54_RS01785 +0.3 1.5 dienelactone hydrolase family protein compare
LRK54_RS09855 +0.3 2.1 LysM peptidoglycan-binding domain-containing protein compare


Specific Phenotypes

For 1 genes in this experiment